diff options
Diffstat (limited to 'test/model-nanoparticle.rb')
| -rw-r--r-- | test/model-nanoparticle.rb | 5 |
1 files changed, 1 insertions, 4 deletions
diff --git a/test/model-nanoparticle.rb b/test/model-nanoparticle.rb index 7fb944e..8dc6830 100644 --- a/test/model-nanoparticle.rb +++ b/test/model-nanoparticle.rb @@ -5,10 +5,6 @@ class NanoparticleModelTest < MiniTest::Test def setup @training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - unless @training_dataset - Import::Enanomapper.import File.join(File.dirname(__FILE__),"data","enm") - @training_dataset = Dataset.where(name: "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - end @prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first end @@ -50,6 +46,7 @@ class NanoparticleModelTest < MiniTest::Test refute_empty model.independent_variables assert_equal "Algorithm::Caret.rf", model.algorithms[:prediction][:method] assert_equal "Algorithm::Similarity.tanimoto", model.algorithms[:similarity][:method] + assert_nil model.algorithms[:descriptors][:categories] nanoparticle = @training_dataset.nanoparticles[-34] assert_includes nanoparticle.dataset_ids, @training_dataset.id prediction = model.predict nanoparticle |