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-rw-r--r--test/descriptor.rb4
-rw-r--r--test/validation-classification.rb6
-rw-r--r--test/validation-nanoparticle.rb1
3 files changed, 8 insertions, 3 deletions
diff --git a/test/descriptor.rb b/test/descriptor.rb
index e5d8ff9..42d4661 100644
--- a/test/descriptor.rb
+++ b/test/descriptor.rb
@@ -12,7 +12,9 @@ class DescriptorTest < MiniTest::Test
def test_smarts
c = OpenTox::Compound.from_smiles "N=C=C1CCC(=F=FO)C1"
- File.open("tmp.png","w+"){|f| f.puts c.png}
+ File.open("/tmp/tmp.png","w+"){|f| f.puts c.png}
+ assert_match /^PNG/,`file -b /tmp/tmp.png`
+ File.delete "/tmp/tmp.png"
s = Smarts.find_or_create_by(:smarts => "F=F")
result = c.smarts_match [s]
assert_equal [1], result
diff --git a/test/validation-classification.rb b/test/validation-classification.rb
index c93e71f..fb4c3e7 100644
--- a/test/validation-classification.rb
+++ b/test/validation-classification.rb
@@ -11,8 +11,10 @@ class ValidationClassificationTest < MiniTest::Test
cv = ClassificationCrossValidation.create model
assert cv.accuracy > 0.7, "Accuracy (#{cv.accuracy}) should be larger than 0.7, this may occur due to an unfavorable training/test set split"
assert cv.weighted_accuracy > cv.accuracy, "Weighted accuracy (#{cv.weighted_accuracy}) should be larger than accuracy (#{cv.accuracy})."
- #p cv
- #File.open("tmp.pdf","w+"){|f| f.puts cv.probability_plot}
+ File.open("/tmp/tmp.pdf","w+"){|f| f.puts cv.probability_plot(format:"pdf")}
+ p `file -b /tmp/tmp.pdf`
+ File.open("/tmp/tmp.png","w+"){|f| f.puts cv.probability_plot(format:"png")}
+ p `file -b /tmp/tmp.png`
end
# parameters
diff --git a/test/validation-nanoparticle.rb b/test/validation-nanoparticle.rb
index c0f2f92..1742ef2 100644
--- a/test/validation-nanoparticle.rb
+++ b/test/validation-nanoparticle.rb
@@ -15,6 +15,7 @@ class NanoparticleValidationTest < MiniTest::Test
def test_validate_default_nanoparticle_model
model = Model::Lazar.create training_dataset: @training_dataset, prediction_feature: @prediction_feature
cv = CrossValidation.create model
+ p cv
p cv.rmse
p cv.r_squared
#File.open("tmp.pdf","w+"){|f| f.puts cv.correlation_plot}