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Diffstat (limited to 'test/opentox-ruby-api-wrapper_test.rb')
| -rw-r--r-- | test/opentox-ruby-api-wrapper_test.rb | 47 |
1 files changed, 0 insertions, 47 deletions
diff --git a/test/opentox-ruby-api-wrapper_test.rb b/test/opentox-ruby-api-wrapper_test.rb deleted file mode 100644 index 0a394e2..0000000 --- a/test/opentox-ruby-api-wrapper_test.rb +++ /dev/null @@ -1,47 +0,0 @@ -require File.join(File.dirname(__FILE__), 'test_helper.rb') - -class OpentoxRubyApiWrapperTest < Test::Unit::TestCase - - def setup - if ENV['LOCAL'] - port = 5000 - [ "opentox-compound", "opentox-feature" , "opentox-dataset" , "opentox-fminer" , "opentox-lazar" ].each do |component| - ENV[component.upcase.gsub(/-/,'_')] = "http://localhost:#{port}/" - port += 1 - end - end - ENV['OPENTOX'] = "test" - end - - def test_create_dataset_and_model_and_make_a_prediction - dataset = OpenTox::Dataset.new :name => "Hamster Carcinogenicity", :filename => "test/hamster_carcinogenicity.csv" - puts dataset.uri - wait_for_completion dataset - assert_match(/#{ENV['OPENTOX_DATASET']}\d+$/,dataset.uri) - assert_equal("Hamster Carcinogenicity",dataset.name) - assert_equal(true,dataset.finished?) - lazar = OpenTox::Lazar.new :dataset_uri => dataset.uri - puts lazar.uri - wait_for_completion lazar - assert_equal(true,lazar.finished?) - assert_match(/#{ENV['OPENTOX_LAZAR']}model\/\d+$/,lazar.uri) - query_structure = OpenTox::Compound.new :smiles => 'c1ccccc1NN' - puts query_structure.uri - prediction = lazar.predict query_structure - puts prediction.uri - wait_for_completion prediction - puts prediction.classification - puts prediction.confidence - puts prediction.neighbors - puts prediction.features - assert_equal(true, prediction.classification) - assert_match(/0\.\d+/, prediction.confidence.to_s) - end - -end - -def wait_for_completion(object) - while (!object.finished?) - sleep 1 - end -end |