diff options
Diffstat (limited to 'test/classification-model.rb')
| -rw-r--r-- | test/classification-model.rb | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/test/classification-model.rb b/test/classification-model.rb index 79ccb98..c41b211 100644 --- a/test/classification-model.rb +++ b/test/classification-model.rb @@ -84,13 +84,19 @@ class ClassificationModelTest < MiniTest::Test assert_kind_of Dataset, result assert_equal 7, result.features.size assert_equal 85, result.compounds.size - prediction_feature = result.prediction_features.first + prediction_feature = result.prediction_feature assert_equal ["carcinogenic"], result.values(result.compounds[1], prediction_feature) assert_equal ["non-carcinogenic"], result.values(result.compounds[5], prediction_feature) assert_nil result.predictions[result.compounds.first][:value] assert_equal "carcinogenic", result.predictions[result.compounds[1]][:value] assert_equal 0.27, result.predictions[result.compounds[1]][:probabilities]["non-carcinogenic"].round(2) - assert_match /High/i, result.predictions[result.compounds[1]][:confidence] + assert_match /Similar/i, result.predictions[result.compounds[1]][:confidence] + csv = result.to_prediction_csv + rows = csv.split("\n") + assert_equal "ID,Original SMILES,Canonical SMILES,Prediction,Confidence,Probability: carcinogenic,Probability: non-carcinogenic,Measurements", rows[0] + items = rows[2].split(",") + assert_equal "carcinogenic", items[3] + assert_equal 0.27, items[6].to_f.round(2) # probabilities end def test_carcinogenicity_rf_classification |