From 99c42f76b02f9084d0757eb0c52b4a55fa295a95 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Fri, 11 Nov 2016 17:19:13 +0100 Subject: p-chem regression and enm import fixed --- lib/crossvalidation.rb | 1 + lib/model.rb | 31 +- test/data/enm/bundles.json | 263 ----- ...-FCSV-0542c513-7015-3169-a1c1-e00f811a7ba0.json | 299 ------ ...-FCSV-0588dd9b-6227-307f-9e6a-6b07d4717e8c.json | 247 ----- ...-FCSV-05f4c488-5326-3d8a-be41-c57c468b2fa4.json | 247 ----- ...-FCSV-064f1803-3b9e-3f44-a5f6-60b1f573830c.json | 247 ----- ...-FCSV-06c1d24b-426b-39ec-8047-700808302325.json | 247 ----- ...-FCSV-07629748-9b8e-381b-a4e6-79b495404e02.json | 181 ---- ...-FCSV-07ecc16e-528e-3904-bb96-0812dff8ea65.json | 233 ----- ...-FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465.json | 247 ----- ...-FCSV-0e958d54-f957-37d2-91d1-ee8d9961548e.json | 181 ---- ...-FCSV-0fe5f223-9c02-363c-a23c-70f1f36ffbec.json | 247 ----- ...-FCSV-1180669a-fc30-3bc1-b53e-6a200c4248e4.json | 247 ----- 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| 57 -- ...-NWKI-efd2642b-ae04-4bf4-a43e-d43799c9bdce.json | 58 -- ...-NWKI-f00c75cc-5a1b-47b5-8ae1-8ae1db6d98ae.json | 58 -- ...-NWKI-f083093f-b798-43b1-a9a5-774ca6a07ace.json | 58 -- ...-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json | 59 -- ...-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json | 63 -- ...-NWKI-f1c00d50-7b3c-4380-9611-7796fcb6605a.json | 58 -- ...-NWKI-f1e1f762-cb0e-4758-8242-9dbeba51898c.json | 58 -- ...-NWKI-f2c1af5b-2d28-4124-a88c-53fefaa4fff6.json | 58 -- ...-NWKI-f348dc52-e4ed-4222-8b25-8c60b5a9b082.json | 56 -- ...-NWKI-f34bd7ea-23f0-4914-9e8d-fc373f03a50e.json | 59 -- ...-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json | 61 -- ...-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json | 58 -- ...-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json | 56 -- ...-NWKI-f574b0be-00ea-4407-b36f-f23425acddc7.json | 53 - ...-NWKI-f5b23bcd-efc3-4a65-ab24-d34b0d2c6e92.json | 58 -- ...-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json | 57 -- 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-- ...-NWKI-f9da39f2-c4fe-4158-b508-d51ee55e8122.json | 92 -- ...-NWKI-fa7823ae-a58c-4fe5-82c5-cc4d9d952d9b.json | 61 -- ...-NWKI-fa9d23f2-583d-433a-8e54-b769125b6eac.json | 60 -- ...-NWKI-fb0daa9b-a135-4e67-80bb-58735b271757.json | 63 -- ...-NWKI-fc270c92-d071-4d31-b421-6639903b6777.json | 58 -- ...-NWKI-fc688bd6-96d8-4219-a59a-2b95903bea30.json | 58 -- ...-NWKI-fc6a8459-0f8c-4910-8e68-1628be59ff93.json | 62 -- ...-NWKI-fc98e120-6aeb-496f-ae14-dafbad45794a.json | 92 -- ...-NWKI-fd6b8b11-9ff1-4d65-be4b-ff9a0f15245f.json | 58 -- ...-NWKI-fda09e56-a29d-43ed-9863-8c0f8cbe0261.json | 52 - ...-NWKI-ff0b4348-41cb-40e4-8d13-f8d63fd01973.json | 57 -- ...-NWKI-ff65f97b-b115-4b5e-982e-66757a1be5ef.json | 53 - ...-NWKI-ff7e7c54-4e86-462d-b849-1ca11d72beb9.json | 59 -- ...-NWKI-ff824497-26e7-4518-af8a-3db0dbd9caf7.json | 63 -- ...-NWKI-ff8b50e6-08e4-4741-a71a-e37ccd013707.json | 57 -- ...-XLSX-001d8891-b389-444b-83a7-c3432b81624c.json | 53 - ...-XLSX-00f20ed0-d6be-485d-be1f-0fd5cfea6f45.json | 53 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...-XLSX-0f27cd90-05cb-4d6c-8d38-e09acd7f2ebd.json | 53 - ...-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json | 75 -- ...-XLSX-0f8786fb-d044-4b31-941f-a408fbdc4c2e.json | 75 -- ...-XLSX-0fd4da11-35df-4405-b3b6-c3bf292c198e.json | 75 -- ...-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json | 53 - ...-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json | 53 - ...-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json | 72 -- ...-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json | 63 -- ...-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json | 696 -------------- ...-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json | 53 - ...-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json | 63 -- ...-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json | 72 -- ...-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json | 72 -- ...-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json | 53 - ...-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json | 53 - ...-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json | 75 -- ...-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json | 75 -- ...-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json | 75 -- ...-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json | 75 -- ...-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json | 75 -- ...-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json | 75 -- ...-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json | 53 - ...-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json | 75 -- ...-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json | 53 - ...-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json | 63 -- ...-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json | 53 - ...-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json | 53 - ...-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json | 53 - ...-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json | 75 -- ...-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json | 75 -- ...-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json | 75 -- ...-XLSX-1fe9d3e6-1258-4234-a08f-9c62158b945e.json | 56 -- ...-XLSX-20399224-20cf-4682-b63b-1039bc81695b.json | 75 -- ...-XLSX-22248ab3-3273-493e-ad41-52e09a44fdea.json | 75 -- ...-XLSX-23143cb6-d5bf-43d6-999e-9e7fb8940fe7.json | 56 -- ...-XLSX-23aaaee0-4bb6-4447-b9f8-6423d81d4460.json | 72 -- ...-XLSX-23c00b7e-0c1e-4ed9-9073-70930288b37f.json | 56 -- ...-XLSX-249e9ccd-a8c0-4af6-8c89-140de02e31c5.json | 75 -- ...-XLSX-2567f730-1b78-4437-9b91-6fe79998ec50.json | 53 - ...-XLSX-259e7246-9990-49d6-af3c-5940e833c059.json | 75 -- ...-XLSX-25ab373b-b8e3-42aa-aea9-ff903abae4de.json | 75 -- ...-XLSX-2638bbbd-2ae0-46b0-a660-12ac80d6da80.json | 75 -- ...-XLSX-2641b5f1-c384-4451-ac4e-1cd0862b73b5.json | 53 - ...-XLSX-267757f5-aae8-4d00-ac70-960a493cdd12.json | 53 - ...-XLSX-28381dd3-7257-4b83-a27f-d84dfc23c94c.json | 75 -- ...-XLSX-28687db2-d96f-4ae7-a9e5-347348512eed.json | 53 - ...-XLSX-2896e48d-b164-444c-a1f3-10efee60ff1b.json | 75 -- ...-XLSX-28eafb1b-d6b3-433a-90b0-de8915c708e0.json | 63 -- ...-XLSX-29796c5e-00be-414f-8304-b40efd9d8d5a.json | 1016 -------------------- ...-XLSX-29a4590d-58e8-4505-af16-6b3317e95381.json | 53 - ...-XLSX-2a76a600-51e5-4b9c-854f-b7a24ae94fbf.json | 75 -- ...-XLSX-2b2f6867-cc9c-440b-97c2-df75bed08c76.json | 72 -- ...-XLSX-2d3e17da-204b-4822-8543-e890ac70619a.json | 72 -- ...-XLSX-2d5487cc-4302-4093-9841-3e24ebdfa7de.json | 72 -- ...-XLSX-2d64503d-3639-4667-b900-3ac40cd0ea06.json | 56 -- ...-XLSX-2d7d8d78-73a9-43f1-9ff2-a04758ba0533.json | 63 -- ...-XLSX-2db19dc9-6f15-43fc-800a-769041dc2654.json | 75 -- ...-XLSX-2e324464-52d5-47cc-8cf2-2d70d40e6266.json | 75 -- ...-XLSX-2e9edef4-d8c4-47c3-ae83-ae079149642c.json | 53 - ...-XLSX-2ea7e225-0ab5-4525-a5a0-dbf697effaef.json | 75 -- ...-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json | 696 -------------- ...-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json | 53 - ...-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json | 75 -- ...-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json | 72 -- ...-XLSX-31da7451-4360-45c4-ae93-daa94821da85.json | 75 -- ...-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json | 75 -- ...-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json | 75 -- ...-XLSX-35de3d4f-c3d6-4659-922f-b2c5f4b12237.json | 53 - ...-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json | 72 -- ...-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json | 56 -- ...-XLSX-39c0229d-4603-46be-a045-295259f1be57.json | 75 -- ...-XLSX-39fae5c8-0a37-4a1e-b0e1-27fbbc64a752.json | 75 -- ...-XLSX-3afe4ec2-f95d-45b5-bec2-7688ab47e4cf.json | 72 -- ...-XLSX-3b66b438-3970-46dd-b0e2-a8c3fe971e27.json | 53 - ...-XLSX-3ec4604b-9615-4c7c-920d-ed501d0d3095.json | 53 - ...-XLSX-3f01349b-231d-4fc6-a823-e71837ac0d0c.json | 56 -- ...-XLSX-3f4d5bc2-7087-4749-9cd2-9d33e1d21774.json | 53 - ...-XLSX-404264d0-872c-4786-9a7e-d33621c1ede5.json | 75 -- ...-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json | 75 -- ...-XLSX-40fba3c0-4cba-47d5-a250-c23a2297fa4c.json | 72 -- ...-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json | 75 -- ...-XLSX-41d9609b-1d68-442f-9896-03cc648e1240.json | 53 - ...-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json | 53 - ...-XLSX-446676a2-9dc2-47f8-b1a6-f71f18e62e73.json | 53 - ...-XLSX-4585d2c4-35ba-46e6-8923-87b8e0701cb3.json | 53 - ...-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json | 53 - ...-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json | 53 - ...-XLSX-47c449e6-57f0-416d-8b3b-bdf758f07c90.json | 75 -- ...-XLSX-4983675e-d2fd-4212-bc78-f424507604c4.json | 56 -- ...-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json | 72 -- ...-XLSX-4b3b96a6-c670-4ed6-90b8-2afe609f597f.json | 72 -- ...-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json | 75 -- ...-XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5.json | 53 - ...-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json | 72 -- ...-XLSX-4cead62b-dda7-4f5f-945f-ceb75c9a2eda.json | 53 - ...-XLSX-4dd12e6c-c554-44e6-8428-732407473c6b.json | 53 - ...-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json | 53 - ...-XLSX-4e10f71e-e821-4cb6-9cb1-ffa7d05a9294.json | 75 -- ...-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json | 75 -- ...-XLSX-502d510d-75f3-4178-ad7b-66d35eca34fc.json | 696 -------------- ...-XLSX-503e5833-d2b4-49c6-9f7e-beb12dffa851.json | 75 -- ...-XLSX-505f7983-f6cc-4965-b267-6bf2ebf5d4ac.json | 75 -- ...-XLSX-52342ee4-a212-41f4-919b-4b2657948373.json | 75 -- ...-XLSX-53055f0e-f399-401f-8e00-752d041dc2ad.json | 72 -- ...-XLSX-53347e92-6eda-4e2b-be15-4210fb3bec01.json | 696 -------------- ...-XLSX-53a8f685-15f3-401d-bfd8-04ba11b01caf.json | 75 -- ...-XLSX-54374c80-9b0b-422b-b7d6-1b88ff2559d7.json | 72 -- ...-XLSX-565b07e5-e902-4963-874c-29d6481bc951.json | 53 - ...-XLSX-5660a7b2-635d-448e-9ed0-9a27c74b8a35.json | 75 -- ...-XLSX-57070dcb-b8f4-417c-bd32-821515cb654b.json | 72 -- ...-XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5.json | 53 - ...-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json | 53 - ...-XLSX-59f17980-2a41-4525-a518-68576d2ebba8.json | 53 - ...-XLSX-5ce7f13f-0535-4b46-bf94-28c7566e42e6.json | 1016 -------------------- ...-XLSX-5e5f1183-8673-45fc-b1f8-b3eef5c3ae41.json | 75 -- 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Model::LazarClassification klass = RegressionCrossValidation if model.is_a? Model::LazarRegression bad_request_error "Unknown model class #{model.class}." unless klass diff --git a/lib/model.rb b/lib/model.rb index 9be0fa0..9ed3210 100644 --- a/lib/model.rb +++ b/lib/model.rb @@ -102,6 +102,7 @@ module OpenTox parameters.each do |p,v| model.algorithms[type] ||= {} model.algorithms[type][p] = v + model.algorithms[:descriptors].delete :categories if type == :descriptors and p == :type end else model.algorithms[type] = parameters @@ -246,7 +247,7 @@ module OpenTox elsif neighbor_similarities.size == 1 prediction.merge!({:value => dependent_variables.first, :probabilities => nil, :warning => "Only one similar compound in the training set. Predicting its experimental value.", :neighbors => [{:id => neighbor_ids.first, :similarity => neighbor_similarities.first}]}) else - query_descriptors.collect!{|d| d ? 1 : 0} if independent_variables[0][0].numeric? + query_descriptors.collect!{|d| d ? 1 : 0} if algorithms[:feature_selection] and algorithms[:descriptors][:method] == "fingerprint" # call prediction algorithm result = Algorithm.run algorithms[:prediction][:method], dependent_variables:neighbor_dependent_variables,independent_variables:neighbor_independent_variables ,weights:neighbor_similarities, query_variables:query_descriptors prediction.merge! result @@ -329,7 +330,7 @@ module OpenTox class LazarRegression < Lazar end - class Prediction + class Validation include OpenTox include Mongoid::Document @@ -377,20 +378,16 @@ module OpenTox def self.from_csv_file file metadata_file = file.sub(/csv$/,"json") bad_request_error "No metadata file #{metadata_file}" unless File.exist? metadata_file - prediction_model = self.new JSON.parse(File.read(metadata_file)) + model_validation = self.new JSON.parse(File.read(metadata_file)) training_dataset = Dataset.from_csv_file file model = Lazar.create training_dataset: training_dataset - prediction_model[:model_id] = model.id - prediction_model[:repeated_crossvalidation_id] = Validation::RepeatedCrossValidation.create(model).id - prediction_model.save - prediction_model + model_validation[:model_id] = model.id + model_validation[:repeated_crossvalidation_id] = Validation::RepeatedCrossValidation.create(model).id + model_validation.save + model_validation end - end - - class NanoPrediction < Prediction - - def self.create training_dataset: nil, prediction_feature:nil, algorithms: nil + def self.from_enanomapper training_dataset: nil, prediction_feature:nil, algorithms: nil # find/import training_dataset training_dataset ||= Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first @@ -401,18 +398,18 @@ module OpenTox end prediction_feature ||= Feature.where(name: "log2(Net cell association)", category: "TOX").first - prediction_model = self.new( + model_validation = self.new( :endpoint => prediction_feature.name, :source => prediction_feature.source, :species => "A549 human lung epithelial carcinoma cells", :unit => prediction_feature.unit ) model = Model::LazarRegression.create(prediction_feature: prediction_feature, training_dataset: training_dataset, algorithms: algorithms) - prediction_model[:model_id] = model.id + model_validation[:model_id] = model.id repeated_cv = Validation::RepeatedCrossValidation.create model - prediction_model[:repeated_crossvalidation_id] = repeated_cv.id - prediction_model.save - prediction_model + model_validation[:repeated_crossvalidation_id] = repeated_cv.id + model_validation.save + model_validation end end diff --git a/test/data/enm/bundles.json b/test/data/enm/bundles.json deleted file mode 100644 index 54958d5..0000000 --- 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json b/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json deleted file mode 100644 index 82a12a0..0000000 --- a/test/data/enm/study-FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-04172a41-9fea-36d9-8b5c-cf0bd3577d21", - "owner": { - "substance": { - "uuid": "FCSV-b228fc7b-c407-368a-bc1c-359c7375bb9b" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json b/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json deleted file mode 100644 index 6f4c890..0000000 --- a/test/data/enm/study-FCSV-22b70a1b-f42c-3516-9104-c6514dea801d.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-22b70a1b-f42c-3516-9104-c6514dea801d", - "owner": { - "substance": { - "uuid": "FCSV-43f0ea59-aa2f-31d8-8d87-19c95ec9be18" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json b/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json deleted file mode 100644 index a4d2bd9..0000000 --- a/test/data/enm/study-FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-22bbb494-8e7c-3e71-8521-fa4835374e6e", - "owner": { - "substance": { - "uuid": "FCSV-a153cba3-a82d-3e3c-bcbd-335cc5155f44" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json b/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json deleted file mode 100644 index a7b32cc..0000000 --- a/test/data/enm/study-FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "FCSV-2e652225-6953-30bf-bfc0-fd1562f1e5c5", - "owner": { - "substance": { - "uuid": "FCSV-8f5cd32a-3350-300b-91d0-87000ee5d7ee" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "UNKNOWN_TOXICITY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "7.99 Toxicity (other)" - }, - "endpoint": "Bicinchoninic Acid (BCA) Assay", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "Type of method": "Serum.density", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Total protein (BCA assay)", - "conditions": { - "MEDIUM": "Human serum (Sigma #H4522)" - }, - "result": { - "unit": "ug", - "loQualifier": "mean", - "loValue": 4.602, - "errQualifier": "sd", - "errorValue": 0.665 - } - } - ] -} diff --git a/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json b/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json deleted file mode 100644 index 5303336..0000000 --- a/test/data/enm/study-FCSV-2eb4073a-afc7-37ac-a361-ea02e938471e.json +++ 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json b/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json deleted file mode 100644 index aa981fb..0000000 --- a/test/data/enm/study-FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-55ea6ddb-4efd-346f-989b-2693ff260aa1", - "owner": { - "substance": { - "uuid": "FCSV-0d5c0fc7-de56-3507-b651-1c91bf030465" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json b/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json deleted file mode 100644 index 8fe25e5..0000000 --- a/test/data/enm/study-FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-58fd76c5-684c-3616-ad55-46c16b0ff8ef", - "owner": { - "substance": { - "uuid": "FCSV-8e1a76df-a12d-3254-ae6b-28e20153ef59" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json b/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json deleted file mode 100644 index 9f60c8d..0000000 --- a/test/data/enm/study-FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-5b621862-27ce-3b95-9874-ea5ad88850b1", - "owner": { - "substance": { - "uuid": "FCSV-a3c8dce5-07ab-3ca6-91a0-84072fc24aed" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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b/test/data/enm/study-FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538.json deleted file mode 100644 index 552015e..0000000 --- a/test/data/enm/study-FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-65524675-90cd-39f3-87e1-92f3cb8fe538", - "owner": { - "substance": { - "uuid": "FCSV-63da0f0e-51b8-3c56-b5d3-d4e0e9fb06a6" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - 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a/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json b/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json deleted file mode 100644 index 18eb9f9..0000000 --- a/test/data/enm/study-FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-7af90c89-bbfc-3449-877c-ebddb21613d9", - "owner": { - "substance": { - "uuid": "FCSV-9505d90b-f90b-3c94-a6cc-e4ee4c8ec46f" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json b/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json deleted file mode 100644 index a066c84..0000000 --- a/test/data/enm/study-FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-8dc1341b-fc11-38d1-8c3e-1443f333d06f", - "owner": { - "substance": { - "uuid": "FCSV-98074b22-064e-3cd7-a732-f5fa3005fa73" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json b/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json deleted file mode 100644 index 61eb5a1..0000000 --- a/test/data/enm/study-FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "FCSV-8df90dbe-eb93-3d89-bc5b-ef8acf283bf4", - "owner": { - "substance": { - "uuid": "FCSV-bdd4c371-ffec-34f1-ae5b-2c60d243e867" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "CRYSTALLITE_AND_GRAIN_SIZE_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.26 Nanomaterial crystallite and grain size" - }, - "endpoint": "DLS", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "ZetaSizer Nano ZS (Malvern Instruments)", - "Type of method": "DLS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Polydispersity index", - "conditions": { - "MEDIUM": " " - }, - "result": { - "unit": "nm", - "loQualifier": "mean", - "loValue": 0.135, - "errQualifier": "sd", - "errorValue": 0.06 - } - }, - { - "endpoint": "Polydispersity index", - "conditions": { - "MEDIUM": "Human serum (Sigma #H4522)" - }, - "result": { - "unit": "nm", - "loQualifier": "mean", - "loValue": 0.078, - "errQualifier": "sd", - "errorValue": 0.019 - } - } 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json b/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json deleted file mode 100644 index daf8a58..0000000 --- a/test/data/enm/study-FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-9ebc84cd-b14b-30e0-9899-5b178440479e", - "owner": { - "substance": { - "uuid": "FCSV-ffe19c9e-b1a1-3f38-a149-0d587fc5b172" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json b/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json deleted file mode 100644 index c734011..0000000 --- a/test/data/enm/study-FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-bb7493a6-a0f7-3ab2-9ccc-ed9766a4767e", - "owner": { - "substance": { - "uuid": "FCSV-8619e6db-2c01-389e-b05b-e75273d18359" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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b/test/data/enm/study-FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f.json deleted file mode 100644 index a371ca5..0000000 --- a/test/data/enm/study-FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-e81d3b28-8a8e-372b-9b53-9196ea67df2f", - "owner": { - "substance": { - "uuid": "FCSV-c2bce3a6-e09a-3fdc-a1f5-2281b22bb892" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - 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- } - } - ] -} diff --git a/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json b/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json deleted file mode 100644 index ff49732..0000000 --- a/test/data/enm/study-FCSV-e832825b-13bd-3480-a703-20f468c2a4c4.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-e832825b-13bd-3480-a703-20f468c2a4c4", - "owner": { - "substance": { - "uuid": "FCSV-7c56798c-f7cd-37d3-8a67-ead57f36db31" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - "guideline": [ - "doi: 10.1021/nn406018q" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": "Orbitrap-Velos mass spectrometer (Thermo)", - "Type of method": "LC MS/MS", - "testmat_form": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Spectral counts", - "conditions": { - }, - "result": { - "unit": null, - "textValue": 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b/test/data/enm/study-FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64.json deleted file mode 100644 index 11941f1..0000000 --- a/test/data/enm/study-FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "FCSV-f1cb23f6-9776-31fe-9053-6c697ebdba64", - "owner": { - "substance": { - "uuid": "FCSV-2de5071e-596b-3507-84fc-f9ba470cbcbf" - }, - "company": { - "uuid": "FCSV-319611c6-e7da-3977-a5ac-eb74d49a4319", - "name": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv" - } - }, - "citation": { - "title": "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles.csv", - "year": "2014", - "owner": null - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "PROTEOMICS_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "8.100 Proteomics" - }, - "endpoint": "Solution-based digestion protocol for serum protein isolates", - 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0.75 - } - }, - { - "endpoint": "Intensity Mean Hydrodynamic Diameter", - "conditions": { - "MEDIUM": "Human serum (Sigma #H4522)", - "PHRASEOTHER_PERCENTILE": null, - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 70.97, - "errQualifier": "sd", - "errorValue": 7.26 - } - } - ] -} diff --git a/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json b/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json deleted file mode 100644 index 9285fed..0000000 --- a/test/data/enm/study-IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d.json +++ /dev/null @@ -1,68 +0,0 @@ -{ - "uuid": "IUC5-49179f2f-867c-4e7c-8fd1-d09eb23c4c3d", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": null, - "year": "2006", - "owner": "" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "TO_ACUTE_ORAL_SECTION", - "term": "http://purl.enanomapper.org/onto/ENM_0000020", - "title": "7.2.1 Acute toxicity - oral" - }, - "endpoint": "Acute toxicity: oral.001", - "guideline": [ - "OECD Guideline 423 (Acute Oral toxicity - Acute Toxic Class Method)" - ] - }, - "parameters": { - "Sex": "female", - "Species": "rat" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "1 (reliable without restriction)" - }, - "interpretation": { - "result": "practically nontoxic" - }, - "effects": [ - { - "endpoint": "LDLo", - "conditions": { - "Sex": "female" - }, - "result": { - "unit": "mg/kg bw", - "loQualifier": ">=", - "loValue": 2000 - } - }, - { - "endpoint": "LD50 cut-off ", - "conditions": { - "Sex": "female" - }, - "result": { - "unit": "mg/kg bw", - "loQualifier": ">=", - "loValue": 5000 - } - } - ] -} diff --git a/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json b/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json deleted file mode 100644 index edea576..0000000 --- a/test/data/enm/study-IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded.json +++ /dev/null @@ -1,115 +0,0 @@ -{ - "uuid": "IUC5-4bca14fc-3e43-435e-a06e-d924fc77bded", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": null, - "year": "2011", - "owner": "" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle size distribution (Granulometry).001", - "guideline": [ - "Transmission Electron Microscopy (TEM)" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": "imaging technique", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "2 (reliable with restrictions)" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN DIAMETER", - "conditions": { - "PHRASEOTHER_PERCENTILE": null, - "Remark": { - "loValue": null - }, - "SEQ_NUM": { - "loValue": null - }, - "STD_DEV": { - "loValue": null - } - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 3, - "upQualifier": "<", - "upValue": 20 - } - }, - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "PHRASEOTHER_PERCENTILE": null, - "Remark": { - "loValue": null - }, - "SEQ_NUM": { - "loValue": null - }, - "STD_DEV": { - "Class": "GEOMETRIC STANDARD DEVIATION", - "isResult": "true", - "loQualifier": null, - "loValue": null, - "upQualifier": null - } - }, - "result": { - "unit": null - } - }, - { - "endpoint": "PARTICLE SIZE.D90", - "conditions": { - "PHRASEOTHER_PERCENTILE": { - "loQualifier": " ", - "loValue": "D90" - }, - "Remark": { - "loValue": null - }, - "SEQ_NUM": { - "loValue": null - }, - "STD_DEV": { - "loValue": null - } - }, - "result": { - "unit": "nm", - "loQualifier": "", - "loValue": 12.7, - "upQualifier": "", - "textValue": "" - } - } - ] -} diff --git a/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json b/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json deleted file mode 100644 index 0f97d05..0000000 --- a/test/data/enm/study-IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "IUC5-4d6e67a8-4301-4e6a-bafc-20e20fbaf2ad", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": null, - "year": "2006", - "owner": "" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific surface area.001", - "guideline": [ - "DIN66131" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": "BET" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "2 (reliable with restrictions)" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null, - "STD_DEV": { - } - }, - "result": { - "unit": "m²/g", - "loQualifier": "", - "loValue": 253, - "upQualifier": "" - } - } - ] -} diff --git a/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json b/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json deleted file mode 100644 index c2d07ab..0000000 --- a/test/data/enm/study-IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9.json +++ /dev/null @@ -1,71 +0,0 @@ -{ - "uuid": "IUC5-6bdaad41-66c2-4d24-99ee-8d579243ddd9", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": "Thurnherr, T. et al.", - "year": "2011", - "owner": "" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "TO_GENETIC_IN_VITRO_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "7.6.1 Genetic toxicity in vitro" - }, - "endpoint": "Exp Supporting Genetic toxicity in vitro.008", - "guideline": [ - null - ] - }, - "parameters": { - "Metabolic activation system": null, - "Species": "human pulmonary epithelial cell line A549", - "Target gene": null, - "Type of genotoxicity": "chromosome and DNA damage", - "Type of study": "Micronucleus test in vitro (MNvit) and Comet assay in vitro" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "supporting study", - "r_studyResultType": "experimental result", - "r_value": "other:" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "GENOTOXICITY", - "conditions": { - "Metabolic activation": "without", - "Species": "A549" - }, - "result": { - "unit": null, - "textValue": "negative" - } - }, - { - "endpoint": "GENOTOXICITY", - "conditions": { - "Metabolic activation": "without", - "Species": "A549" - }, - "result": { - "unit": null, - "textValue": "negative" - } - } - ] -} diff --git a/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json b/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json deleted file mode 100644 index ecaa096..0000000 --- a/test/data/enm/study-IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14.json +++ /dev/null @@ -1,129 +0,0 @@ -{ - "uuid": "IUC5-708684e4-4e3b-49cd-92ec-9fc2f3a4dc14", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": null, - "year": "2010", - "owner": "" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta potential.001", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "2 (reliable with restrictions)" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "STD_DEV": { - "loValue": 2.9, - "unit": "" - }, - "pH": { - "loValue": "1.9" - } - }, - "result": { - "unit": "mV", - "loQualifier": "", - "loValue": 41.4, - "upQualifier": "" - } - }, - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "STD_DEV": { - "loValue": 1.5, - "unit": "" - }, - "pH": { - "loValue": "2.99" - } - }, - "result": { - "unit": "mV", - "loQualifier": "", - "loValue": 39.3, - "upQualifier": "" - } - }, - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "STD_DEV": { - "loValue": 6.5, - "unit": "" - }, - "pH": { - "loValue": "4.26" - } - }, - "result": { - "unit": "mV", - "loQualifier": "", - "loValue": 21.4, - "upQualifier": "" - } - }, - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "STD_DEV": { - "loValue": 1.7, - "unit": "" - }, - "pH": { - "loValue": "5.04" - } - }, - "result": { - "unit": "mV", - "loQualifier": "", - "loValue": 34.5, - "upQualifier": "" - } - } - ] -} diff --git a/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json b/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json deleted file mode 100644 index ec4e227..0000000 --- a/test/data/enm/study-IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "IUC5-74e91cde-2ffa-43ec-8fcd-5d6407f1602c", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": null, - "year": "2008", - "owner": "" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "DUSTINESS_SECTION", - "term": "http://purl.enanomapper.org/onto/ENM_9000003", - "title": "4.31 Nanomaterial dustiness" - }, - "endpoint": "Dustiness.001", - "guideline": [ - "DIN 33897-2 (2002) Workplace atmospheres - Determination of the dustiness of bulk materials - Part 2:Continuous Drop (note: SUPERSEDED by EN 1505:2006)" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": "continuous drop" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DUSTINESS INDEX", - "conditions": { - "STD_DEV": { - } - }, - "result": { - "unit": null - } - } - ] -} diff --git a/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json b/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json deleted file mode 100644 index 1cab021..0000000 --- a/test/data/enm/study-IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "IUC5-9db5f020-e0fa-47c8-8e61-3eeb8038e279", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": "Ragot J, Voetz M ", - "year": "2010", - "owner": "" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "GI_GENERAL_INFORM_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.1 Appearance" - }, - "endpoint": "Appearance/physical state/colour.001", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "2 (reliable with restrictions)" - }, - "interpretation": { - "result": "inorganic" - }, - "effects": [ - { - "endpoint": "solid", - "conditions": { - "Remark": "nanomaterial" - }, - "result": { - "unit": null - } - } - ] -} diff --git a/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json b/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json deleted file mode 100644 index b393b4d..0000000 --- a/test/data/enm/study-IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4.json +++ /dev/null @@ -1,54 +0,0 @@ -{ - "uuid": "IUC5-f6eb018b-2dc5-462b-be29-a6ffce0fd4d4", - "owner": { - "substance": { - "uuid": "IUC5-5f313d1f-4129-499c-abbe-ac18642e2471" - }, - "company": { - "uuid": "IUC5-354430c7-746e-450e-9722-09788eb90a29", - "name": "Ideaconsult Ltd. / Sofia / Bulgaria" - } - }, - "citation": { - "title": "Muller, J. et al.", - "year": "2009", - "owner": "" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "TO_CARCINOGENICITY_SECTION", - "term": "http://purl.enanomapper.org/onto/ENM_0000029", - "title": "7.7 Carcinogenicity" - }, - "endpoint": "Carcinogenicity.001", - "guideline": [ - null - ] - }, - "parameters": { - "Doses/concentrations": "MWCNT+: 2 or 20 mg/animal;MWCNT-: 20 mg/animal;Crocidolite: 2 mg/animal", - "Route of administration": "intraperitoneal", - "Species": "rat" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": "key study", - "r_studyResultType": "experimental result", - "r_value": "2 (reliable with restrictions)" - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "", - "conditions": { - }, - "result": { - } - } - ] -} diff --git a/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json b/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json deleted file mode 100644 index 467bacf..0000000 --- a/test/data/enm/study-NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-001eeffd-a257-4e01-9f59-cd7e4585bc43", - "owner": { - "substance": { - "uuid": "NWKI-90869553-c8fe-3ef6-8e68-47f392958127" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 3.09 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json b/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json deleted file mode 100644 index 73d3608..0000000 --- a/test/data/enm/study-NWKI-0068416d-360e-4569-8529-b81e33d7879f.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-0068416d-360e-4569-8529-b81e33d7879f", - "owner": { - "substance": { - "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 38 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json b/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json deleted file mode 100644 index d6a0866..0000000 --- a/test/data/enm/study-NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-01254983-14c9-4ff4-a6ab-8a88470c4dc7", - "owner": { - "substance": { - "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method 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a/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json b/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json deleted file mode 100644 index 43dece6..0000000 --- a/test/data/enm/study-NWKI-01486dcf-1529-4177-87cc-3ac2968d7604.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-01486dcf-1529-4177-87cc-3ac2968d7604", - "owner": { - "substance": { - "uuid": "NWKI-74c6a1ca-f415-3c86-9437-446299eb5e40" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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null, - "loValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json b/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json deleted file mode 100644 index e80fe03..0000000 --- a/test/data/enm/study-NWKI-02e70892-6694-4917-abc4-04073abdfae8.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-02e70892-6694-4917-abc4-04073abdfae8", - "owner": { - "substance": { - "uuid": "NWKI-a855e2c5-73f1-32c0-8a87-aa521fd69928" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1063/1.2061873", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - 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a/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json b/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json deleted file mode 100644 index d068944..0000000 --- a/test/data/enm/study-NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-037a45cf-b93d-4621-a584-a77e5b4ed359", - "owner": { - "substance": { - "uuid": "NWKI-674cfd7c-bc77-36c7-bbe0-d52dd0233d64" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1080/10934520600966177", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loQualifier": ">=", - "loValue": 50, - "upQualifier": "<=", - "upValue": 245 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json b/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json deleted file mode 100644 index 559aff2..0000000 --- a/test/data/enm/study-NWKI-03c2146b-f531-4e6e-9092-c1faf2894574.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-03c2146b-f531-4e6e-9092-c1faf2894574", - "owner": { - "substance": { - "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555" - }, - "company": { - 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-1,58 +0,0 @@ -{ - "uuid": "NWKI-040afb18-8fc4-4be2-8d1a-35f506470c0a", - "owner": { - "substance": { - "uuid": "NWKI-19b5dfef-0d95-3878-9075-2897e8631277" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3390/ijerph110908867", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20, - "errorValue": 4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json b/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json deleted file mode 100644 index 15de0b5..0000000 --- a/test/data/enm/study-NWKI-04792111-4a88-4b55-8c06-630900a232b4.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-04792111-4a88-4b55-8c06-630900a232b4", - "owner": { - "substance": { - "uuid": "NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1039/C4FD00117F", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 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"loQualifier": ">=", - "loValue": 20, - "upQualifier": "<=", - "upValue": 80 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json b/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json deleted file mode 100644 index d9575ce..0000000 --- a/test/data/enm/study-NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-04db465c-6485-4cf7-ba99-79ebf0b8ed0b", - "owner": { - "substance": { - "uuid": "NWKI-823e6217-d5b0-3c61-b886-768cfe726d38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, 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"loValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json b/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json deleted file mode 100644 index a669521..0000000 --- a/test/data/enm/study-NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-0534ae85-3e71-44df-bb0f-3250d66e566a", - "owner": { - "substance": { - "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, 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+0,0 @@ -{ - "uuid": "NWKI-05fe5e71-840f-4547-b1e5-0da0b4a50043", - "owner": { - "substance": { - "uuid": "NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_BOILING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000257", - "title": "4.3 Boiling point" - }, - "endpoint": "Boiling Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Boiling point", - "conditions": { - "Atm. Pressure": null, - "Decomposition": null - }, - "result": { - "unit": "Celsius", - "loValue": 2230 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json b/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json deleted file mode 100644 index 522cdbf..0000000 --- a/test/data/enm/study-NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-0603f68c-d040-45ee-a86f-e286e0b42fba", - "owner": { - "substance": { - "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - 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"uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 25, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json b/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json deleted file mode 100644 index c6ecf72..0000000 --- a/test/data/enm/study-NWKI-07bdb9ac-d6b8-49ed-9e70-c0a4e689b500.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 7 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json b/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json deleted file mode 100644 index 1a9ec74..0000000 --- a/test/data/enm/study-NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-07be4b7f-0887-463d-b691-f394d8ea38e9", - "owner": { - "substance": { - "uuid": "NWKI-d42892b8-9b57-30a2-aa89-af61880c337a" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json b/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json deleted file mode 100644 index a3a4f3f..0000000 --- a/test/data/enm/study-NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "NWKI-08af89f3-bfa5-4d48-b6f4-223f642ad984", - "owner": { - "substance": { - "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - 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"loValue": 40.1, - "errorValue": 12.6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json b/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json deleted file mode 100644 index eacd969..0000000 --- a/test/data/enm/study-NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-08e4b07b-144b-4d9c-9bf6-9d8228dd1846", - "owner": { - "substance": { - "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - 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}, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.49 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json b/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json deleted file mode 100644 index 327d069..0000000 --- a/test/data/enm/study-NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-0b3cce4b-154f-44ce-ae76-d549863886c4", - "owner": { - "substance": { - "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - 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"uuid": "NWKI-11ce2c1b-a219-4fc7-841d-add4602b708b", - "owner": { - "substance": { - "uuid": "NWKI-3c8c8bb2-416f-3bff-862a-8433538cd4c5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - 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"loValue": 2.29 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json b/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json deleted file mode 100644 index 74270ed..0000000 --- a/test/data/enm/study-NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-133b31f5-75fb-4baa-9d21-20bbe6524d9d", - "owner": { - "substance": { - "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - 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"loValue": 28 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json b/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json deleted file mode 100644 index 3b89e72..0000000 --- a/test/data/enm/study-NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-16a4b79d-ba53-4885-a2b8-f4204bf105d5", - "owner": { - "substance": { - "uuid": "NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Diameter", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - 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"uuid": "NWKI-173dce50-8e10-4eb6-8606-86a64f77aa63", - "owner": { - "substance": { - "uuid": "NWKI-86b21444-5403-3e29-b117-e09ef92cca2a" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Isoelectric Point", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ISOELECTRIC POINT", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 5.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json b/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json deleted file mode 100644 index 4efa66f..0000000 --- a/test/data/enm/study-NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-17738fdb-85b1-4bee-91c6-ce6784ade433", - "owner": { - "substance": { - "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 10, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 101 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json b/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json deleted file mode 100644 index be5ca0c..0000000 --- a/test/data/enm/study-NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-17b02ae9-1dd2-4a6a-8162-4ed9e0e25770", - "owner": { - "substance": { - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json b/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json deleted file mode 100644 index 4685cf8..0000000 --- a/test/data/enm/study-NWKI-180c42f0-dd92-422b-a704-2cede4ecd197.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "NWKI-180c42f0-dd92-422b-a704-2cede4ecd197", - "owner": { - "substance": { - "uuid": "NWKI-3424add5-867e-3dc5-864d-36c47589024b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn301622h", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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"owner": { - "substance": { - "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 5, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json b/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json deleted file mode 100644 index c6e6fee..0000000 --- a/test/data/enm/study-NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-1d0171f7-e65c-4da4-9b47-5218fb7f50ed", - "owner": { - "substance": { - "uuid": "NWKI-9142c528-4a84-3566-b678-dc1eef7d22fe" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "Shape", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Rutile" - }, - "effects": [ - { - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Rutile" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json b/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json deleted file mode 100644 index a12caab..0000000 --- a/test/data/enm/study-NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-1dbe71a3-fc3c-4dde-9e19-213824a4650e", - "owner": { - "substance": { - "uuid": "NWKI-34a6262c-7f25-3eea-9dd0-bf1e1df40ca9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "SiO2" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "SiO2" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "APS_Coating" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "APS" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "APS" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json b/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json deleted file mode 100644 index a52c507..0000000 --- a/test/data/enm/study-NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-1ddab2f0-52a5-4c0a-835c-8644a8da7e30", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 25, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json b/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json deleted file mode 100644 index afaa012..0000000 --- a/test/data/enm/study-NWKI-1df33a17-0117-4758-bb27-99b89f32effb.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - 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"result": { - "unit": "nm", - "loValue": 58 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json b/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json deleted file mode 100644 index b1a68df..0000000 --- a/test/data/enm/study-NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-1f25b708-f769-4dcf-8e2f-85bfac650cdd", - "owner": { - "substance": { - "uuid": "NWKI-ee237892-6184-3016-92af-b41dc14e9f9b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - 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"uuid": "NWKI-202033a2-bd5b-4059-9c82-d95501402b12", - "owner": { - "substance": { - "uuid": "NWKI-bbce341e-3e4d-37f9-a891-5462ada32180" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "mV", - "loValue": -50 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json b/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json deleted file mode 100644 index 38e81be..0000000 --- a/test/data/enm/study-NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-203bc896-c8b2-4425-ba37-6c4ab168f360", - "owner": { - "substance": { - "uuid": "NWKI-e85f1dfb-0830-32a3-8394-c2cce810e3e2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - 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"Remark": null, - "pH": { - "loValue": 7 - } - }, - "result": { - "unit": "mV", - "loValue": -22, - "errorValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json b/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json deleted file mode 100644 index e3aa144..0000000 --- a/test/data/enm/study-NWKI-20706a1c-e61e-45e8-89f4-5253276b5155.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-20706a1c-e61e-45e8-89f4-5253276b5155", - "owner": { - "substance": { - "uuid": "NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -16.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json b/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json deleted file mode 100644 index 3f9a84b..0000000 --- a/test/data/enm/study-NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-2099233e-b04b-4f9e-89f7-e25339b6cc90", - "owner": { - "substance": { - "uuid": "NWKI-82c12809-d7af-3061-a531-1db744c521f0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC" - }, - "DESCRIPTION": { - 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"term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 180 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json b/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json deleted file mode 100644 index 03bb410..0000000 --- a/test/data/enm/study-NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-2141b230-1f6c-4cef-a0c0-beeb5ace4344", - "owner": { - "substance": { - "uuid": "NWKI-13b28611-c05b-325b-9e60-182c49b2a288" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 3, - "unit": "h" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 22 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json b/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json deleted file mode 100644 index 93a87a2..0000000 --- a/test/data/enm/study-NWKI-2195cc6b-370b-478d-873c-de64afca349f.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-2195cc6b-370b-478d-873c-de64afca349f", - "owner": { - "substance": { - "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - 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} - ] -} diff --git a/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json b/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json deleted file mode 100644 index 169d21d..0000000 --- a/test/data/enm/study-NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-23e79594-2966-47eb-90a7-adebb71c5a1a", - "owner": { - "substance": { - "uuid": "NWKI-fc00f3ef-464d-32d3-9d12-7e78d25db6ce" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - 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"uuid": "NWKI-25d1bdc0-b1e2-4d96-bfdc-f26099585f76", - "owner": { - "substance": { - "uuid": "NWKI-88767671-5631-3c93-8cfc-db0f48978e77" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json b/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json deleted file mode 100644 index 41513f8..0000000 --- a/test/data/enm/study-NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-26592811-15c2-4a2e-b684-e0849e59ad2d", - "owner": { - "substance": { - "uuid": "NWKI-7b6aae8a-bc39-3794-8140-8d409630c8bc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -59.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json b/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json deleted file mode 100644 index a7947a4..0000000 --- a/test/data/enm/study-NWKI-26a723a1-8c78-49d7-a277-7008df754248.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-26a723a1-8c78-49d7-a277-7008df754248", - "owner": { - "substance": { - "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 250, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json b/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json deleted file mode 100644 index c842d0f..0000000 --- a/test/data/enm/study-NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-26b625c2-f38a-4a2f-b950-0e2c9f7191f7", - "owner": { - "substance": { - "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 6, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json b/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json deleted file mode 100644 index f383853..0000000 --- a/test/data/enm/study-NWKI-26e60e64-968f-4935-af8e-22052f7f09ba.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-26e60e64-968f-4935-af8e-22052f7f09ba", - "owner": { - "substance": { - "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 1, - "unit": "h" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 13 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json b/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json deleted file mode 100644 index 63c4995..0000000 --- a/test/data/enm/study-NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-26e89dc8-26c3-48a9-ad65-a91dec14ef56", - "owner": { - "substance": { - "uuid": "NWKI-3ccff23c-b3d6-3614-aef4-4324be42804b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 12.6, - "errorValue": 4.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json b/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json deleted file mode 100644 index 9f1fdab..0000000 --- a/test/data/enm/study-NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-2732ed2c-53c1-4fff-a4f0-b8772e472fcd", - "owner": { - "substance": { - "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 31 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json b/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json deleted file mode 100644 index bf9bc1a..0000000 --- a/test/data/enm/study-NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-28032d42-937c-499a-bbe2-f4a1da0e89c2", - "owner": { - "substance": { - "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 1, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json b/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json deleted file mode 100644 index 1223b70..0000000 --- a/test/data/enm/study-NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-283a4d9f-1ddf-4550-9478-f419b7ff078a", - "owner": { - "substance": { - "uuid": "NWKI-3a3b2bcd-8284-37dc-a619-56ffbd7ebd68" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn2021056", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 23.4, - "errorValue": 4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json b/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json deleted file mode 100644 index a625530..0000000 --- a/test/data/enm/study-NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-2857ed00-21b0-4191-9628-dc163ac5ad49", - "owner": { - "substance": { - "uuid": "NWKI-c2ab6def-8305-3b78-958a-4657b3363e11" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Isoelectric Point", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ISOELECTRIC POINT", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 5.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json b/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json deleted file mode 100644 index 905dfd4..0000000 --- a/test/data/enm/study-NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-2874555f-a89b-4a19-a9b0-c8f5012f0d8b", - "owner": { - "substance": { - "uuid": "NWKI-4f91db77-4cd0-3482-b989-571d2a9a4228" - 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"uuid": "NWKI-288222ad-ae6a-4ae7-ab7e-70ffd4433def", - "owner": { - "substance": { - "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"uuid": "NWKI-28d2fca5-1d49-4401-aa15-afbcddb14154", - "owner": { - "substance": { - "uuid": "NWKI-5a049bb7-380d-3c89-9c39-f1310ed7b09d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 92, - "errorValue": 2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json b/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json deleted file mode 100644 index b544a7a..0000000 --- a/test/data/enm/study-NWKI-28f4d696-5c08-414c-933a-4ab55dff076f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-28f4d696-5c08-414c-933a-4ab55dff076f", - "owner": { - "substance": { - "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - 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}, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 2000, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json b/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json deleted file mode 100644 index a3c44b3..0000000 --- a/test/data/enm/study-NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-29bb615b-97c3-48e8-b04c-9b3c0e6d3dc2", - "owner": { - "substance": { - "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - 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"Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -48.5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json b/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json deleted file mode 100644 index dcb89c0..0000000 --- a/test/data/enm/study-NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-2a93ff70-da43-42ff-8333-ae1552a0e9fa", - "owner": { - "substance": { - "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - 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}, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "COOH" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json b/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json deleted file mode 100644 index d82609a..0000000 --- a/test/data/enm/study-NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-2bacd054-36df-4ea5-810c-0de08179cbf3", - "owner": { - "substance": { - "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - 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"uuid": "NWKI-308b284b-e2ae-4f73-a350-d0deb35cb0b2", - "owner": { - "substance": { - "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 20, - "upQualifier": "<=", - "upValue": 60 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json b/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json deleted file mode 100644 index c73f6dc..0000000 --- a/test/data/enm/study-NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-30a5f8ec-7758-4f6e-bf77-fc75108fd1fb", - "owner": { - "substance": { - "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 31 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json b/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json deleted file mode 100644 index d85e372..0000000 --- a/test/data/enm/study-NWKI-30d9478c-941f-4174-bdf0-48841c418f1a.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-30d9478c-941f-4174-bdf0-48841c418f1a", - "owner": { - "substance": { - "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 1, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json b/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json deleted file mode 100644 index db1f49b..0000000 --- a/test/data/enm/study-NWKI-315aa68b-5450-4657-8545-0a894a6c662e.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-315aa68b-5450-4657-8545-0a894a6c662e", - "owner": { - "substance": { - "uuid": "NWKI-984a9c7f-2372-3b8f-9ff5-93a9f94f2eb7" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn202116p", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 855, - "errorValue": 37 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json b/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json deleted file mode 100644 index 8f1a964..0000000 --- a/test/data/enm/study-NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-316b62f2-31bc-4b10-a967-48c9be7cd6be", - "owner": { - "substance": { - "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 80, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json b/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json deleted file mode 100644 index d616a39..0000000 --- a/test/data/enm/study-NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-31812e13-570d-4bf0-8c6d-5635218c8fb5", - "owner": { - "substance": { - "uuid": "NWKI-9fb12a3a-3a26-3f95-82ed-371f58d92dfe" - 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"uuid": "NWKI-318a63ca-3312-41f8-8896-0f20a7cc8b10", - "owner": { - "substance": { - "uuid": "NWKI-cad5bf58-cc90-33e5-88bb-bad4c9f9fe9e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DCY5" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json b/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json deleted file mode 100644 index 373adeb..0000000 --- a/test/data/enm/study-NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-3225cb74-4a8d-4395-b54e-4e82b7314e3a", - "owner": { - "substance": { - "uuid": "NWKI-99fe068d-e343-35f8-9cc9-06c3a3cf8e22" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 51.5, - "errorValue": 7.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json b/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json deleted file mode 100644 index ee347fd..0000000 --- a/test/data/enm/study-NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-327518e0-53d1-4c5c-9c94-a80e3d43f535", - "owner": { - "substance": { - "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 3.51 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json b/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json deleted file mode 100644 index 6d21b72..0000000 --- a/test/data/enm/study-NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-32b90f7e-f71d-4748-8903-1afe74263c9b", - "owner": { - "substance": { - "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 150, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json b/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json deleted file mode 100644 index c769cee..0000000 --- a/test/data/enm/study-NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-32ed71dd-3d4e-4bbb-9ca1-dcf617d6a280", - "owner": { - "substance": { - "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - 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}, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 1.6, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json b/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json deleted file mode 100644 index 4861fc9..0000000 --- a/test/data/enm/study-NWKI-35624d25-940c-4ca1-8342-b3a41a43323f.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-35624d25-940c-4ca1-8342-b3a41a43323f", - "owner": { - "substance": { - "uuid": "NWKI-e24378b0-c0bb-365a-b533-e8f303681c2e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390.2011.587903", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 142 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json b/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json deleted file mode 100644 index 4f7b72f..0000000 --- a/test/data/enm/study-NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-35e268e0-2d8f-4904-8a92-34016c907cf4", - "owner": { - "substance": { - "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - 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"uuid": "NWKI-378cd8d0-d9a4-4700-8fda-0c27fb863dd4", - "owner": { - "substance": { - "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 1, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json b/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json deleted file mode 100644 index fbc8fe2..0000000 --- a/test/data/enm/study-NWKI-3811859b-4696-4635-8556-d86a07808072.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-3811859b-4696-4635-8556-d86a07808072", - "owner": { - "substance": { - "uuid": "NWKI-88767671-5631-3c93-8cfc-db0f48978e77" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.87 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json b/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json deleted file mode 100644 index 4345a50..0000000 --- a/test/data/enm/study-NWKI-381ff327-4da8-4176-8e57-fa95e52c570d.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-381ff327-4da8-4176-8e57-fa95e52c570d", - "owner": { - "substance": { - "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "Shape", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Rutile" - }, - "effects": [ - { - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Rutile" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json b/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json deleted file mode 100644 index d8c5bbd..0000000 --- a/test/data/enm/study-NWKI-3825451c-f85b-45a4-b830-199dcdb54aff.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "NWKI-3825451c-f85b-45a4-b830-199dcdb54aff", - "owner": { - "substance": { - "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -13.6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json b/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json deleted file mode 100644 index 28ff9bb..0000000 --- a/test/data/enm/study-NWKI-3941a35c-3571-4154-a31d-354556e86453.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 36 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json b/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json deleted file mode 100644 index 9a81fe1..0000000 --- a/test/data/enm/study-NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "NWKI-3f4dfa1e-e8c4-43db-b079-7769a06576ee", - "owner": { - "substance": { - "uuid": "NWKI-ede00e9f-201f-33c9-9191-8dbf67fcf1b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - 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"result": { - "unit": "nm", - "loValue": 10 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json b/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json deleted file mode 100644 index 1819c05..0000000 --- a/test/data/enm/study-NWKI-3fc5844e-758a-4723-9853-26c51789b4c5.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-3fc5844e-758a-4723-9853-26c51789b4c5", - "owner": { - "substance": { - "uuid": "NWKI-86b21444-5403-3e29-b117-e09ef92cca2a" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - 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"uuid": "NWKI-405149ad-184c-4263-996f-1df90ef019b9", - "owner": { - "substance": { - "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - 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}, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json b/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json deleted file mode 100644 index 19ebc74..0000000 --- a/test/data/enm/study-NWKI-4171cf30-7412-4059-80ce-8f79a45445b6.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-4171cf30-7412-4059-80ce-8f79a45445b6", - "owner": { - "substance": { - "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json b/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json deleted file mode 100644 index b1b9810..0000000 --- a/test/data/enm/study-NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-42360b08-f8be-49c6-98e6-bb8616f090b5", - "owner": { - "substance": { - "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 3.24 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json b/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json deleted file mode 100644 index ac92c1c..0000000 --- a/test/data/enm/study-NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-424e79ab-f8be-4bad-8c1e-2abf76cdcdd7", - "owner": { - "substance": { - "uuid": "NWKI-743f46ab-ca20-3f60-a14f-1695430eae68" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - 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"uuid": "NWKI-42951d23-9941-41f1-b599-8adfde19b8aa", - "owner": { - "substance": { - "uuid": "NWKI-4b4cb369-8202-3483-9220-553e433c9159" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DCY35" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json b/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json deleted file mode 100644 index 9ef0fa0..0000000 --- a/test/data/enm/study-NWKI-42eae623-28f5-4ee5-9698-2669c8328041.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-42eae623-28f5-4ee5-9698-2669c8328041", - "owner": { - "substance": { - "uuid": "NWKI-17c74ed1-b289-3ca1-8477-390a588cb28c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DPEG" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "PVA" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json b/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json deleted file mode 100644 index 92f4a62..0000000 --- a/test/data/enm/study-NWKI-42eeeb5b-e44c-4039-884d-367249af0038.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-42eeeb5b-e44c-4039-884d-367249af0038", - "owner": { - "substance": { - "uuid": "NWKI-ff480524-2eb0-39e2-a449-47c026f09eb9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 185, - "errorValue": 12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json b/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json deleted file mode 100644 index 48b572a..0000000 --- a/test/data/enm/study-NWKI-4453c171-34c1-400e-96e5-f213258eb9a0.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-4453c171-34c1-400e-96e5-f213258eb9a0", - "owner": { - "substance": { - "uuid": "NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json b/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json deleted file mode 100644 index 9ddff1e..0000000 --- a/test/data/enm/study-NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-44812f4a-7893-4211-b5d4-d1c61cd9e334", - "owner": { - "substance": { - "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "Shape", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Anatase" - }, - "effects": [ - { - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Anatase" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json b/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json deleted file mode 100644 index 7906c35..0000000 --- a/test/data/enm/study-NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-449dbb75-83c8-4f54-8208-3b0f7093ddc5", - "owner": { - "substance": { - "uuid": "NWKI-fe8fe744-ea1f-3841-9a6d-f81be44651a8" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Ag" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Ag" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "TMATCoating" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "TMAT" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "SCC[N+](C)(C)C.[I-]" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "TMAT" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json b/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json deleted file mode 100644 index 0cb17f5..0000000 --- a/test/data/enm/study-NWKI-45484e90-4453-4b65-a581-2b81994d5d96.json +++ /dev/null @@ -1,65 +0,0 @@ -{ - "uuid": "NWKI-45484e90-4453-4b65-a581-2b81994d5d96", - "owner": { - "substance": { - "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "Serum": { - "loValue": "sfMEM" - }, - "pH": { - "loValue": 8.12 - } - }, - "result": { - "unit": "mV", - "loValue": -30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json b/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json deleted file mode 100644 index 3ed2d9b..0000000 --- a/test/data/enm/study-NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-45a2a522-fd42-4b13-a51c-c2ae30d8e4e8", - "owner": { - "substance": { - "uuid": "NWKI-c05becdf-4b9b-3599-9922-89235b2e10da" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 25 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json b/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json deleted file mode 100644 index c3b0511..0000000 --- a/test/data/enm/study-NWKI-46021e41-3e84-406a-a9db-36bdaa480006.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-46021e41-3e84-406a-a9db-36bdaa480006", - "owner": { - "substance": { - "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -3.61 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json b/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json deleted file mode 100644 index 512480d..0000000 --- a/test/data/enm/study-NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-46590639-f0b8-45ae-ae2f-610b8a912cc4", - "owner": { - "substance": { - "uuid": "NWKI-2390517f-b763-3850-b1b4-6e50fee63829" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json b/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json deleted file mode 100644 index fc35c97..0000000 --- a/test/data/enm/study-NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-46a0c2a5-0e02-4eb7-93fb-e15a56feea9e", - "owner": { - "substance": { - "uuid": "NWKI-70e8dac6-42a3-36ed-8fa3-19ffbc3bb69f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "BET", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 50 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json b/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json deleted file mode 100644 index d27c3da..0000000 --- a/test/data/enm/study-NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-4715a11f-9c3a-4a02-b0f4-d5e05baf2e46", - "owner": { - "substance": { - "uuid": "NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 9.7, - "errorValue": 0.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json b/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json deleted file mode 100644 index 9c8c6bd..0000000 --- a/test/data/enm/study-NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-4716f798-2c74-459d-90ca-dddaf4d0ef9f", - "owner": { - "substance": { - "uuid": "NWKI-ad44f58f-8080-3017-9f8d-485fad044849" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"uuid": "NWKI-474fcad3-d31e-434a-92dc-2c1d94802498", - "owner": { - "substance": { - "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - 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"unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json b/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json deleted file mode 100644 index 47f2cca..0000000 --- a/test/data/enm/study-NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-4a9f81e2-c857-4ca4-820d-95d026a2b83b", - "owner": { - "substance": { - "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - 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}, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -7.57 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json b/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json deleted file mode 100644 index 808cf9c..0000000 --- a/test/data/enm/study-NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-4acc3309-36a7-4ddf-8a38-458856cd36d6", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 0.75, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json b/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json deleted file mode 100644 index ecab7be..0000000 --- a/test/data/enm/study-NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-4ad357a1-06bf-497a-8ae0-8a39796b6e1b", - "owner": { - "substance": { - "uuid": "NWKI-ae67096a-fca6-3afc-bade-c362e3eeadc8" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - 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"uuid": "NWKI-4b147634-318e-478b-91fd-be570e516905", - "owner": { - "substance": { - "uuid": "NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.64 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json b/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json deleted file mode 100644 index b597119..0000000 --- a/test/data/enm/study-NWKI-4b60773a-f65a-438f-8299-286082243561.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-4b60773a-f65a-438f-8299-286082243561", - "owner": { - "substance": { - "uuid": "NWKI-905e44ef-3f7f-314d-add0-3e00439eaded" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 3.45 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json b/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json deleted file mode 100644 index 9ff1a22..0000000 --- a/test/data/enm/study-NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-4b72cf25-f21a-4add-a046-55ffa1030d9a", - "owner": { - "substance": { - "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null, - "Serum": { - "loValue": "PBS" - } - }, - "result": { - "unit": "nm", - "loValue": 73 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json b/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json deleted file mode 100644 index e2610b4..0000000 --- a/test/data/enm/study-NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-4b8cbc90-8984-4fa7-8e0d-24205b96917b", - "owner": { - "substance": { - "uuid": "NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json b/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json deleted file mode 100644 index 32505bc..0000000 --- a/test/data/enm/study-NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-4bb154cc-48e2-4286-bdb0-dd65cfff3bc3", - "owner": { - "substance": { - "uuid": "NWKI-4f1a3729-4a88-31bc-abca-7eb6503a73d4" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 220 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json b/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json deleted file mode 100644 index 9ea9830..0000000 --- a/test/data/enm/study-NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917.json +++ /dev/null @@ -1,55 +0,0 @@ -{ - "uuid": "NWKI-4bd8fefc-f691-4008-a426-c96ca2fda917", - "owner": { - "substance": { - "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_MELTING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000256", - "title": "4.2 Melting point / freezing point" - }, - "endpoint": "Melting Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Melting Point", - "conditions": { - "Decomposition": null, - "Sublimation": null - }, - "result": { - "unit": "Celsius", - "loQualifier": ">=", - "loValue": 1600 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json b/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json deleted file mode 100644 index fb484af..0000000 --- a/test/data/enm/study-NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-4bf35dc7-46c6-4803-95b7-96044af583bb", - "owner": { - "substance": { - "uuid": "NWKI-02981dd4-b7d0-34c8-a0ab-dd19a5a40865" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json b/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json deleted file mode 100644 index d1f90b4..0000000 --- a/test/data/enm/study-NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc.json +++ /dev/null @@ -1,65 +0,0 @@ -{ - "uuid": "NWKI-4bf8eec4-5811-473c-bb0a-0ef7d57278fc", - "owner": { - "substance": { - "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "Serum": { - "loValue": "PBS" - }, - "pH": { - "loValue": 7.54 - } - }, - "result": { - "unit": "mV", - "loValue": -42 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json b/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json deleted file mode 100644 index 6576d3a..0000000 --- a/test/data/enm/study-NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-4d004bc3-aed2-42c3-9973-2fbd846c917f", - "owner": { - "substance": { - "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DAF488" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "AlexaFluor488" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "AlexaFluor488" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json b/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json deleted file mode 100644 index 38731d0..0000000 --- a/test/data/enm/study-NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-4d3b2e50-6bd6-4ebb-b8d3-ae42c20aa399", - "owner": { - "substance": { - "uuid": "NWKI-0bb16a46-44a8-353e-ba07-b5835e323537" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 2900, - "errorValue": 1100 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json b/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json deleted file mode 100644 index 95d4cf8..0000000 --- a/test/data/enm/study-NWKI-4d9128fa-262f-418c-abc4-358f5d190e64.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-4d9128fa-262f-418c-abc4-358f5d190e64", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 80, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 42 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json b/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json deleted file mode 100644 index 656e8d5..0000000 --- a/test/data/enm/study-NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-4ed9f2c7-b2a3-44b9-ac42-cccc38e89ac8", - "owner": { - "substance": { - "uuid": "NWKI-c35f0f16-4616-3ec6-a142-4d274add68a2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 43.8, - "errorValue": 15.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json b/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json deleted file mode 100644 index 3689e65..0000000 --- a/test/data/enm/study-NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-4f1aee45-76f4-4e13-9498-f3ad8a6c0883", - "owner": { - "substance": { - "uuid": "NWKI-f4579554-a7fc-3e3f-991a-3b016207fa06" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390.2011.587903", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json b/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json deleted file mode 100644 index 8252417..0000000 --- a/test/data/enm/study-NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-4fac17a1-7915-4937-a74c-180f2ca61e5f", - "owner": { - "substance": { - "uuid": "NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Isoelectric Point", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ISOELECTRIC POINT", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 7 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json b/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json deleted file mode 100644 index f56c13c..0000000 --- a/test/data/enm/study-NWKI-50291d37-1850-4345-8632-4f912b91c7c0.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-50291d37-1850-4345-8632-4f912b91c7c0", - "owner": { - "substance": { - "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 3.12, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json b/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json deleted file mode 100644 index 922d316..0000000 --- a/test/data/enm/study-NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-50af5cfe-a337-4bff-b3a6-9d4048072b16", - "owner": { - "substance": { - "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 10, - "upQualifier": "<=", - "upValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json b/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json deleted file mode 100644 index 658fde4..0000000 --- a/test/data/enm/study-NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "NWKI-50d0445d-2ddf-48f0-97a5-f879b4b71de6", - "owner": { - "substance": { - "uuid": "NWKI-bb304faf-e44e-3103-b2a6-01b99c1c23de" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": -50, - "upQualifier": "<=", - "upValue": 38 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json b/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json deleted file mode 100644 index 198ca77..0000000 --- a/test/data/enm/study-NWKI-50d10201-2928-49a1-82e9-decaf8df67fd.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-50d10201-2928-49a1-82e9-decaf8df67fd", - "owner": { - "substance": { - "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json b/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json deleted file mode 100644 index 9f07516..0000000 --- a/test/data/enm/study-NWKI-50db9231-07eb-4856-8521-05b59b840557.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-50db9231-07eb-4856-8521-05b59b840557", - "owner": { - "substance": { - "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 5, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json b/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json deleted file mode 100644 index 8863843..0000000 --- a/test/data/enm/study-NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-50e51401-4fb9-4f7b-b958-ebe38f0d9a21", - "owner": { - "substance": { - "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 61 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json b/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json deleted file mode 100644 index 7fabee9..0000000 --- a/test/data/enm/study-NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-522b7192-5e42-46b5-91e4-7af1ad67f9f8", - "owner": { - "substance": { - "uuid": "NWKI-823e6217-d5b0-3c61-b886-768cfe726d38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 6.3, - "errorValue": 0.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json b/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json deleted file mode 100644 index 18f62ec..0000000 --- a/test/data/enm/study-NWKI-523df19a-2a87-409b-86ae-3e3b39945909.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DProtamine-2DRhodamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Rhodamine" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Rhodamine" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json b/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json deleted file mode 100644 index a91a639..0000000 --- a/test/data/enm/study-NWKI-530d1c38-f820-4849-b3bf-71605163bf76.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-530d1c38-f820-4849-b3bf-71605163bf76", - "owner": { - "substance": { - "uuid": "NWKI-245fc9be-5928-354e-8fd1-ae88663923f1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "mV", - "loValue": 0.0 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json b/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json deleted file mode 100644 index 467d343..0000000 --- a/test/data/enm/study-NWKI-545da080-c5eb-4a56-b10b-3390d3959238.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-545da080-c5eb-4a56-b10b-3390d3959238", - "owner": { - "substance": { - 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"pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -50.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json b/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json deleted file mode 100644 index b26a23a..0000000 --- a/test/data/enm/study-NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-54b3ecd6-68b4-434d-bdaf-32a8c5a6f4f7", - "owner": { - "substance": { - "uuid": "NWKI-dfbd99e5-c150-3a5e-9147-59255d42bebb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn301622h", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 331, - "errorValue": 19 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json b/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json deleted file mode 100644 index beed3ba..0000000 --- a/test/data/enm/study-NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-55f1adcf-2ae2-4f2f-b61b-b7fe65cf9650", - "owner": { - "substance": { - "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 36 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json b/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json deleted file mode 100644 index 2f3bfdf..0000000 --- a/test/data/enm/study-NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-560ae138-7a60-412e-bda8-15ef20c1c0d3", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 150, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json b/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json deleted file mode 100644 index c9f20ec..0000000 --- a/test/data/enm/study-NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-566d754e-ac76-4e29-a17e-6e7e815ba719", - "owner": { - "substance": { - "uuid": "NWKI-696f7b05-2dea-3a14-b080-fef134f4eff5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 12, - "errorValue": 3.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json b/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json deleted file mode 100644 index 12272f1..0000000 --- a/test/data/enm/study-NWKI-56fb25be-18b8-405b-be4f-be843856826b.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-56fb25be-18b8-405b-be4f-be843856826b", - "owner": { - "substance": { - "uuid": "NWKI-ed06c39e-c7f2-3173-bd74-35b8257544b5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - 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}, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "TMAT" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json b/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json deleted file mode 100644 index 87812ba..0000000 --- a/test/data/enm/study-NWKI-576e0d8e-08a0-440c-a937-b655c96f1827.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-576e0d8e-08a0-440c-a937-b655c96f1827", - "owner": { - "substance": { - "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -10.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json b/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json deleted file mode 100644 index edab41a..0000000 --- a/test/data/enm/study-NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-57abdeee-1b76-49b9-a3b3-a0e1e964f2d5", - "owner": { - "substance": { - 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} - }, - "result": { - "unit": "%", - "loValue": 60 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json b/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json deleted file mode 100644 index 409dfe2..0000000 --- a/test/data/enm/study-NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-57c3ba51-9194-4872-ae89-221f6ca96ec2", - "owner": { - "substance": { - "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - 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"loValue": 2.51 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json b/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json deleted file mode 100644 index 53d4573..0000000 --- a/test/data/enm/study-NWKI-58446ed4-a39a-4505-b359-f1d3008edf25.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-58446ed4-a39a-4505-b359-f1d3008edf25", - "owner": { - "substance": { - "uuid": "NWKI-845bf8fc-788d-38f2-be58-030f27c0d337" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json b/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json deleted file mode 100644 index ae788dc..0000000 --- a/test/data/enm/study-NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "NWKI-587bf2ec-a417-4834-8331-2272e3dd6d21", - "owner": { - "substance": { - "uuid": "NWKI-db562080-5286-327a-b813-6775c437385e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC-2DRCOOH" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "RCOOH" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "O=CO[H]" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "RCOOH" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json b/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json deleted file mode 100644 index 041e774..0000000 --- a/test/data/enm/study-NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-58c79586-50bf-460d-830d-a14c8ad70f8e", - "owner": { - "substance": { - "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null, - "Serum": { - "loValue": "cMEM" - } - }, - "result": { - "unit": "nm", - "loValue": 137 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json b/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json deleted file mode 100644 index 6a33b72..0000000 --- a/test/data/enm/study-NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-58ebc4fe-bf67-4eba-ae0b-02a0964fa04d", - "owner": { - "substance": { - "uuid": "NWKI-d39efcf3-d871-34c2-ac1c-b48f35bde877" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 25 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json b/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json deleted file mode 100644 index 006a4d3..0000000 --- a/test/data/enm/study-NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-5acb47b7-d27f-46e6-acfe-6b063106fa87", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - 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"loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json b/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json deleted file mode 100644 index 01dc975..0000000 --- a/test/data/enm/study-NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-60d8ff8a-334d-4aec-8840-fe9237f2ed52", - "owner": { - "substance": { - "uuid": "NWKI-8ef21404-e101-37c8-8206-32f526d75012" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - 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"uuid": "NWKI-61169e69-160a-4883-bb5b-57864cfaa226", - "owner": { - "substance": { - "uuid": "NWKI-c5e226b0-d405-32d5-a652-7f7f1f0eb55d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 81, - "errorValue": 12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json b/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json deleted file mode 100644 index 6090863..0000000 --- a/test/data/enm/study-NWKI-615e9046-2352-43b1-8061-c5863c389eba.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-615e9046-2352-43b1-8061-c5863c389eba", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 10, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json b/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json deleted file mode 100644 index f786e30..0000000 --- a/test/data/enm/study-NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-619ad025-d12a-40d6-b802-11c7bc1c5f0c", - "owner": { - "substance": { - "uuid": "NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn202116p", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "mV", - "loValue": -12.2, - "errorValue": 0.97 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json b/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json deleted file mode 100644 index d786c14..0000000 --- a/test/data/enm/study-NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-61ac7714-8bcb-4b22-9c49-8897a34459f8", - "owner": { - "substance": { - "uuid": "NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe2O3" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe2O3" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DAminoSPARK680" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Amino_SPARK680" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Amino_SPARK680" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json b/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json deleted file mode 100644 index 28d1eba..0000000 --- a/test/data/enm/study-NWKI-61cd966e-d293-4e74-810d-c96d7226a885.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-61cd966e-d293-4e74-810d-c96d7226a885", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json b/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json deleted file mode 100644 index 01e269b..0000000 --- a/test/data/enm/study-NWKI-61e74c49-caba-449a-ab8b-79ce619474c7.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-61e74c49-caba-449a-ab8b-79ce619474c7", - "owner": { - "substance": { - "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 100 - } - }, - "result": { - "unit": "%", - "loValue": 7 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json b/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json deleted file mode 100644 index 622ca2e..0000000 --- a/test/data/enm/study-NWKI-623ab83d-a129-4153-b30d-a653ecea4137.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-623ab83d-a129-4153-b30d-a653ecea4137", - "owner": { - "substance": { - "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json b/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json deleted file mode 100644 index 6a68dcd..0000000 --- a/test/data/enm/study-NWKI-62723dfc-941e-4efa-971d-d4061c205c37.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-62723dfc-941e-4efa-971d-d4061c205c37", - "owner": { - "substance": { - "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "BET", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 70 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json b/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json deleted file mode 100644 index 2cac26b..0000000 --- a/test/data/enm/study-NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-62c6c671-de0c-421a-9359-a4fb45ba7d0a", - "owner": { - "substance": { - "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DED-2DVT680" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Ethylene_Diamine" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "NCCN" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Ethylene_Diamine" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json b/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json deleted file mode 100644 index e052db2..0000000 --- a/test/data/enm/study-NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-632864fb-ead5-48bd-abdf-93ac2d6db3d2", - "owner": { - "substance": { - "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 10, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json b/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json deleted file mode 100644 index 0511926..0000000 --- a/test/data/enm/study-NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-6340f201-e40f-44e0-9cc0-bd91711785b2", - "owner": { - "substance": { - "uuid": "NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "mV", - "loValue": -21, - "errorValue": 5.16 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json b/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json deleted file mode 100644 index 07f6b02..0000000 --- a/test/data/enm/study-NWKI-637e25c9-223d-4680-b358-bf11344c0385.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-637e25c9-223d-4680-b358-bf11344c0385", - "owner": { - "substance": { - "uuid": "NWKI-6cab56b4-69d9-36e0-8c17-f467d08b2555" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -12.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json b/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json deleted file mode 100644 index 3888c56..0000000 --- a/test/data/enm/study-NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-63d64d8b-df0b-4dae-84e6-ae6bd3ac623c", - "owner": { - "substance": { - "uuid": "NWKI-7efe542f-264c-3b57-a516-410b730df963" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 28 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json b/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json deleted file mode 100644 index bebe406..0000000 --- a/test/data/enm/study-NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-63de74e0-3b63-435a-ad62-cc9645d3cc15", - "owner": { - "substance": { - "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 120 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json b/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json deleted file mode 100644 index 280bd5f..0000000 --- a/test/data/enm/study-NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-63df02d3-d55b-4a25-abfd-f73d2b958075", - "owner": { - "substance": { - "uuid": "NWKI-11bd7878-7fd9-365c-8f01-a452d9c7f4ec" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/tx800289z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 14 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json b/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json deleted file mode 100644 index 69cc83e..0000000 --- a/test/data/enm/study-NWKI-640f103a-1955-416a-a656-356884730cea.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-640f103a-1955-416a-a656-356884730cea", - "owner": { - "substance": { - "uuid": "NWKI-f3be029d-68f6-310a-87a4-ceffee1b4eda" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 8, - "upQualifier": "<=", - "upValue": 15 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json b/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json deleted file mode 100644 index 9262279..0000000 --- a/test/data/enm/study-NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-64af3435-8edb-4585-8167-3a4e8ed2ea6a", - "owner": { - "substance": { - "uuid": "NWKI-d0a80e1b-1b7f-35c7-9185-244ccc2c04c2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 88, - "errorValue": 12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json b/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json deleted file mode 100644 index 0d57126..0000000 --- a/test/data/enm/study-NWKI-64c482f1-7978-4160-8430-08ab8392c4a2.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-64c482f1-7978-4160-8430-08ab8392c4a2", - "owner": { - "substance": { - "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - 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"uuid": "NWKI-64f89bf1-d825-4cdb-8c59-87301ec7befc", - "owner": { - "substance": { - "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null, - "Serum": { - "loValue": "PBS" - } - }, - "result": { - "unit": "nm", - "loValue": 76 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json b/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json deleted file mode 100644 index 723c9f4..0000000 --- a/test/data/enm/study-NWKI-65922873-2b18-467a-8b0d-7d985d296419.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-65922873-2b18-467a-8b0d-7d985d296419", - "owner": { - "substance": { - "uuid": "NWKI-a95db64e-5499-371a-bdce-a4aa31f93218" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn200546k", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 0.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json b/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json deleted file mode 100644 index 7d66df9..0000000 --- a/test/data/enm/study-NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-65e45fc5-68ff-416e-b735-6e10a7eae383", - "owner": { - "substance": { - "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -20.7 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json b/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json deleted file mode 100644 index 773e990..0000000 --- a/test/data/enm/study-NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-65f7ef57-354f-4d82-ac39-a4e4aafb49b0", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Colon HT29", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 60, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json b/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json deleted file mode 100644 index 6207cdc..0000000 --- a/test/data/enm/study-NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-66eb1f6f-5461-4ab5-a476-38de7568df69", - "owner": { - "substance": { - "uuid": "NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 4.98, - "errorValue": 0.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json b/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json deleted file mode 100644 index b47921a..0000000 --- a/test/data/enm/study-NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-66eeb62c-4a93-4a73-bb8a-276e5552057b", - "owner": { - "substance": { - "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json b/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json deleted file mode 100644 index 16233ae..0000000 --- a/test/data/enm/study-NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-671aae68-2d9e-4cda-b5d5-136d0abcb830", - "owner": { - "substance": { - "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json b/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json deleted file mode 100644 index dc8980f..0000000 --- a/test/data/enm/study-NWKI-6784e795-4fb3-45e8-8fca-faeb49758250.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-6784e795-4fb3-45e8-8fca-faeb49758250", - "owner": { - "substance": { - "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 80, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json b/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json deleted file mode 100644 index 65b92e7..0000000 --- a/test/data/enm/study-NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-682685bb-7a15-4b40-abf0-1f94320c83c4", - "owner": { - "substance": { - "uuid": "NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b" - }, - 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"loValue": 8.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json b/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json deleted file mode 100644 index 38ec789..0000000 --- a/test/data/enm/study-NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-683a3a11-0be9-4fbe-a659-ce59d3de9778", - "owner": { - "substance": { - "uuid": "NWKI-0866f605-4cfb-32a2-a704-2cf2a8d3d9a6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 3.45 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json b/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json deleted file mode 100644 index 168188c..0000000 --- a/test/data/enm/study-NWKI-68518793-a783-4d93-94ce-118ae5876f5f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-68518793-a783-4d93-94ce-118ae5876f5f", - "owner": { - "substance": { - "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "TEM", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 19.2, - "errorValue": 4.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json b/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json deleted file mode 100644 index 911346a..0000000 --- a/test/data/enm/study-NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-6882b12d-f37a-4512-b33a-0cf922f61e1f", - "owner": { - "substance": { - "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "Shape", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Rutile-Anatase" - }, - "effects": [ - { - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Rutile-Anatase" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json b/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json deleted file mode 100644 index affbce0..0000000 --- a/test/data/enm/study-NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-691d614d-a497-4a8f-bfdc-a6375b2e5230", - "owner": { - "substance": { - "uuid": "NWKI-9a13f473-8a29-32e4-9653-ec03f5fb8923" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "CdSe" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "CdSe" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "AmphPolymer-2DPEG" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Amphiphillic_Polymer" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Amphiphillic_Polymer" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json b/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json deleted file mode 100644 index 962f9fd..0000000 --- a/test/data/enm/study-NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-692e09d2-5c50-48ac-99ae-5f29d6d76c6b", - "owner": { - "substance": { - "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - 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"uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DVT680-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Protamine" - 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"uuid": "NWKI-6baece3d-5a42-491e-8a52-1e6dcb6f9c16", - "owner": { - "substance": { - "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"uuid": "NWKI-6bbb3609-fac2-40f4-b5bd-5fe1a1752123", - "owner": { - "substance": { - "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - 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"uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 0 - } - }, - "result": { - "unit": "%", - "loValue": 2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json b/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json deleted file mode 100644 index 10e5309..0000000 --- a/test/data/enm/study-NWKI-7238a946-65a9-4767-9857-e655fb3766af.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-7238a946-65a9-4767-9857-e655fb3766af", - "owner": { - "substance": { - "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - 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"loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json b/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json deleted file mode 100644 index af2ff90..0000000 --- a/test/data/enm/study-NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-72e8aef4-1362-43e6-a9db-e5762369bdd5", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 1.5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json b/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json deleted file mode 100644 index 50ae4dd..0000000 --- a/test/data/enm/study-NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-749775b3-4a3a-4e7e-9fee-422114dc700d", - "owner": { - "substance": { - "uuid": "NWKI-438d1468-d5d7-3977-9dab-15a3a05add38" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 80, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json b/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json deleted file mode 100644 index 69bd58a..0000000 --- a/test/data/enm/study-NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-752659af-c93e-48c9-a3ba-84063d1c76d0", - "owner": { - "substance": { - "uuid": "NWKI-535c1a8b-71d0-3388-aaf5-e3a5c86510cb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -59.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json b/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json deleted file mode 100644 index 531f9a2..0000000 --- a/test/data/enm/study-NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-7558ca2a-c4f0-4c5c-b6b2-e6eabf75bad5", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Colon HT29", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 600, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 10 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json b/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json deleted file mode 100644 index b54e6b4..0000000 --- a/test/data/enm/study-NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-7580b78e-f6ab-4615-89e2-ec3487c23316", - "owner": { - "substance": { - "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DRhodamine-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Protamine" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Protamine" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json b/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json deleted file mode 100644 index b04e395..0000000 --- a/test/data/enm/study-NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-75c8848d-c75a-4628-a3e6-ebdac796acf9", - "owner": { - "substance": { - "uuid": "NWKI-566286ef-03eb-317a-8d9d-24fffefefc0b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Ag" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Ag" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "MESCoating" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "MES" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "SCCS(=O)(=O)[O-].[Na+]" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "MES" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json b/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json deleted file mode 100644 index 63a0b1d..0000000 --- a/test/data/enm/study-NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-75da2ea6-d0d3-4a13-8e26-43f82a437d8a", - "owner": { - "substance": { - "uuid": "NWKI-bb2f1a47-0260-3271-b9c3-edb850d15be9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1039/C4FD00117F", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "Å", - "loQualifier": ">=", - "loValue": 25, - "upQualifier": "<=", - "upValue": 30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json b/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json deleted file mode 100644 index 0141053..0000000 --- a/test/data/enm/study-NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-7663a389-7d00-4dca-84ce-ae8134f5c34d", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 10 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json b/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json deleted file mode 100644 index 36f5389..0000000 --- a/test/data/enm/study-NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-768421ee-d5b3-4964-9f46-fb1cbf0afc2f", - "owner": { - "substance": { - "uuid": "NWKI-144a9226-4b93-36a9-ba2d-6b6c4903357b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null, - "Serum": { - "loValue": "PBS" - } - }, - "result": { - "unit": "nm", - "loValue": 158 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json b/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json deleted file mode 100644 index b106fb7..0000000 --- a/test/data/enm/study-NWKI-76deec17-0c64-4888-83cd-468ed71b340d.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-76deec17-0c64-4888-83cd-468ed71b340d", - "owner": { - "substance": { - "uuid": "NWKI-4e62b022-02b9-35e7-a653-7ee317f54ae8" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3390/ijerph110908867", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 14, - "errorValue": 4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json b/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json deleted file mode 100644 index b048383..0000000 --- a/test/data/enm/study-NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-76fa4f88-0375-441b-ab01-f1c1a1003c83", - "owner": { - "substance": { - "uuid": "NWKI-0e10a982-4c8b-3f90-af19-8cd443575fc4" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 40, - "upQualifier": "<=", - "upValue": 70 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json b/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json deleted file mode 100644 index 828c348..0000000 --- a/test/data/enm/study-NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-77206c3d-0288-45eb-9c5c-6f5e5245e499", - "owner": { - "substance": { - "uuid": "NWKI-6ede15ea-8037-379f-933e-7b947e155c6a" - }, - "company": { - 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"uuid": "NWKI-7768d3c9-59f0-40c7-8c3f-0391d02d48cb", - "owner": { - "substance": { - "uuid": "NWKI-a03a76c5-85b2-3b10-b567-87ca006c15ac" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 11.8, - "errorValue": 3.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json b/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json deleted file mode 100644 index b96b9ff..0000000 --- a/test/data/enm/study-NWKI-778c56be-5ec6-4032-90fe-f5d965330f71.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-778c56be-5ec6-4032-90fe-f5d965330f71", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 100 - } - }, - "result": { - "unit": "%", - "loValue": 5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json b/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json deleted file mode 100644 index 368da84..0000000 --- a/test/data/enm/study-NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-77a0bdb0-e565-46c3-aacd-f5a21ca277ba", - "owner": { - "substance": { - "uuid": "NWKI-11ae9232-1521-31d6-9466-c902c43d94fe" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DTatPeptide" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Tat_Peptide" - 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"title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -54.6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json b/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json deleted file mode 100644 index 17175b1..0000000 --- a/test/data/enm/study-NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-788732bb-6b81-4d0b-a592-ddcf1c28215c", - "owner": { - "substance": { - "uuid": "NWKI-7680f6c2-68d8-3ee4-b84b-8107da3f6e19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - 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"substance": { - "uuid": "NWKI-52e8adb0-6aba-3e7f-bc0c-85cb36c394a2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "BET", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loQualifier": ">=", - "loValue": 300 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json b/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json deleted file mode 100644 index 65bd843..0000000 --- a/test/data/enm/study-NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-79a0ef0d-c979-4cb3-b2fd-548525f90784", - "owner": { - "substance": { - "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 35 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json b/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json deleted file mode 100644 index eca698d..0000000 --- a/test/data/enm/study-NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-79cd1b2b-5087-4093-a1bf-a35101e22425", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json b/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json deleted file mode 100644 index 25db6c1..0000000 --- a/test/data/enm/study-NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-7a9b2e95-0470-4a91-b2e3-f1190082b8ef", - "owner": { - "substance": { - "uuid": "NWKI-85b50517-fdea-3aa6-abbd-dd506393aaa5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - 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"title": "http://dx.doi.org/10.1016/j.envpol.2008.11.004", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 60 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json b/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json deleted file mode 100644 index 15df3ff..0000000 --- a/test/data/enm/study-NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152.json +++ /dev/null @@ -1,54 +0,0 @@ -{ - "uuid": "NWKI-7ad548f9-6e7a-42f8-9093-c57657cc0152", - "owner": { - "substance": { - "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_BOILING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000257", - "title": "4.3 Boiling point" - }, - "endpoint": "Boiling Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Boiling point", - "conditions": { - "Atm. 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{ - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Primarily gamma phase" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json b/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json deleted file mode 100644 index 3e0dce6..0000000 --- a/test/data/enm/study-NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-7dcedd15-3194-4b36-980e-ccf0d9f9cd64", - "owner": { - "substance": { - "uuid": "NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Average Length", - 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"uuid": "NWKI-7e264886-37ae-4a67-aeb4-f7050badc42f", - "owner": { - "substance": { - "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 3000, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 35 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json b/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json deleted file mode 100644 index fb72df9..0000000 --- a/test/data/enm/study-NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-7e2e36fe-303f-4576-a1e8-ffcee6b3ee4a", - "owner": { - "substance": { - "uuid": "NWKI-3481f716-18fa-39b3-aa54-4acb67877194" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - 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"uuid": "NWKI-47d254de-8242-3374-9ed3-085227d473cc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680" - 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}, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 25, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json b/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json deleted file mode 100644 index e5f4e5e..0000000 --- a/test/data/enm/study-NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93.json +++ /dev/null @@ -1,54 +0,0 @@ -{ - "uuid": "NWKI-81546ced-dc22-4cb5-8737-19aa4ad1de93", - "owner": { - "substance": { - "uuid": "NWKI-6e6a5fec-23c2-3fff-8522-a22689091196" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_BOILING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000257", - "title": "4.3 Boiling point" - }, - "endpoint": "Boiling Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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}, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Protamine" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Protamine" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json b/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json deleted file mode 100644 index b8d1c5d..0000000 --- a/test/data/enm/study-NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-884fb0d7-c429-49d6-ba3a-904e1fa119e2", - "owner": { - "substance": { - "uuid": "NWKI-d8f70c6c-3496-3ad3-8ab3-e4f08a178d30" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 91 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json b/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json deleted file mode 100644 index c0e9684..0000000 --- a/test/data/enm/study-NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-88797747-443e-44b0-90a0-ba8ffcf9365a", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - 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}, - "endpoint": "Particle Size", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "TEM", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 190, - "errorValue": 9 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json b/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json deleted file mode 100644 index dbbdafb..0000000 --- a/test/data/enm/study-NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-88a68961-fb9d-4409-89aa-295d10bf63b2", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json b/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json deleted file mode 100644 index 7f98e3d..0000000 --- a/test/data/enm/study-NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-88ebd7b5-2689-4ac1-86cc-b8b790bd5f9a", - "owner": { - "substance": { - "uuid": "NWKI-52edeff5-900d-3f5a-86ba-550e9b368239" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - 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"uuid": "NWKI-89883f1b-15a0-4ec6-9b78-095a087de0f1", - "owner": { - "substance": { - "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 144 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json b/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json deleted file mode 100644 index ba96883..0000000 --- a/test/data/enm/study-NWKI-89e3d898-31aa-4719-8579-7c93dde6274e.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-89e3d898-31aa-4719-8579-7c93dde6274e", - "owner": { - "substance": { - "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - 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"uuid": "NWKI-845bf8fc-788d-38f2-be58-030f27c0d337" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json b/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json deleted file mode 100644 index 6c286ca..0000000 --- a/test/data/enm/study-NWKI-8b87c7de-7545-494f-a082-c16729a18b4f.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-8b87c7de-7545-494f-a082-c16729a18b4f", - "owner": { - "substance": { - "uuid": "NWKI-0455b6e1-5203-37bb-a98b-20460acceda1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 3.64 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json b/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json deleted file mode 100644 index 957e68c..0000000 --- a/test/data/enm/study-NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839.json +++ /dev/null @@ -1,65 +0,0 @@ -{ - "uuid": "NWKI-8b8dfa72-0284-415c-b50c-22b3a8a9b839", - "owner": { - "substance": { - "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "Serum": { - "loValue": "PBS" - }, - "pH": { - "loValue": 7.15 - } - }, - "result": { - "unit": "mV", - "loValue": -27 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json b/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json deleted file mode 100644 index 4d6133e..0000000 --- a/test/data/enm/study-NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-8bb3beb0-5e80-4bfe-85ac-99b7aceebcad", - "owner": { - "substance": { - "uuid": "NWKI-ae0be5b8-266b-3b6a-825d-55f14b51cc99" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json b/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json deleted file mode 100644 index 53846d8..0000000 --- a/test/data/enm/study-NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-8bbc6716-d975-4f0c-afae-60dab49a06cc", - "owner": { - "substance": { - "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null, - "Serum": { - "loValue": "sfMEM" - } - }, - "result": { - "unit": "nm", - "loValue": 106 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json b/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json deleted file mode 100644 index 12a5336..0000000 --- a/test/data/enm/study-NWKI-8c25ade1-6431-4040-a52d-cb234978487e.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-8c25ade1-6431-4040-a52d-cb234978487e", - "owner": { - "substance": { - "uuid": "NWKI-afc33b0f-f6ce-3c1b-8a3d-cede13515323" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -7.15 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json b/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json deleted file mode 100644 index 891b834..0000000 --- a/test/data/enm/study-NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37.json +++ /dev/null @@ -1,54 +0,0 @@ -{ - "uuid": "NWKI-8d2443b8-7a23-4c59-988b-fd99323e4e37", - "owner": { - "substance": { - "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_BOILING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000257", - "title": "4.3 Boiling point" - }, - "endpoint": "Boiling Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Boiling point", - "conditions": { - "Atm. Pressure": null, - "Decomposition": null - }, - "result": { - "unit": "Celsius", - "loValue": 2230 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json b/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json deleted file mode 100644 index 6b1c072..0000000 --- a/test/data/enm/study-NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-8d772138-7e9c-4e23-a9ad-844af1713aa0", - "owner": { - "substance": { - "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 0 - } - }, - "result": { - "unit": "%", - "loValue": 5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json b/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json deleted file mode 100644 index f5d65d0..0000000 --- a/test/data/enm/study-NWKI-8db075a8-2314-4897-8bd6-c0afa961884e.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-8db075a8-2314-4897-8bd6-c0afa961884e", - "owner": { - "substance": { - "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 10, - "unit": "m" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json b/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json deleted file mode 100644 index fc01475..0000000 --- a/test/data/enm/study-NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-8ddf2a3a-2988-4255-8188-0c48855e7f58", - "owner": { - "substance": { - "uuid": "NWKI-f40bfb8a-1280-35a2-866c-42b5a3ce13e7" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.64 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json b/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json deleted file mode 100644 index ad0c5a0..0000000 --- a/test/data/enm/study-NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-8dfaf1c8-d49d-4280-ab04-6f55ce644942", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json b/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json deleted file mode 100644 index ae8fcbf..0000000 --- a/test/data/enm/study-NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-8e70a872-3806-4bf9-a8c9-ed59fbd3ca45", - "owner": { - "substance": { - "uuid": "NWKI-5adec23a-ab6a-350e-baec-cd088a4667d5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -16.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json b/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json deleted file mode 100644 index 30c5d43..0000000 --- a/test/data/enm/study-NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-8e945981-32ca-4c56-b481-45f7b8c630bd", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - 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}, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 14 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json b/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json deleted file mode 100644 index a938cf9..0000000 --- a/test/data/enm/study-NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-8f580200-09f2-41bb-b4e7-c374edca92fb", - "owner": { - "substance": { - "uuid": "NWKI-8090df08-f0f9-3c2f-8769-b51c2adaffc1" - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json b/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json deleted file mode 100644 index 692e877..0000000 --- a/test/data/enm/study-NWKI-90087566-2c17-4376-8083-810274cbf918.json +++ /dev/null @@ -1,52 +0,0 @@ -{ - "uuid": "NWKI-90087566-2c17-4376-8083-810274cbf918", - "owner": { - "substance": { - "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 27 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json b/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json deleted file mode 100644 index a38ae80..0000000 --- a/test/data/enm/study-NWKI-905cb971-3ccb-4db3-ae56-fc94178df572.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-905cb971-3ccb-4db3-ae56-fc94178df572", - "owner": { - "substance": { - "uuid": "NWKI-ede0d5b5-191a-3003-ac70-a97397ea7bb2" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn301622h", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "TEM", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 75, - "errorValue": 6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json b/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json deleted file mode 100644 index 60e03b4..0000000 --- a/test/data/enm/study-NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-90819c5d-2b87-424d-9ded-af4f9f46c16f", - "owner": { - "substance": { - "uuid": "NWKI-9a0a7a86-fd00-3835-9795-a4da7d9d1544" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DCY7" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cy7" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cy7" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json b/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json deleted file mode 100644 index de5695d..0000000 --- a/test/data/enm/study-NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-90bd6e98-90e7-4dd7-88cf-41608544e1fe", - "owner": { - "substance": { - "uuid": "NWKI-8f43d9fb-94ae-3d2b-8bb6-e8eb060e3b1b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 11 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json b/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json deleted file mode 100644 index 0e5d002..0000000 --- a/test/data/enm/study-NWKI-91102148-62b9-4896-a4a3-f379046ea916.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-91102148-62b9-4896-a4a3-f379046ea916", - "owner": { - "substance": { - "uuid": "NWKI-0b16e14c-47ab-3075-afc4-0713d06aa54c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json b/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json deleted file mode 100644 index 6e26950..0000000 --- a/test/data/enm/study-NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-913c2e41-919b-47e9-ba92-572ed92cdfe1", - "owner": { - "substance": { - "uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 3.14 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json b/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json deleted file mode 100644 index 4809823..0000000 --- a/test/data/enm/study-NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-92592b26-8cd8-49ed-b336-c4a26da733f9", - "owner": { - "substance": { - "uuid": "NWKI-ab2d4bdd-7a72-3e26-8552-5bb6027896bb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn202116p", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 665, - "errorValue": 46 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json b/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json deleted file mode 100644 index a87dd65..0000000 --- a/test/data/enm/study-NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-928470d1-bec3-4480-a7f7-65e67c7e5c92", - "owner": { - "substance": { - "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - 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}, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 186 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json b/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json deleted file mode 100644 index 34d83e3..0000000 --- a/test/data/enm/study-NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-933acfd4-a3d4-4e99-90c6-531e2f9e2356", - "owner": { - "substance": { - "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "FITC" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "FITC" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json b/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json deleted file mode 100644 index d78b33d..0000000 --- a/test/data/enm/study-NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-934c5c1a-86df-4901-9e9c-bf4a2ca93465", - "owner": { - "substance": { - "uuid": "NWKI-a33b26f0-2fc7-3aa1-9dd6-27380f725bfe" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Log_Reciprocal_EC50", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.49 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json b/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json deleted file mode 100644 index 699edd8..0000000 --- a/test/data/enm/study-NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-93603f88-ae1a-4819-843d-c38db4ce16c1", - "owner": { - "substance": { - "uuid": "NWKI-245fc9be-5928-354e-8fd1-ae88663923f1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - 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"uuid": "NWKI-93734b2b-c7e0-4cfc-936b-bd0aa4f5f31e", - "owner": { - "substance": { - "uuid": "NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 17 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json b/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json deleted file mode 100644 index d0ffdf1..0000000 --- a/test/data/enm/study-NWKI-93a75471-e455-444d-a639-c69931789c11.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-93a75471-e455-444d-a639-c69931789c11", - "owner": { - "substance": { - "uuid": "NWKI-18aebb90-aacb-3e15-b516-4d3683e9c27b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "BET", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 10 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json b/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json deleted file mode 100644 index 9638135..0000000 --- a/test/data/enm/study-NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-93d38c82-285c-4800-831e-0e4ccdb61c13", - "owner": { - "substance": { - "uuid": "NWKI-8c5b9350-2c03-3173-9615-cabfbe6929c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json b/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json deleted file mode 100644 index 6ce8d37..0000000 --- a/test/data/enm/study-NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-941a3ff6-4f05-493d-ad80-2ec04ab35035", - "owner": { - "substance": { - "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - 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"year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json b/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json deleted file mode 100644 index 94b94cf..0000000 --- a/test/data/enm/study-NWKI-94fd6054-3823-4ca0-b190-a54a3c38cc49.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 80, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 55 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json b/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json deleted file mode 100644 index c61b68a..0000000 --- a/test/data/enm/study-NWKI-9729ff94-c90e-4b2a-bc4a-6b45455ca4a2.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - 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}, - "Time": { - "loValue": 1, - "unit": "h" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json b/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json deleted file mode 100644 index 4d55c57..0000000 --- a/test/data/enm/study-NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-975f2041-3c03-47a0-8dea-cdcf547288e4", - "owner": { - "substance": { - "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - 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"uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 100 - } - }, - "result": { - "unit": "%", - "loValue": 23 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json b/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json deleted file mode 100644 index 5509d0e..0000000 --- a/test/data/enm/study-NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-9d6b99fd-4b45-4711-8ec3-a69204d695a7", - "owner": { - "substance": { - "uuid": "NWKI-c2ab6def-8305-3b78-958a-4657b3363e11" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - 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"year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 25, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json b/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json deleted file mode 100644 index f6bc19c..0000000 --- a/test/data/enm/study-NWKI-9e3a1375-4b1b-4380-9394-cb169871a210.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-9e3a1375-4b1b-4380-9394-cb169871a210", - "owner": { - "substance": { - "uuid": "NWKI-c8d9772c-e50e-3c71-986c-e45692150d71" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -12 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json b/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json deleted file mode 100644 index c80405e..0000000 --- a/test/data/enm/study-NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-9f29113f-574a-4ebb-bf4c-bc805d2ed845", - "owner": { - "substance": { - "uuid": "NWKI-e476955f-97bd-3e4c-8bef-03f56fe1b15b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 28.4, - "errorValue": 7.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json b/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json deleted file mode 100644 index b77092c..0000000 --- a/test/data/enm/study-NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-9f39a0b9-0fc2-41a2-b130-fca0712881ea", - "owner": { - "substance": { - "uuid": "NWKI-994226ce-df01-3717-b45d-376f645a8d47" - }, - 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"uuid": "NWKI-9f4fcd1f-7ab6-4993-9092-f2a266d44bcd", - "owner": { - "substance": { - "uuid": "NWKI-4551e0f7-e515-3cdb-a099-c2b99b04883d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json b/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json deleted file mode 100644 index 1ba0852..0000000 --- a/test/data/enm/study-NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-9f50cfff-1264-4196-8cf6-df7e0ea4e3f3", - "owner": { - "substance": { - "uuid": "NWKI-5adec23a-ab6a-350e-baec-cd088a4667d5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - 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"loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Amphiphillic_Polymer" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json b/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json deleted file mode 100644 index 891e761..0000000 --- a/test/data/enm/study-NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-a0041084-f829-4ebd-8708-f0ab1fc548fd", - "owner": { - "substance": { - "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - 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"uuid": "NWKI-a0202f3b-8e81-4aac-b85c-b4a9ee597300", - "owner": { - "substance": { - "uuid": "NWKI-5f88a526-3e3f-3da5-8082-8d1da0cdfefa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 150 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json b/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json deleted file mode 100644 index 647c5bb..0000000 --- a/test/data/enm/study-NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-a05efe4f-e78d-4d0d-8d5b-8c2a0f123326", - "owner": { - "substance": { - "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DRhodamine-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "PVA" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json b/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json deleted file mode 100644 index 2c332be..0000000 --- a/test/data/enm/study-NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-a077f85d-f2ee-4b1b-aada-3e194e724e86", - "owner": { - "substance": { - "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 60, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 24 - } - }, - "result": { - "unit": null, - "loValue": 95 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json b/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json deleted file mode 100644 index 36c9115..0000000 --- a/test/data/enm/study-NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-a08fdecf-eefe-4c5b-8e7c-19bd63a19702", - "owner": { - "substance": { - "uuid": "NWKI-e93603a1-8e0d-372a-8acf-48533b86ecb5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 3, - "unit": "h" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 45 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json b/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json deleted file mode 100644 index e6c2275..0000000 --- a/test/data/enm/study-NWKI-a0a7dbb4-fe64-4040-940c-62a0f9c8299c.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - 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{ - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": "mV", - "loValue": -55 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json b/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json deleted file mode 100644 index 009494a..0000000 --- a/test/data/enm/study-NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-a0d28be6-62ff-4ced-91ef-cd3fcee39631", - "owner": { - "substance": { - "uuid": "NWKI-ef8660fd-e624-3a94-91bc-ad5a6e47bcf3" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 33 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json b/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json deleted file mode 100644 index dbf467f..0000000 --- a/test/data/enm/study-NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-a0faadeb-60cf-4a7e-b904-1d463f87da8b", - "owner": { - "substance": { - "uuid": "NWKI-758c06ae-dc1f-3cbe-a409-91d14e5113d1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DED-2DVT750" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "PVA" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json b/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json deleted file mode 100644 index abc6a9b..0000000 --- a/test/data/enm/study-NWKI-a2074d37-5a26-4834-b65e-3816b8210262.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-a2074d37-5a26-4834-b65e-3816b8210262", - "owner": { - "substance": { - "uuid": "NWKI-ae63c430-7a80-35c3-828d-c859d81ce698" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 4.4, - "errorValue": 0.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json b/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json deleted file mode 100644 index d2abbd8..0000000 --- a/test/data/enm/study-NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-a24c3d6d-c9f3-4741-9390-285a44c0ee30", - "owner": { - "substance": { - "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -2.72 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json b/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json deleted file mode 100644 index 15cd41f..0000000 --- a/test/data/enm/study-NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-a2790aa9-23c6-4a18-b8a5-6153f6d03feb", - "owner": { - "substance": { - "uuid": "NWKI-5136670d-2925-31d0-8e12-811f8d67677f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 282, - "errorValue": 62 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json b/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json deleted file mode 100644 index 423b37d..0000000 --- a/test/data/enm/study-NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-a2b566c2-10f2-419e-9274-0386e24dff1c", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 200, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json b/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json deleted file mode 100644 index b678aa0..0000000 --- a/test/data/enm/study-NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-a2c0c4c4-72b9-4e53-8d19-74e3540576dc", - "owner": { - "substance": { - "uuid": "NWKI-56d49cc3-4a76-354b-9a77-4b2ecb2dbef0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json b/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json deleted file mode 100644 index 3901465..0000000 --- a/test/data/enm/study-NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-a2ddf7c5-e959-4091-a35c-ba626cd0e1fb", - "owner": { - "substance": { - "uuid": "NWKI-506de59a-ae92-361b-a934-0fdfa41101c0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DVT680-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json b/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json deleted file mode 100644 index 361c216..0000000 --- a/test/data/enm/study-NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-a30dd268-00ac-4e0c-a7e4-b96903513235", - "owner": { - "substance": { - "uuid": "NWKI-473ed1d8-ae5a-3c80-b3f7-50dbc4fd9a3b" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - 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"year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -9.23 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json b/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json deleted file mode 100644 index e53c169..0000000 --- a/test/data/enm/study-NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-a6e0ae37-6f1a-403c-9e07-7b9fb9334132", - "owner": { - "substance": { - "uuid": "NWKI-d63286d0-3205-3216-92ce-e9e2632aca9e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -15.6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json b/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json deleted file mode 100644 index d31dad1..0000000 --- a/test/data/enm/study-NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-a7636dce-30ed-41cb-8392-69454c3d7fb0", - "owner": { - "substance": { - "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 500, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 100 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json b/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json deleted file mode 100644 index 9e5c5e1..0000000 --- a/test/data/enm/study-NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-a7c2edb4-81b6-42db-ac24-f886e5ac4c55", - "owner": { - "substance": { - "uuid": "NWKI-b19125a9-4499-3e0e-aa0c-7792401f4900" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json b/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json deleted file mode 100644 index a8a9822..0000000 --- a/test/data/enm/study-NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843.json +++ /dev/null @@ -1,55 +0,0 @@ -{ - "uuid": "NWKI-a89bb7de-61c6-416e-8304-e7ec2111b843", - "owner": { - "substance": { - "uuid": "NWKI-2af8ed34-029d-3644-8327-23a596cfae0d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_MELTING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000256", - "title": "4.2 Melting point / freezing point" - }, - "endpoint": "Melting Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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"code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DArg7COOH" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "PVA" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json b/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json deleted file mode 100644 index b8cf6cb..0000000 --- a/test/data/enm/study-NWKI-a970b210-1925-41f3-82ec-d1191c19ab22.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-a970b210-1925-41f3-82ec-d1191c19ab22", - "owner": { - "substance": { - "uuid": "NWKI-c3d91296-7c2d-3971-b932-e671f2f83aa8" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 3.37, - "errorValue": 0.57 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json b/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json deleted file mode 100644 index 8aa1ed0..0000000 --- a/test/data/enm/study-NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-a994fb96-60a5-4ad0-9cb9-c566c7f0a76e", - "owner": { - "substance": { - "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - 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"uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 0 - } - }, - "result": { - "unit": "%", - "loValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json b/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json deleted file mode 100644 index 3711eb4..0000000 --- a/test/data/enm/study-NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-ae01c65a-e141-4a3e-997a-07068990a1ed", - "owner": { - "substance": { - "uuid": "NWKI-b14e37d1-8dbb-36d7-925c-4093c91a0e92" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - 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"textValue": "Fe2O3" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DPEG-2DED-2DAminoSPARK680" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Amino_SPARK680" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Amino_SPARK680" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json b/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json deleted file mode 100644 index 49230c0..0000000 --- a/test/data/enm/study-NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-af91a0ab-cd0a-4af2-9f08-5cbff02f2c02", - "owner": { - "substance": { - "uuid": "NWKI-69b604fb-e892-31ba-a6f5-feb6cb04effb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - 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"uuid": "NWKI-afaf9d66-7295-4597-b804-b1b6ff16380e", - "owner": { - "substance": { - "uuid": "NWKI-6821e372-3b17-3a56-8fac-f66115f24e5d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - 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"TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 33 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json b/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json deleted file mode 100644 index 7c662d2..0000000 --- a/test/data/enm/study-NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-afe3c4ca-7d1a-4d30-bff9-1a803f7664ec", - "owner": { - "substance": { - "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DRhodamine-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Rhodamine" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Rhodamine" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json b/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json deleted file mode 100644 index 4c9111e..0000000 --- a/test/data/enm/study-NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-b0ec7163-0d6b-455d-ac0b-0b20289bd60a", - "owner": { - "substance": { - "uuid": "NWKI-c6c08b6e-cb44-3e91-9669-0979667f12b3" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1063/1.2061873", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json b/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json deleted file mode 100644 index e6f2535..0000000 --- a/test/data/enm/study-NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-b163f566-9eeb-49fa-8a95-5cfcb0b308c3", - "owner": { - "substance": { - "uuid": "NWKI-21dbebfb-695f-3ff4-b7a4-bead2b52cf13" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - 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"uuid": "NWKI-b19640e8-70fc-4f59-9673-18d993638b49", - "owner": { - "substance": { - "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 2000, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 57 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json b/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json deleted file mode 100644 index 6d9e924..0000000 --- a/test/data/enm/study-NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-b2410a3b-3566-4d20-b44d-26cc260aa5ba", - "owner": { - "substance": { - "uuid": "NWKI-77fb742b-c676-3ad7-bd19-6d5ec1df62ad" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 20, - "upQualifier": "<=", - "upValue": 60 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json b/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json deleted file mode 100644 index 4436bd6..0000000 --- a/test/data/enm/study-NWKI-b253bb51-98c6-4542-ac49-1d4065642da9.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-b253bb51-98c6-4542-ac49-1d4065642da9", - "owner": { - "substance": { - "uuid": "NWKI-6b8a44a2-b835-3f75-903c-cf0a71a247c9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 10, - "unit": "m" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json b/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json deleted file mode 100644 index e01a491..0000000 --- a/test/data/enm/study-NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-b2df0522-985f-4afe-b6c1-7d044f4606b9", - "owner": { - "substance": { - "uuid": "NWKI-04962f10-34c8-3118-953e-d40d7244209c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1039/C4FD00117F", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "Å", - "loQualifier": ">=", - "loValue": 25, - "upQualifier": "<=", - "upValue": 30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json b/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json deleted file mode 100644 index e5356e5..0000000 --- a/test/data/enm/study-NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-b2f8f2b7-15bf-4898-86c4-ab0157786afa", - "owner": { - "substance": { - "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 6, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json b/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json deleted file mode 100644 index 414f209..0000000 --- a/test/data/enm/study-NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-b31df475-cec5-45fb-a010-e2af8524f5bd", - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 50 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json b/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json deleted file mode 100644 index 8f43272..0000000 --- a/test/data/enm/study-NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-b51e63f2-de24-4b10-838d-be0de2f1e0e1", - "owner": { - "substance": { - "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - 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"uuid": "NWKI-b60c415e-42fc-4af0-907e-ec6d3d07aebf", - "owner": { - "substance": { - "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Metabolic Activity", - "guideline": [ - "Tetrazolium Salt Cleavage" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Tetrazolium Salt Cleavage" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Metabolic_Activity", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 80 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json b/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json deleted file mode 100644 index f3d36ce..0000000 --- a/test/data/enm/study-NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-b6ad5d66-dd21-4d69-ba96-ae4e2623a8a0", - "owner": { - "substance": { - "uuid": "NWKI-c012600e-ca8e-31db-a7a8-d9f6a74e2464" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Isoelectric Point", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ISOELECTRIC POINT", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": 6.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json b/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json deleted file mode 100644 index c8936c5..0000000 --- a/test/data/enm/study-NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-b6ed421d-8819-43ca-b207-0adf297e57bc", - "owner": { - "substance": { - 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"pH": null - }, - "result": { - "unit": null, - "loValue": -3.34 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json b/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json deleted file mode 100644 index d71d108..0000000 --- a/test/data/enm/study-NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-b6f7f4d3-684a-44c0-b32d-34be02d1b364", - "owner": { - "substance": { - "uuid": "NWKI-8a968835-50ab-33df-bf5e-42de32d01c15" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Colon HT29", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 600, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 8 - } - }, - "result": { - "unit": null, - "loValue": 100 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json b/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json deleted file mode 100644 index dba8a73..0000000 --- a/test/data/enm/study-NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-b722b764-aa2b-4c82-b3d1-3f2f29fe9b59", - "owner": { - "substance": { - "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc" - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json b/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json deleted file mode 100644 index 2ac5bcc..0000000 --- a/test/data/enm/study-NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-b729c58e-a905-4e14-9074-3ee8e20d202c", - "owner": { - "substance": { - "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - 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"uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 25, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json b/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json deleted file mode 100644 index 30e5d1f..0000000 --- a/test/data/enm/study-NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-bcf835c5-7b6d-4dd4-99a9-318d9b5b4e90", - "owner": { - "substance": { - "uuid": "NWKI-3db8eb74-b206-31ad-8c1b-3569703c47cb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json b/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json deleted file mode 100644 index cde3b61..0000000 --- a/test/data/enm/study-NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-c27eb7d0-84da-440c-a01a-4f42f78e80fe", - "owner": { - "substance": { - "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - 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"uuid": "NWKI-c327ffa8-dbc1-4ce7-813d-d595b6d2eba8", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - 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"unit": "nm", - "loValue": 67 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json b/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json deleted file mode 100644 index f40e88c..0000000 --- a/test/data/enm/study-NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-c42bcc42-46a4-4f5a-8ada-254aa78f8c67", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - 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"title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "TEM", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 27.2, - "errorValue": 3.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json b/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json deleted file mode 100644 index 5def0c7..0000000 --- a/test/data/enm/study-NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-c4d59b68-76c2-4d23-85af-6b8a34e09c6e", - "owner": { - 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} - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json b/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json deleted file mode 100644 index d0bcbd2..0000000 --- a/test/data/enm/study-NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-c4fd9f71-f95f-4a63-b75b-0e545eeb6199", - "owner": { - "substance": { - "uuid": "NWKI-4e021275-ae4e-3d24-bdb8-40c6d8d9d6fc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - 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"uuid": "NWKI-c8075a01-07fe-4205-b282-e58f993175ab", - "owner": { - "substance": { - "uuid": "NWKI-de03994b-9d74-3e39-aa41-e7df34384442" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - 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"upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json b/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json deleted file mode 100644 index 3767277..0000000 --- a/test/data/enm/study-NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-cb2fb3aa-2d41-467d-897a-48c64f399e43", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - 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"unit": "mV", - "loValue": -51.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json b/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json deleted file mode 100644 index a4ac8f3..0000000 --- a/test/data/enm/study-NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-cc5b881d-450b-46a0-acf0-0b59464a24f8", - "owner": { - "substance": { - "uuid": "NWKI-7998492c-3902-3cc2-9f92-cdfae53cfc02" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - 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"result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json b/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json deleted file mode 100644 index 4d11907..0000000 --- a/test/data/enm/study-NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-cd4bbc5e-2a02-47f5-be5c-c2cb8d013a8b", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json b/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json deleted file mode 100644 index c8903d6..0000000 --- a/test/data/enm/study-NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-ce2bfbe2-1161-4c0e-ba26-281cd1f4c497", - "owner": { - "substance": { - "uuid": "NWKI-cfea3b7c-ee39-34ef-8349-16b1e7825861" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "FITC" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "FITC" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json b/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json deleted file mode 100644 index e5f1ff1..0000000 --- a/test/data/enm/study-NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0.json +++ /dev/null @@ -1,65 +0,0 @@ -{ - "uuid": "NWKI-ce622deb-7190-4284-a5e1-eee219c4d6b0", - "owner": { - "substance": { - "uuid": "NWKI-895a506b-c331-3576-bf9e-cbcde5822c11" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - 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"substance": { - "uuid": "NWKI-e93a9eb3-83df-3522-b417-7b3a379054a6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 280 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json b/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json deleted file mode 100644 index 3ce404a..0000000 --- a/test/data/enm/study-NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-ce73ec54-2cbf-4476-add4-d2ad07ccc89f", - "owner": { - "substance": { - "uuid": "NWKI-812e122b-8bee-350d-8aea-aaaa88ce84dd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json b/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json deleted file mode 100644 index 310dbef..0000000 --- a/test/data/enm/study-NWKI-ce97c205-4d65-4d45-8c55-00427a250663.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-ce97c205-4d65-4d45-8c55-00427a250663", - "owner": { - "substance": { - "uuid": "NWKI-2581f636-c16f-3680-9b3a-2bf0c8cab0b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -54.1 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json b/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json deleted file mode 100644 index 38a0aa2..0000000 --- a/test/data/enm/study-NWKI-cf25b134-5092-45c7-b48f-807252da6799.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-cf25b134-5092-45c7-b48f-807252da6799", - "owner": { - "substance": { - "uuid": "NWKI-33eda014-7b69-358a-93f0-e0ceef166a52" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -39.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json b/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json deleted file mode 100644 index 3d47bf2..0000000 --- a/test/data/enm/study-NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-cf2e640c-3ae5-4149-bd89-81fe25149e93", - "owner": { - "substance": { - "uuid": "NWKI-6b1b44fa-70c1-3034-9c4b-7efb334762e0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 95 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json b/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json deleted file mode 100644 index e1646bf..0000000 --- a/test/data/enm/study-NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-cf538ea0-cd50-4731-88f6-fccfee1145ad", - "owner": { - "substance": { - "uuid": "NWKI-9f37da26-8619-3eb1-9c29-e5f9ea09de54" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 221, - "errorValue": 0.8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json b/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json deleted file mode 100644 index 552da18..0000000 --- a/test/data/enm/study-NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-cf70e3af-ea76-4f8d-87cf-e51296a88be4", - "owner": { - "substance": { - "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 10 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json b/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json deleted file mode 100644 index c7acd32..0000000 --- a/test/data/enm/study-NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-cfd7a3eb-b360-4bac-9b3e-16b4698b9103", - "owner": { - "substance": { - "uuid": "NWKI-cc55dabc-3794-3853-9cf1-1e0bcf31fb69" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "SiO2" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "SiO2" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "COOH_Coating" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "COOH" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "O=CO[H]" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "COOH" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json b/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json deleted file mode 100644 index 6fea173..0000000 --- a/test/data/enm/study-NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d01537d1-37be-4bd6-904e-f63663b50e3f", - "owner": { - "substance": { - "uuid": "NWKI-1af17b5b-947a-3fd2-a000-cadf542dea4d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "Method type": "DLS", - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "MASS MEDIAN AERODYNAMIC DIAMETER", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 116, - "errorValue": 26 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json b/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json deleted file mode 100644 index 7fa1532..0000000 --- a/test/data/enm/study-NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-d03c4839-a764-49e5-9117-f1f25c396c3e", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 60, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 45 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json b/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json deleted file mode 100644 index 6287aac..0000000 --- a/test/data/enm/study-NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7.json +++ /dev/null @@ -1,93 +0,0 @@ -{ - "uuid": "NWKI-d09421ea-de27-446c-8dd4-c475e3a51de7", - "owner": { - "substance": { - "uuid": "NWKI-e5b618fd-dd48-3562-9a55-737ac7a68466" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - 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"uuid": "NWKI-d09c69c6-09df-4b84-952f-ba478fa185fd", - "owner": { - "substance": { - "uuid": "NWKI-e0ffe4e6-978c-367d-a011-bd700587c9fe" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/tx800289z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 20, - "upQualifier": "<=", - "upValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json b/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json deleted file mode 100644 index bc78f91..0000000 --- a/test/data/enm/study-NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d17c12f1-7406-4114-82b4-2e1bc70fb96f", - "owner": { - "substance": { - "uuid": "NWKI-666817c2-87cb-3826-92f8-e79a7b37957d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 60 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json b/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json deleted file mode 100644 index a9be5af..0000000 --- a/test/data/enm/study-NWKI-d19e51b2-561d-460c-8614-c85e7e887e92.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-d19e51b2-561d-460c-8614-c85e7e887e92", - "owner": { - "substance": { - "uuid": "NWKI-8a4b3e23-3327-3421-b20a-2e71939b44b1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC-2DGlutamicAcid" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json b/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json deleted file mode 100644 index 69831cf..0000000 --- a/test/data/enm/study-NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-d1eaef56-d795-4c70-8af6-5c4da695891e", - "owner": { - "substance": { - "uuid": "NWKI-f1cc0abb-2905-3699-be62-b238a21e6bad" - 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"uuid": "NWKI-d21a01d9-18f0-4c76-ac87-ce5792d8a1f6", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 600, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json b/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json deleted file mode 100644 index 11a9ae0..0000000 --- a/test/data/enm/study-NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d24f4f01-e311-4e37-a276-ee42155aa89f", - "owner": { - "substance": { - "uuid": "NWKI-e4dab3d9-2699-3a0b-9e9c-f257088142cc" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json b/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json deleted file mode 100644 index 1889acd..0000000 --- a/test/data/enm/study-NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-d32092e6-7b57-448b-b8d1-2c6b2eaf9e28", - "owner": { - "substance": { - "uuid": "NWKI-4832de65-5a92-3849-8061-729a2d83017e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Mean Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 38 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json b/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json deleted file mode 100644 index e46b0b5..0000000 --- a/test/data/enm/study-NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc.json +++ /dev/null @@ -1,54 +0,0 @@ -{ - "uuid": "NWKI-d363ac4e-29fd-4673-9b2a-5dfc42af0fbc", - "owner": { - "substance": { - "uuid": "NWKI-2af8ed34-029d-3644-8327-23a596cfae0d" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_BOILING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000257", - "title": "4.3 Boiling point" - }, - "endpoint": "Boiling Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Boiling point", - "conditions": { - "Atm. Pressure": null, - "Decomposition": null - }, - "result": { - "unit": "°C", - "loValue": 2230 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json b/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json deleted file mode 100644 index 8240bd9..0000000 --- a/test/data/enm/study-NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-d37b40f8-aadf-497e-b6f0-13a752fc4839", - "owner": { - "substance": { - "uuid": "NWKI-82bed004-9895-3bdf-822f-0b9906d2ee06" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json b/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json deleted file mode 100644 index 87a4147..0000000 --- a/test/data/enm/study-NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-d3946e40-9b64-499d-9782-b80aaeba64d0", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 0 - } - }, - "result": { - "unit": "%", - "loValue": 6 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json b/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json deleted file mode 100644 index 04a6113..0000000 --- a/test/data/enm/study-NWKI-d4333b24-64e1-448c-8b0a-880633a58698.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-d4333b24-64e1-448c-8b0a-880633a58698", - "owner": { - "substance": { - "uuid": "NWKI-f9f316e8-e8a9-37f9-877f-86519b3af20e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DFITC-2DProtamine" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json b/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json deleted file mode 100644 index d7b9c86..0000000 --- a/test/data/enm/study-NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d47eb16a-4a2e-4b2e-9dde-a413623cd2e1", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 15 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json b/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json deleted file mode 100644 index a8aef54..0000000 --- a/test/data/enm/study-NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-d4e7916c-9c3c-439c-96e6-e7fde7d866a2", - "owner": { - "substance": { - "uuid": "NWKI-61515bd0-5a80-3428-a093-01be1d677862" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 23.1, - "errorValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json b/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json deleted file mode 100644 index 2558ba9..0000000 --- a/test/data/enm/study-NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-d4f7c4f3-c00a-4572-a2fa-5f174ec7d412", - "owner": { - "substance": { - "uuid": "NWKI-c05becdf-4b9b-3599-9922-89235b2e10da" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -37 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json b/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json deleted file mode 100644 index c0c5207..0000000 --- a/test/data/enm/study-NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d51a019b-52b5-4263-98aa-a3f9535c9db8", - "owner": { - "substance": { - "uuid": "NWKI-0a6e319e-71fc-37f7-b88d-fbda2e07ccc1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 1000, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 92 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json b/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json deleted file mode 100644 index 6cced24..0000000 --- a/test/data/enm/study-NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d55980e2-2f36-417f-8243-9eb758f57dd3", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 50, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json b/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json deleted file mode 100644 index 2dfd8c3..0000000 --- a/test/data/enm/study-NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-d59c481d-eb03-4319-8994-a0e250e3edfe", - "owner": { - "substance": { - "uuid": "NWKI-9f46a2dd-dda3-3c99-81c0-8d904172c345" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -73.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json b/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json deleted file mode 100644 index 299fc2f..0000000 --- a/test/data/enm/study-NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-d5b02413-e80f-4df6-baa6-1da0cc43ef92", - "owner": { - "substance": { - "uuid": "NWKI-97a6970a-0e83-3890-ae6e-5e83b99c0325" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 21 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json b/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json deleted file mode 100644 index 3cd19ae..0000000 --- a/test/data/enm/study-NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-d5b501c9-3b68-4aaa-ab10-597a10525c6b", - "owner": { - "substance": { - "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "BiotinCoating" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "FITC" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "FITC" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json b/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json deleted file mode 100644 index 6d2e6ca..0000000 --- a/test/data/enm/study-NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7.json +++ /dev/null @@ -1,55 +0,0 @@ -{ - "uuid": "NWKI-d5e6f259-f334-47d7-882b-339469b2d6c7", - "owner": { - "substance": { - "uuid": "NWKI-67b71fb2-85c1-3130-bd4e-84da8bc05fc9" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_MELTING_SECTION", - "term": "http://semanticscience.org/resource/CHEMINF_000256", - "title": "4.2 Melting point / freezing point" - }, - "endpoint": "Melting Point", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Melting Point", - "conditions": { - "Decomposition": null, - "Sublimation": null - }, - "result": { - "unit": "°C", - "loQualifier": ">=", - "loValue": 1600 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json b/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json deleted file mode 100644 index 7a91c71..0000000 --- a/test/data/enm/study-NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538.json +++ /dev/null @@ -1,62 +0,0 @@ -{ - "uuid": "NWKI-d6228eb8-afa7-438c-92b2-d9b264aee538", - "owner": { - "substance": { - "uuid": "NWKI-a40c7554-4bd8-3938-82a9-bf9db1f7bc13" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nl0730155", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": { - "loValue": 6.5 - } - }, - "result": { - "unit": "mV", - "loValue": -45.4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json b/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json deleted file mode 100644 index 6e01994..0000000 --- a/test/data/enm/study-NWKI-d6634dea-1f89-439a-b8e2-14039dea0262.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-d6634dea-1f89-439a-b8e2-14039dea0262", - "owner": { - "substance": { - "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 15, - "upQualifier": "<=", - "upValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json b/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json deleted file mode 100644 index 7762122..0000000 --- a/test/data/enm/study-NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-d67ffc65-30bd-4fa7-8a1a-c2f9560de597", - "owner": { - "substance": { - "uuid": "NWKI-3d8aaa66-97d9-351b-9771-691300d5e97c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "Shape", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Anatase" - }, - "effects": [ - { - "endpoint": "SHAPE", - "conditions": { - "Remark": null - }, - "result": { - "unit": null, - "textValue": "Anatase" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json b/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json deleted file mode 100644 index 5763868..0000000 --- a/test/data/enm/study-NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-d7937308-6dab-41ce-a8fc-7752c77293a2", - "owner": { - "substance": { - "uuid": "NWKI-5ae4ae3d-db28-3647-9a7a-0c2e3d8076aa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -6.05 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json b/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json deleted file mode 100644 index 67738f0..0000000 --- a/test/data/enm/study-NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-d7aafa0b-c408-44e1-b288-9a479cb3dca1", - "owner": { - "substance": { - "uuid": "NWKI-5e5ed57f-33d3-39bb-9511-3604a0babf5e" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn2021056", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 12, - "errorValue": 2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json b/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json deleted file mode 100644 index 44b7101..0000000 --- a/test/data/enm/study-NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-d80cd93a-4e4b-4957-a555-d6ef17f06b1b", - "owner": { - "substance": { - "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 1000, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 70 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json b/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json deleted file mode 100644 index d37ce18..0000000 --- a/test/data/enm/study-NWKI-d8375116-28d0-4f57-84f8-91fe10910712.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-d8375116-28d0-4f57-84f8-91fe10910712", - "owner": { - "substance": { - "uuid": "NWKI-c93a144a-cd6d-3fe0-ab86-13adb168ccb1" - 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}, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 200 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json b/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json deleted file mode 100644 index 8f3ffd2..0000000 --- a/test/data/enm/study-NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "NWKI-d9cdbe0d-05e6-4d3b-8c05-1f957e5b317e", - "owner": { - "substance": { - "uuid": "NWKI-8196e92b-c46d-3c14-9410-e87992810710" - 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} - } - ] -} diff --git a/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json b/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json deleted file mode 100644 index f025230..0000000 --- a/test/data/enm/study-NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-dd500fc2-bd1d-4d86-8287-c900b9ea8e2e", - "owner": { - "substance": { - "uuid": "NWKI-d1c31022-c044-30fa-931e-07d96b6f04b5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1080/10934520600966177", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 150, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json b/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json deleted file mode 100644 index e0d016b..0000000 --- a/test/data/enm/study-NWKI-dd5da5bf-8a6f-44c0-9779-5fd77bb917e1.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - 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"" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "PVA-2DED-2DSuccAminoSPARK680" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Succinylated_Amino_SPARK680" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Succinylated_Amino_SPARK680" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json b/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json deleted file mode 100644 index eb5a8c1..0000000 --- a/test/data/enm/study-NWKI-de386b5b-748e-498c-9d9a-2b344e887980.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 18 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json b/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json deleted file mode 100644 index efd15e7..0000000 --- a/test/data/enm/study-NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-de90d49e-4055-46b1-9c9f-3106a61306d8", - "owner": { - "substance": { - "uuid": "NWKI-ae63c430-7a80-35c3-828d-c859d81ce698" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Hydrodynamic size", - "guideline": [ - "DLS" - ] - }, - "parameters": { - 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"TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "PVA" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json b/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json deleted file mode 100644 index 2f1454d..0000000 --- a/test/data/enm/study-NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-df09fcef-098d-4e01-9d19-0304cd36e96d", - "owner": { - "substance": { - "uuid": "NWKI-ad1d5068-29cd-3d8c-9ed0-44ed4ce06ddd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DVT680" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json b/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json deleted file mode 100644 index 983534a..0000000 --- a/test/data/enm/study-NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-df697673-f97c-4bc6-9187-ea0a8cad201c", - "owner": { - "substance": { - "uuid": "NWKI-ca37d03d-af78-3982-8ca0-76025e71fcf1" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - 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"uuid": "NWKI-e0b3dbc7-92eb-47b2-bacc-66c8ee3e589b", - "owner": { - "substance": { - "uuid": "NWKI-72ead9c0-f7c1-36f4-98c4-92faa7e81863" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - 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] -} diff --git a/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json b/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json deleted file mode 100644 index 91656b5..0000000 --- a/test/data/enm/study-NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "NWKI-e147c87e-1b3f-4f86-96b9-20917e46a195", - "owner": { - "substance": { - "uuid": "NWKI-ea2bb63b-fd2a-32c2-a41a-d0280abaf29f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1038/nnano.2011.10", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Log Reciprocal EC50", - "guideline": [ - "" - ] - }, - "parameters": { - "Cell line": "Escherichia coli cells" - }, - 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"category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - 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"uuid": "NWKI-e320cebf-22f8-447a-9546-62c66dff6321", - "owner": { - "substance": { - "uuid": "NWKI-c4c91023-5b41-3d6d-bb4f-ee1152926be0" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.chemosphere.2011.04.067", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "Cell number determination" - ] - }, - "parameters": { - "Cell line": "HaCaT", - "Method type": "Cell number determination" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - 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] -} diff --git a/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json b/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json deleted file mode 100644 index c1e608c..0000000 --- a/test/data/enm/study-NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-e3c1dfe2-2c80-4060-8c50-af6421bfd759", - "owner": { - "substance": { - "uuid": "NWKI-e518c122-5f4f-3611-8b30-56b671883e5c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "LDH Release", - "guideline": [ - "Lactate Dehydrogenase Activity" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Lactate Dehydrogenase Activity" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "LDH_Release", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - } - }, - "result": { - "unit": "%", - "loValue": 3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json b/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json deleted file mode 100644 index 8ae54c2..0000000 --- a/test/data/enm/study-NWKI-e802e276-7b5c-46b5-b825-5e61aa184245.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-e802e276-7b5c-46b5-b825-5e61aa184245", - "owner": { - "substance": { - "uuid": "NWKI-fdab53f4-57f3-3501-9bfc-a4ae95c4ec44" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - 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}, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es051043o", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "Concentration in cell", - "guideline": [ - "" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Concentration_in_cell", - "conditions": { - "Concentration in culture medium": { - "loValue": 100, - "unit": "ng/g" - }, - "Time": { - "loValue": 1, - "unit": "h" - } - }, - "result": { - "unit": "ug/ml", - "loValue": 27 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json b/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json deleted file mode 100644 index 7cd5346..0000000 --- a/test/data/enm/study-NWKI-e8912d4d-3491-46ef-8171-8fe1442e9136.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - 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"loValue": 9.5 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json b/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json deleted file mode 100644 index ffbff6a..0000000 --- a/test/data/enm/study-NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5.json +++ /dev/null @@ -1,73 +0,0 @@ -{ - "uuid": "NWKI-e8a0ef87-e997-4b5c-8e9d-38d04fc062a5", - "owner": { - "substance": { - "uuid": "NWKI-2a046d54-ea47-31b2-a370-e886e5a0a6bb" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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}, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "COOH-2DAmphPolymer" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "COOH" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "O=CO[H]" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - 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"unit": null, - "loValue": 20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json b/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json deleted file mode 100644 index 1daaaf9..0000000 --- a/test/data/enm/study-NWKI-ea31baba-b673-423e-a37c-4b9d21494550.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-ea31baba-b673-423e-a37c-4b9d21494550", - "owner": { - "substance": { - "uuid": "NWKI-4beee533-65e4-364a-adb7-7a520180de61" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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"textValue": "Triethoxycaprylsilane" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json b/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json deleted file mode 100644 index 4d794ea..0000000 --- a/test/data/enm/study-NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-ea56f38e-663f-4bdc-ab4a-1d9f204e7477", - "owner": { - "substance": { - "uuid": "NWKI-c7bee4e3-8884-3e29-ad8b-38decf6146fd" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json b/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json deleted file mode 100644 index 93b5504..0000000 --- a/test/data/enm/study-NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-eb7ec2b5-8964-4b78-88ac-4095399c8b33", - "owner": { - "substance": { - "uuid": "NWKI-3ccb7313-0905-322a-ac62-09adb667bc0f" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 300 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json b/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json deleted file mode 100644 index 2d709f4..0000000 --- a/test/data/enm/study-NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-ebafaab1-1dc2-41af-8065-393cb37943a0", - "owner": { - "substance": { - "uuid": "NWKI-bb97285c-a58f-34c0-aa16-d5eac02280fa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - 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}, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - "Cell line": "BEAS-2B", - "Method type": "PI uptake assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": "Non-toxic" - }, - "effects": [ - { - "endpoint": "Toxicity Classifier", - "conditions": { - "Doses/concentrations": { - "loValue": 50, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "textValue": "Non-toxic" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json b/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json deleted file mode 100644 index 5ca4601..0000000 --- a/test/data/enm/study-NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792.json +++ /dev/null @@ -1,59 +0,0 @@ -{ - "uuid": "NWKI-f0c20fa3-8c0b-4395-b633-0116213e3792", - "owner": { - "substance": { - "uuid": "NWKI-4358aa69-dec1-387a-b7ea-2238198ccdff" - 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] -} diff --git a/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json b/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json deleted file mode 100644 index a5e34e9..0000000 --- a/test/data/enm/study-NWKI-f17de7b3-3545-4488-a373-01a207c8230b.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "NWKI-f17de7b3-3545-4488-a373-01a207c8230b", - "owner": { - "substance": { - "uuid": "NWKI-a2d5a729-4ed1-3f1b-a5fd-3bd090a48aa5" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn301622h", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - 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"SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 40, - "upQualifier": "<=", - "upValue": 47 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json b/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json deleted file mode 100644 index 5c25d6f..0000000 --- a/test/data/enm/study-NWKI-f39c022c-a485-442c-8921-f798d46857cc.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-f39c022c-a485-442c-8921-f798d46857cc", - "owner": { - "substance": { - "uuid": "NWKI-8667bfb7-a5da-3eb0-b9d7-86e2c8f06f19" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 60, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json b/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json deleted file mode 100644 index 22c3743..0000000 --- a/test/data/enm/study-NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-f3f409b5-312e-4c14-bd8b-86983cbb69be", - 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"loValue": 2500, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 45 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json b/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json deleted file mode 100644 index 8b0456d..0000000 --- a/test/data/enm/study-NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-f4b25191-fdc0-42ad-a381-8d7a2d240077", - "owner": { - "substance": { - "uuid": "NWKI-509caa0e-0b8c-30e9-9592-48c6a83fe4ec" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/tx800289z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - 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"conditions": { - "Doses/concentrations": { - "loValue": 100, - "unit": "mg/L" - } - }, - "result": { - "unit": null, - "loValue": 98 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json b/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json deleted file mode 100644 index c99a23b..0000000 --- a/test/data/enm/study-NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-f5b27205-883e-4ca5-9b36-dcff899424e7", - "owner": { - "substance": { - "uuid": "NWKI-c10e9034-a37c-37f8-afa4-b0e1081c6856" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 13.5, - "errorValue": 4.2 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json b/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json deleted file mode 100644 index 8cf9b0f..0000000 --- a/test/data/enm/study-NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-f5ca7f44-a8bf-4334-b09e-5ef6d04d3dac", - "owner": { - "substance": { - "uuid": "NWKI-395bf212-b710-3385-9c23-715a7055b015" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 100 - } - }, - "result": { - "unit": "%", - "loValue": 4 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json b/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json deleted file mode 100644 index 0a267c6..0000000 --- a/test/data/enm/study-NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-f5e2ff69-a30f-4e11-b174-919b40b307a3", - "owner": { - "substance": { - "uuid": "NWKI-417f0133-8f2c-3255-bdcf-7d71ac295d00" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - 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"uuid": "NWKI-f618f090-2592-422e-834b-c043e330167f", - "owner": { - "substance": { - "uuid": "NWKI-57a03b07-0bb6-306c-ba30-71d5bc626385" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1016/j.soilbio.2013.01.016", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loQualifier": ">=", - "loValue": 20, - "upQualifier": "<=", - "upValue": 30 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json b/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json deleted file mode 100644 index 901ba78..0000000 --- a/test/data/enm/study-NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-f698f09b-0fe8-49a5-9653-1e19d87e87d4", - "owner": { - "substance": { - "uuid": "NWKI-b110d018-6de0-303b-afcc-6a5e1f5911aa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Specific Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loValue": 90 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json b/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json deleted file mode 100644 index 762b411..0000000 --- a/test/data/enm/study-NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-f70949ca-c8fc-4c53-9289-cfb49bbe721b", - "owner": { - "substance": { - "uuid": "NWKI-ec00c05f-0b35-3c5a-b16f-7a3560213764" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "pH": null - }, - "result": { - "unit": null, - "loValue": -9.34 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json b/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json deleted file mode 100644 index 05bf70a..0000000 --- a/test/data/enm/study-NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d.json +++ /dev/null @@ -1,58 +0,0 @@ -{ - "uuid": "NWKI-f72b366c-8a43-46dc-a05b-1a27ef7bf17d", - "owner": { - "substance": { - "uuid": "NWKI-97103918-5eeb-36a3-9981-3aa6dcef5d4c" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1002/smll.201002366", - "year": "2011", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Toxicity Classifier", - "guideline": [ - "PI uptake assay" - ] - }, - "parameters": { - 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"name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3762/bjnano.5.151", - "year": "2014", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "Percentage Viable Cells", - "guideline": [ - "MTT reduction assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "MTT reduction assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "Percentage_Viable_Cells", - "conditions": { - "Doses/concentrations": { - "loValue": 600, - "unit": "µg/mL" - }, - "Incubation Time": { - "loValue": 4 - } - }, - "result": { - "unit": null, - "loValue": 95 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json b/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json deleted file mode 100644 index f956924..0000000 --- a/test/data/enm/study-NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-f7a33447-5ffe-43d7-a7cd-744d88a99dde", - "owner": { - "substance": { - "uuid": "NWKI-ea48c37d-840a-30d2-9740-1198a7e2c3b6" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "Surface Area", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - "Remark": null - }, - "result": { - "unit": "m^2/g", - "loQualifier": ">=", - "loValue": 175, - "upQualifier": "<=", - "upValue": 225 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json b/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json deleted file mode 100644 index 0d8b8ad..0000000 --- a/test/data/enm/study-NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658.json +++ /dev/null @@ -1,65 +0,0 @@ -{ - "uuid": "NWKI-f7b60875-d81f-4dcb-87d0-2eaf6608c658", - "owner": { - "substance": { - "uuid": "NWKI-916751bb-8457-3844-87c0-ada4c6afd1ab" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/ja309812z", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "Zeta Potential", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "TESTMAT_FORM": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - "MEDIUM": null, - "Remark": null, - "Serum": { - "loValue": "sfMEM" - }, - "pH": { - "loValue": 8.11 - } - }, - "result": { - "unit": "mV", - "loValue": -20 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json b/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json deleted file mode 100644 index 8b7bb89..0000000 --- a/test/data/enm/study-NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a.json +++ /dev/null @@ -1,61 +0,0 @@ -{ - "uuid": "NWKI-f7d03856-5343-4baa-ad7a-c1c3722a2e5a", - "owner": { - "substance": { - "uuid": "NWKI-c0927a67-d21d-37e8-932d-fb1607e58aee" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.3109/17435390903276933", - "year": "2009", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002167_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002167", - "title": "BAO_0002167 Genotoxicity Assay" - }, - "endpoint": "DNA in Tail", - "guideline": [ - "Fpg-2Dmodified Comet Assay" - ] - }, - "parameters": { - "Cell line": "Caco-2 cell", - "Method type": "Fpg-2Dmodified Comet Assay" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "DNA_in_Tail", - "conditions": { - "Doses/concentrations": { - "loValue": 20, - "unit": "ug/cm^2" - }, - "FPG Content": { - "loValue": 100 - } - }, - "result": { - "unit": "%", - "loValue": 8 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json b/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json deleted file mode 100644 index 84157a7..0000000 --- a/test/data/enm/study-NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4.json +++ /dev/null @@ -1,92 +0,0 @@ -{ - "uuid": "NWKI-f7eebb4f-c892-4007-a01e-e2bad43b52c4", - "owner": { - "substance": { - "uuid": "NWKI-5172b34a-a6f6-398f-ace6-1d30e6bc9efa" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SURFACE_CHEMISTRY_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0000015", - "title": "4.30 Nanomaterial surface chemistry" - }, - "endpoint": "Unknown", - "guideline": [ - "" - ] - }, - "parameters": { - "DATA_GATHERING_INSTRUMENTS": null, - "Method details": null, - "SAMPLING": null, - "Type of method": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": null, - "DESCRIPTION": null, - "ELEMENT_OR_GROUP": { - "loQualifier": " ", - "loValue": "Fe3O4" - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "CORE" - } - }, - "result": { - "unit": null, - "textValue": "Fe3O4" - } - }, - { - "endpoint": "ATOMIC COMPOSITION", - "conditions": { - "COATING_DESCRIPTION": { - "loQualifier": " ", - "loValue": "CLIO-2DNH2" - }, - "DESCRIPTION": { - "loQualifier": " ", - "loValue": "Cross-2Dlinked_dextran" - }, - "ELEMENT_OR_GROUP": { - "loQualifier": " " - }, - "Remark": null, - "TYPE": { - "loQualifier": " ", - "loValue": "COATING" - } - }, - "result": { - "unit": null, - "textValue": "Cross-2Dlinked_dextran" - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json b/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json deleted file mode 100644 index 81c4e34..0000000 --- a/test/data/enm/study-NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc.json +++ /dev/null @@ -1,60 +0,0 @@ -{ - "uuid": "NWKI-f7f637bc-76dc-43a5-92ed-d770c4e059dc", - "owner": { - "substance": { - "uuid": "NWKI-fd891814-04d2-30bc-a0b6-cc3149bf75ec" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/es9016975", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - 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"uuid": "NWKI-d7e38d71-0fcb-3a23-8cbe-aae4ce82b33a" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": null, - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 3.37, - "errorValue": 0.57 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json b/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json deleted file mode 100644 index 9e53eca..0000000 --- a/test/data/enm/study-NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-f888f18c-4f44-4365-94ba-0bdeb0e73501", - "owner": { - "substance": { - "uuid": "NWKI-b6c86895-1b73-39ec-8bd2-0106e77a7673" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1073/pnas.0802878105", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 27 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json b/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json deleted file mode 100644 index dc499be..0000000 --- a/test/data/enm/study-NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab.json +++ /dev/null @@ -1,57 +0,0 @@ -{ - "uuid": "NWKI-f88dbef8-0f07-4a03-8bec-575095c52cab", - "owner": { - "substance": { - "uuid": "NWKI-ce7a2667-21e4-3bd2-b1b6-bd8c298e9df4" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - "name": "NanoWiki" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1021/nn3010087", - "year": "0", - "owner": "NanoWiki" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "Primary Particle Size", - "guideline": [ - "" - ] - }, - "parameters": { - "DISTRIBUTION_TYPE": null, - "TESTMAT_FORM": null - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PARTICLE SIZE", - "conditions": { - "Remark": null, - "SEQ_NUM": null - }, - "result": { - "unit": "nm", - "loValue": 24.6, - "errorValue": 5.3 - } - } - ] -} diff --git a/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json b/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json deleted file mode 100644 index c527736..0000000 --- a/test/data/enm/study-NWKI-f96d66db-233b-4b6f-906f-302f75470d03.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "NWKI-f96d66db-233b-4b6f-906f-302f75470d03", - "owner": { - "substance": { - "uuid": "NWKI-3fb9be70-8c15-3b78-94e7-5c3c88799818" - }, - "company": { - "uuid": "NWKI-9f4e86d0-c85d-3e83-8249-a856659087da", - 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"loValue": 226.4 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json b/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json deleted file mode 100644 index c65c5aa..0000000 --- a/test/data/enm/study-XLSX-012fa9ed-275d-43bf-996d-20ee50308991.json +++ /dev/null @@ -1,1016 +0,0 @@ -{ - "uuid": "XLSX-012fa9ed-275d-43bf-996d-20ee50308991", - "owner": { - "substance": { - "uuid": "XLSX-aacdfad8-f3d3-39f2-b662-0d8084e283ef" - }, - "company": { - "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db", - "name": "FP7 MARINA" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1371/journal.pone.0127174", - "year": "2015", - "owner": "P32 - KI" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - 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"code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "183", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json b/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json deleted file mode 100644 index 34a2590..0000000 --- a/test/data/enm/study-XLSX-0f82a6fb-2e01-4096-a414-6d17e18ffad5.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - 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"conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 211.139 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 350.807 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 5.587 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json b/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json deleted file mode 100644 index 61096e2..0000000 --- a/test/data/enm/study-XLSX-1005b3f5-639d-48e8-8f4e-962006996f96.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1005b3f5-639d-48e8-8f4e-962006996f96", - "owner": { - "substance": { - "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "151", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "151", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "elongated and rounded" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json b/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json deleted file mode 100644 index cb08c2f..0000000 --- a/test/data/enm/study-XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-10528600-01ff-4fcb-8ffd-eb1c14622464", - "owner": { - "substance": { - "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "143", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "143", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json b/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json deleted file mode 100644 index 46394d0..0000000 --- a/test/data/enm/study-XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-11423ba7-45fe-47f7-aa2f-1021853503a8", - "owner": { - "substance": { - "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "012", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "012", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 44.8 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 44.8 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 500 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json b/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json deleted file mode 100644 index 69cb005..0000000 --- a/test/data/enm/study-XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-115502dc-3a59-4d3c-b0e6-14ae7f7dd05e", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "075", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "075", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 25.08 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 25.08 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json b/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json deleted file mode 100644 index 9b91965..0000000 --- a/test/data/enm/study-XLSX-116c7102-9677-4acb-9923-e13a326e0848.json +++ /dev/null @@ -1,696 +0,0 @@ -{ - "uuid": "XLSX-116c7102-9677-4acb-9923-e13a326e0848", - "owner": { - "substance": { - "uuid": "XLSX-b4e4a8e9-6d27-3218-a243-7aa30560adb1" - }, - "company": { - "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db", - "name": "FP7 MARINA" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1371/journal.pone.0127174", - "year": "2015", - "owner": "P32 - KI" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "", - "guideline": [ - "ELISA / TNF-α release in culture medium" - ] - }, - "parameters": { - "CHMO:0002774": "Y", - "CLO_0000031": "HMDM (primary cells)", - "CLO_0000031 EFO_0004443": "ATCC", - "Cell culture conditions - Serum": "FBS (Gibco/413105K) ", - "Cell culture conditions - Serum concentration in growth medium": 0.1, - "Cell culture conditions - Serum concentration in treatment medium": 0.1, - "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)", - "Dispersion agent": "water with 0,05% BSA", - "NPO_1952": "N", - "NPO_1961": "N", - "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ", - "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 " - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 0, - "unit": "µg/ml" - }, - "Replicate": "Replicate 1", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 19.209 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 1, - "unit": "µg/ml" - }, - "Replicate": "Replicate 1", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 51.34 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 5, - "unit": "µg/ml" - }, - "Replicate": "Replicate 1", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 54.146 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 10, - "unit": "µg/ml" - }, - "Replicate": "Replicate 1", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 54.248 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 25, - "unit": "µg/ml" - }, - "Replicate": "Replicate 1", - 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}, - "result": { - "unit": "ng/ml", - "loValue": 8.806 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 0, - "unit": "µg/ml" - }, - "Replicate": "Replicate 2", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 17.204 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 1, - "unit": "µg/ml" - }, - "Replicate": "Replicate 2", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 25.185 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 5, - "unit": "µg/ml" - }, - "Replicate": "Replicate 2", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 38.635 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - 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} - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 50, - "unit": "µg/ml" - }, - "Replicate": "Replicate 3", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 7.371 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 75, - "unit": "µg/ml" - }, - "Replicate": "Replicate 3", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 5.037 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 100, - "unit": "µg/ml" - }, - "Replicate": "Replicate 3", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 4.846 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 0, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 16.168 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 1, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 25.371 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 5, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 42.205 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 10, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 87.953 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 25, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 37.918 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 50, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 14.972 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 75, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 9.695 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 100, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 8.52 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json b/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json deleted file mode 100644 index ae16a01..0000000 --- a/test/data/enm/study-XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-11ef2efa-2bf7-48b3-8c89-e3b993f25ff8", - "owner": { - "substance": { - "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "182", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "182", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json b/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json deleted file mode 100644 index f872a35..0000000 --- a/test/data/enm/study-XLSX-124615d0-026f-447e-989d-130ae65fc29a.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-124615d0-026f-447e-989d-130ae65fc29a", - "owner": { - "substance": { - "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "032", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "032", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 11 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 846 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json b/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json deleted file mode 100644 index b9a0217..0000000 --- a/test/data/enm/study-XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-1510c9ea-dae8-44cd-a1f6-d15ce9cfb6aa", - "owner": { - "substance": { - "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "154", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "154", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 10 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 10 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 1338 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json b/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json deleted file mode 100644 index a2fe805..0000000 --- a/test/data/enm/study-XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-151a3b5f-21cc-4eae-a99e-5a3776271a9f", - "owner": { - "substance": { - "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "178", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "178", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 101 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 170 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 180 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json b/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json deleted file mode 100644 index 5458577..0000000 --- a/test/data/enm/study-XLSX-15394a5e-dc9c-4109-a703-48bfece9354e.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-15394a5e-dc9c-4109-a703-48bfece9354e", - "owner": { - "substance": { - "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "192", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "192", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json b/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json deleted file mode 100644 index c04669a..0000000 --- a/test/data/enm/study-XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-15ffea9f-f9f9-4601-bf6a-4176fd20c40d", - "owner": { - "substance": { - "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "184", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "184", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 77.992 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json b/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json deleted file mode 100644 index b296bf5..0000000 --- a/test/data/enm/study-XLSX-166efb6a-eae4-481e-810b-57e1a6712b78.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-166efb6a-eae4-481e-810b-57e1a6712b78", - "owner": { - "substance": { - "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "111", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "111", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 101.589 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 111.998 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.416 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json b/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json deleted file mode 100644 index 3bb068e..0000000 --- a/test/data/enm/study-XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-16b44d12-07d4-4c81-97f8-e5068e683d8a", - "owner": { - "substance": { - "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "079", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "079", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1.732 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 4.308 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.103 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json b/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json deleted file mode 100644 index d9e68b3..0000000 --- a/test/data/enm/study-XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-178be221-af2d-46a4-a9c4-6cd303bf0f89", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "101", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "101", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "16HBE", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 48, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 80.042 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 144.629 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.583 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json b/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json deleted file mode 100644 index a5577e6..0000000 --- a/test/data/enm/study-XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-17b4b278-d0e5-4244-bec4-5bd49c1c5b2e", - "owner": { - "substance": { - "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "023", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "023", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 494.201 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1090.024 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 23.833 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json b/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json deleted file mode 100644 index 8425571..0000000 --- a/test/data/enm/study-XLSX-1828e284-b60f-4786-b26d-d581c7856f1e.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-1828e284-b60f-4786-b26d-d581c7856f1e", - "owner": { - "substance": { - "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "025", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "025", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1654.555 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2178.131 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 20.943 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json b/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json deleted file mode 100644 index fc20d3b..0000000 --- a/test/data/enm/study-XLSX-18ffa080-b48e-461b-960c-e23577e9011d.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-18ffa080-b48e-461b-960c-e23577e9011d", - "owner": { - "substance": { - "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "110", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "110", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1926.134 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2881.251 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 38.205 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json b/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json deleted file mode 100644 index 0dae113..0000000 --- a/test/data/enm/study-XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1a102274-4a1c-4401-b0fd-b7e4db80dd2d", - "owner": { - "substance": { - "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "182", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "182", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 24.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json b/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json deleted file mode 100644 index 4dde734..0000000 --- a/test/data/enm/study-XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-1ac4715c-b706-4b43-9ec9-323a6b11e21a", - "owner": { - "substance": { - "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "030", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "030", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 302.112 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2078.222 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 71.044 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json b/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json deleted file mode 100644 index 2f220c5..0000000 --- a/test/data/enm/study-XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1b097f33-a770-4c45-99f4-9d400e1bc809", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "170", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "170", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 24.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json b/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json deleted file mode 100644 index f7d550d..0000000 --- a/test/data/enm/study-XLSX-1b1c6745-05b3-46ef-a322-f2399b831032.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-1b1c6745-05b3-46ef-a322-f2399b831032", - "owner": { - "substance": { - "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "079", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "079", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 25.08 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 25.08 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json b/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json deleted file mode 100644 index 353d59c..0000000 --- a/test/data/enm/study-XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1c2549a4-d71e-4f9e-9d92-aa002568b9d9", - "owner": { - "substance": { - "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "184", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "184", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "circles, ellipses, rectangles or squares" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.5 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json b/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json deleted file mode 100644 index e3d6962..0000000 --- a/test/data/enm/study-XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1d43008c-9331-43a7-b5ef-79ecc1c85fe2", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "134", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "134", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2 g−1", - "loValue": 56 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json b/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json deleted file mode 100644 index 1422f27..0000000 --- a/test/data/enm/study-XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-1db4a2e8-b624-48b8-95be-c09f7af79adc", - "owner": { - "substance": { - "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "168", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "168", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 24.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json b/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json deleted file mode 100644 index c8c5268..0000000 --- a/test/data/enm/study-XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-1df27ead-0ce1-4b88-b3f5-6c738d2d2393", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "071", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "071", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 1, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 45.546 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 145.33 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.991 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json b/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json deleted file mode 100644 index 8ed19db..0000000 --- a/test/data/enm/study-XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-1df396e3-b0b0-48f5-a227-1d9ed7f08c1f", - "owner": { - "substance": { - "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "150", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "150", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "mES", - "Dispersion protocol": "Bath", - "Exposure duration,h": 240, - "Serum concentration,%": 0.15 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 14.691 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 23.02 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.333 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json b/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json deleted file mode 100644 index 9397487..0000000 --- a/test/data/enm/study-XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-1fa5b4c0-a1b6-479b-9b82-9a6dc476ef0f", - "owner": { - "substance": { - "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "003", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - 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"result": { - "unit": "ng/ml", - "loValue": 30.14 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 25, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 43.317 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 50, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 44.152 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 75, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 51.261 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 100, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 63.261 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json b/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json deleted file mode 100644 index 1473c8f..0000000 --- a/test/data/enm/study-XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-3064e0bc-9082-44a7-a4bd-3add51baca08", - "owner": { - "substance": { - "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "113", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "113", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "subangular to rounded" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.567 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json b/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json deleted file mode 100644 index 2e4cca6..0000000 --- a/test/data/enm/study-XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-30e50959-2e9e-4681-8da4-fc1ab241354c", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "144", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "144", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 132.853 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 151.197 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.734 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json b/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json deleted file mode 100644 index 253f17c..0000000 --- a/test/data/enm/study-XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-3161393e-b37f-4ff5-a4fd-359e79dc7cef", - "owner": { - "substance": { - "uuid": "XLSX-0bfa2e41-c6b6-3cbf-8a1e-73bf006768ab" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "026", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - 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"uuid": "XLSX-31da7451-4360-45c4-ae93-daa94821da85", - "owner": { - "substance": { - "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "037", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "037", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2494.318 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 27155.059 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 986.43 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json b/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json deleted file mode 100644 index 07dc072..0000000 --- a/test/data/enm/study-XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-34b4f996-cc95-4b5a-94c7-f4635657c399", - "owner": { - "substance": { - "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "159", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "159", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "SH-SY5Y", - "Dispersion protocol": "Tip", - "Exposure duration,h": 6, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1260.242 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1635.256 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 15.001 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json b/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json deleted file mode 100644 index f1c01d6..0000000 --- a/test/data/enm/study-XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-35d3520c-fa44-4fbf-9e1c-6a9495ee2f4b", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "075", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "075", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 72, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - 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"code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "018", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -14 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json b/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json deleted file mode 100644 index d9d2631..0000000 --- a/test/data/enm/study-XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-36575b6d-8c77-4be4-b386-5c71cf6e730d", - "owner": { - "substance": { - "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "031", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "031", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 11 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 846 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 209 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json b/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json deleted file mode 100644 index a344c8b..0000000 --- a/test/data/enm/study-XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "XLSX-37fcce91-c08d-4940-97fe-b7c4dec0c132", - "owner": { - "substance": { - "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "166", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "166", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loQualifier": ">=", - "loValue": 11.8, - "upQualifier": "<=", - "upValue": 13 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json b/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json deleted file mode 100644 index 9ad2f33..0000000 --- a/test/data/enm/study-XLSX-39c0229d-4603-46be-a045-295259f1be57.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-39c0229d-4603-46be-a045-295259f1be57", - "owner": { - "substance": { - "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f" - 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} - } - ] -} diff --git a/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json b/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json deleted file mode 100644 index a713be0..0000000 --- a/test/data/enm/study-XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-40d900a9-1e08-4cf9-bc21-19f695cfb19b", - "owner": { - "substance": { - "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "098", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "098", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 24, - 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"owner": { - "substance": { - "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "153", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "153", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Cup Horn" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 17.3 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 24.2 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 2767 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json b/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json deleted file mode 100644 index c6e9e78..0000000 --- a/test/data/enm/study-XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-41595fe0-3c7b-4725-b209-f0267aa83da7", - "owner": { - "substance": { - "uuid": "XLSX-adf890e9-3623-3a0e-b601-11f8e5e2f3cb" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "015", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - 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"uuid": "XLSX-41d9609b-1d68-442f-9896-03cc648e1240", - "owner": { - "substance": { - "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "022", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "022", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "sphere" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json b/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json deleted file mode 100644 index deee23e..0000000 --- a/test/data/enm/study-XLSX-422fff63-c923-410d-86d1-0a21e060ba0b.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-422fff63-c923-410d-86d1-0a21e060ba0b", - "owner": { - "substance": { - "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "031", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "031", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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"uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "027", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "027", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "sphere" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json b/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json deleted file mode 100644 index dd1196d..0000000 --- a/test/data/enm/study-XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-45aeb6a7-b132-404a-8702-f5988da7f94a", - "owner": { - "substance": { - "uuid": "XLSX-7d5a7a1b-5069-3256-b796-2361afcf3bfe" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "032", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "032", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Irregular entangled kinked and mostly bent " - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 79 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json b/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json deleted file mode 100644 index 1b7e940..0000000 --- a/test/data/enm/study-XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-45bd15a8-3413-4050-ae56-b76fd52cd676", - "owner": { - "substance": { - "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "022", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "022", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - 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"uuid": "XLSX-4983675e-d2fd-4212-bc78-f424507604c4", - "owner": { - "substance": { - "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "190", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "190", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": null, - "loQualifier": ">=", - "loValue": 26.3, - "upQualifier": "<=", - "upValue": 28.1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json b/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json deleted file mode 100644 index b8692b4..0000000 --- a/test/data/enm/study-XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-4a8aca48-c975-468b-9be8-03c6e735baa7", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "170", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "170", - "guideline": [ - "TEM" - ] - }, - "parameters": { - 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"owner": { - "substance": { - "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "008", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "008", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 18.8 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 18.8 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 35 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json b/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json deleted file mode 100644 index f971bef..0000000 --- a/test/data/enm/study-XLSX-4b73086a-515b-40b6-8e23-358337ba64f2.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-4b73086a-515b-40b6-8e23-358337ba64f2", - "owner": { - "substance": { - "uuid": "XLSX-aa7e2fd6-c054-35ed-a9d9-1f40c1d179a3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "138", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - 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"uuid": "XLSX-4be76f8a-a3f8-4a4e-99f1-6b0cb81cd1e5", - "owner": { - "substance": { - "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "186", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "186", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -43.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json b/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json deleted file mode 100644 index cc75144..0000000 --- a/test/data/enm/study-XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-4ce6ad29-3317-407c-8c7b-62a0701762c2", - "owner": { - "substance": { - "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "123", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "123", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Stirring" - }, - "reliability": { - "r_isRobustStudy": "false", - 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"uuid": "XLSX-4dd12e6c-c554-44e6-8428-732407473c6b", - "owner": { - "substance": { - "uuid": "XLSX-6fac9681-a5c7-337c-9e35-87c04579f0e6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "083", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "083", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -30 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json b/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json deleted file mode 100644 index 4171b79..0000000 --- a/test/data/enm/study-XLSX-4de28065-48d6-4388-82dd-ea35142f27f2.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-4de28065-48d6-4388-82dd-ea35142f27f2", - "owner": { - "substance": { - "uuid": "XLSX-00cd0ac9-9adc-38a5-9520-89ddd591f75f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "192", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "192", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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"code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "122", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 7.983 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 16.998 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.361 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json b/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json deleted file mode 100644 index a9baf58..0000000 --- a/test/data/enm/study-XLSX-4fad36a5-e05a-4e18-9e4d-9dd542742970.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - 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"topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "", - "guideline": [ - "ELISA / TNF-α release in culture medium" - ] - }, - "parameters": { - "CHMO:0002774": "Y", - "CLO_0000031": "HMDM (primary cells)", - "CLO_0000031 EFO_0004443": "ATCC", - "Cell culture conditions - Serum": "FBS (Gibco/413105K) ", - "Cell culture conditions - Serum concentration in growth medium": 0.1, - "Cell culture conditions - Serum concentration in treatment medium": 0.1, - "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)", - "Dispersion agent": "water with 0,05% BSA", - "NPO_1952": "N", - "NPO_1961": "N", - "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ", - "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 " - }, - "reliability": { - "r_isRobustStudy": "false", - 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"uuid": "XLSX-5735a27c-52fb-4fca-bd17-13780345dcf5", - "owner": { - "substance": { - "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "166", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "166", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 24.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json b/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json deleted file mode 100644 index 1684b84..0000000 --- a/test/data/enm/study-XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-5897d5fa-1a6b-4b73-9c96-702bcfce3fb5", - "owner": { - "substance": { - "uuid": "XLSX-bbff7bfc-273b-3dfb-be71-5afb33113e53" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "022", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "022", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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}, - "company": { - "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db", - "name": "FP7 MARINA" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1371/journal.pone.0127174", - "year": "2015", - "owner": "P32 - KI" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - Promega, G1780) ", - "guideline": [ - "Cytotoxicity using human monocyte-derived macrophages (HMDM)" - ] - }, - "parameters": { - "CHMO:0002774": "N", - "CLO_0000031": "HMDM", - "CLO_0000031 EFO_0004443": "Karolinska University Hospital, Stockholm, Sweden - buffy coats from healthy adult blood donors ", - "Cell culture conditions - Serum": "FBS (Gibco, 10500) ", - "Cell culture conditions - Serum concentration in growth medium": 0.1, - "Cell culture conditions - 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"name": "MODENA" - } - }, - "citation": { - "title": "162", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "162", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 25.938 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 41.782 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.634 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json b/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json deleted file mode 100644 index 3bcc805..0000000 --- a/test/data/enm/study-XLSX-62124f01-b636-4790-9fdf-2853ee2d0994.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-62124f01-b636-4790-9fdf-2853ee2d0994", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "058", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "058", - "guideline": [ - "ATP" - ] - }, - "parameters": { - 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"uuid": "XLSX-643341e8-2f22-493d-9800-e380396d8836", - "owner": { - "substance": { - "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "028", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "028", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - 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"uuid": "XLSX-658edc2a-ded0-4b88-b80f-638b0d726812", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "176", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "176", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loQualifier": ">=", - "loValue": 14.5, - "upQualifier": "<=", - "upValue": 15.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json b/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json deleted file mode 100644 index 2b09c49..0000000 --- a/test/data/enm/study-XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-668c62b3-24b5-4da1-a9dd-cf30be74ebcd", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "149", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "149", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 56.261 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json b/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json deleted file mode 100644 index 398476e..0000000 --- a/test/data/enm/study-XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-674ea779-2d07-44be-b7ba-0f9c39560ceb", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "149", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "149", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "elongated and rounded" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json b/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json deleted file mode 100644 index 0aa841b..0000000 --- a/test/data/enm/study-XLSX-677e4c55-92dd-4f7f-a8fe-230680fed7a3.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - 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"code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "119", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "angular" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.4 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json b/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json deleted file mode 100644 index 3ae75f5..0000000 --- a/test/data/enm/study-XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-68740430-324b-43d5-a2ee-75c5cd8bc5d9", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "062", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "062", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 4.761 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 15.33 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.423 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json b/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json deleted file mode 100644 index 1ba2672..0000000 --- a/test/data/enm/study-XLSX-6984e52f-8789-4364-b88f-77ad879365cc.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-6984e52f-8789-4364-b88f-77ad879365cc", - "owner": { - "substance": { - "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "155", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "155", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 35 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json b/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json deleted file mode 100644 index 47e83a9..0000000 --- a/test/data/enm/study-XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-69b01885-593c-44d8-8ca1-9ca34d9429df", - "owner": { - "substance": { - "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "131", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "131", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Stirring" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 60 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 60 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 68.8 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json b/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json deleted file mode 100644 index bfa56af..0000000 --- a/test/data/enm/study-XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-69dde5ab-16e5-40e1-81ed-b0ddbff8984d", - "owner": { - "substance": { - "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "179", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "179", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 101 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 170 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 180 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json b/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json deleted file mode 100644 index 2ab19b8..0000000 --- a/test/data/enm/study-XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-6a0eafba-58d6-4e8f-818e-dcb7924441b8", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "064", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "064", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "SK-OV-3", - "Dispersion protocol": "Bath", - "Exposure duration,h": "0,5", - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 30.547 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 95.681 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.605 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json b/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json deleted file mode 100644 index 30db8b1..0000000 --- a/test/data/enm/study-XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-6a7bfd1c-0eb9-4164-b3fd-a0d14afb7030", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "068", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "068", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "SK-OV-3", - "Dispersion protocol": "Bath", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 68.308 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 232.231 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 6.557 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json b/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json deleted file mode 100644 index 8bfbd41..0000000 --- a/test/data/enm/study-XLSX-6aa092f0-7bd2-451f-9519-76783e191a44.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-6aa092f0-7bd2-451f-9519-76783e191a44", - "owner": { - "substance": { - "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "188", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "188", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "near spherical rather than polyhedral with regular morphology" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json b/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json deleted file mode 100644 index b05ccd0..0000000 --- a/test/data/enm/study-XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-6b80cb8a-3c4e-47fc-9576-80bea2692acf", - "owner": { - "substance": { - "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "107", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "107", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "round/oblong" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.2 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json b/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json deleted file mode 100644 index 94d84f3..0000000 --- a/test/data/enm/study-XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-6bd1e6fa-d769-4f6e-9ce5-56449b76b157", - "owner": { - "substance": { - "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "189", - "year": "2015", - "owner": "MODENA" - 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} - } - ] -} diff --git a/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json b/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json deleted file mode 100644 index 4c9f9cd..0000000 --- a/test/data/enm/study-XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-6beceb2a-be58-434a-b0d8-486c7e52097d", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "100", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "100", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "16HBE", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - 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"owner": { - "substance": { - "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "113", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "113", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - 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"uuid": "XLSX-71afa2e5-14de-4df7-9c4e-21cae4d1cee2", - "owner": { - "substance": { - "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "150", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "150", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - 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"uuid": "XLSX-75963ed6-0523-4a45-a317-b6269a0d2cfe", - "owner": { - "substance": { - "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "166", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "166", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 106 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 178 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 482 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json b/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json deleted file mode 100644 index 4690293..0000000 --- a/test/data/enm/study-XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-75b996a0-f468-4f65-999e-59061f3ab8f1", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "169", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - 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"uuid": "XLSX-76487895-631e-40f3-88a3-b2741de4d910", - "owner": { - "substance": { - "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "035", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "035", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 67 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 4048 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 798 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json b/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json deleted file mode 100644 index 8500a2f..0000000 --- a/test/data/enm/study-XLSX-7677b950-92fc-4190-b1da-9830605be921.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7677b950-92fc-4190-b1da-9830605be921", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "119", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "119", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -46.1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json b/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json deleted file mode 100644 index 9fd0a46..0000000 --- a/test/data/enm/study-XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7801fc1f-f78e-439b-86d8-605aac5829f9", - "owner": { - "substance": { - "uuid": "XLSX-12620892-23e5-37f4-9644-a82c4240d695" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "150", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "150", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "elongated and rounded" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json b/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json deleted file mode 100644 index 45b5093..0000000 --- a/test/data/enm/study-XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-782237c1-fdd9-4a31-98f2-9cac8437cafa", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "170", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "170", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json b/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json deleted file mode 100644 index 138a032..0000000 --- a/test/data/enm/study-XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-78a5f27b-1b7b-4416-8ff7-b981d833eac7", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "103", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "103", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - 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"owner": { - "substance": { - "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "002", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "002", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.0 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json b/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json deleted file mode 100644 index 92f75ed..0000000 --- a/test/data/enm/study-XLSX-79993424-da62-4832-a593-a3fddf1215dc.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-79993424-da62-4832-a593-a3fddf1215dc", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "149", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "149", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - 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"category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "184", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json b/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json deleted file mode 100644 index 9dcaafb..0000000 --- a/test/data/enm/study-XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7b7d74b3-17f0-4d27-b99d-e8f9783c78f9", - "owner": { - "substance": { - "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "185", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "185", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 77.992 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json b/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json deleted file mode 100644 index e20eb42..0000000 --- a/test/data/enm/study-XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7da1da69-ac0c-430b-a5de-f15d0c51d1dd", - "owner": { - "substance": { - "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "190", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "190", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "polyhedral with irregular morphology" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.2 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json b/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json deleted file mode 100644 index 506d325..0000000 --- a/test/data/enm/study-XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-7de5aa9c-02e2-410a-a1ac-cc5518f2ddd6", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "070", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "070", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": "0,5", - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 42.557 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 117.994 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.017 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json b/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json deleted file mode 100644 index 03a9bbc..0000000 --- a/test/data/enm/study-XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7ee9bf0a-db20-45b9-bb5a-0a162e9fd458", - "owner": { - "substance": { - "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "166", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "166", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json b/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json deleted file mode 100644 index 8540bcf..0000000 --- a/test/data/enm/study-XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-7f7f4d4f-6adf-4505-96b8-2b362a3501a9", - "owner": { - "substance": { - "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "020", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "020", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -38.1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json b/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json deleted file mode 100644 index 6be1f23..0000000 --- a/test/data/enm/study-XLSX-8159e38e-6cd1-48b1-b257-725437255e1b.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-8159e38e-6cd1-48b1-b257-725437255e1b", - "owner": { - "substance": { - "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "038", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "038", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 27.696 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 915.193 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 35.5 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json b/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json deleted file mode 100644 index 034989b..0000000 --- a/test/data/enm/study-XLSX-832963bb-ee15-45e0-83de-ed54449e8369.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-832963bb-ee15-45e0-83de-ed54449e8369", - "owner": { - "substance": { - "uuid": "XLSX-a0d9ab63-ee03-3224-984a-4bd276e3ea3a" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "143", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "143", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 21.45 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 37.6 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json b/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json deleted file mode 100644 index d838797..0000000 --- a/test/data/enm/study-XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-83558a80-1c32-49b4-b8e3-2817f2e501bc", - "owner": { - "substance": { - "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "081", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "081", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 48, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 12.643 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 15.061 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.097 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json b/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json deleted file mode 100644 index 5e4084b..0000000 --- a/test/data/enm/study-XLSX-83c9e6b3-d952-47e2-8d20-9825a47cca5b.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - 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"uuid": "XLSX-95aee53d-3b33-4256-a631-60d4914942ee", - "owner": { - "substance": { - "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "131", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "131", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - 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"category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "143", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "elongated" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json b/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json deleted file mode 100644 index c2a6945..0000000 --- a/test/data/enm/study-XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-988b517f-37db-4a85-a9cd-5dd7ca6a7451", - 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"unit": "ug/ml", - "loValue": 2.051 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.632 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.023 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json b/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json deleted file mode 100644 index 8765aa4..0000000 --- a/test/data/enm/study-XLSX-99fae757-27bf-4193-9f98-119ee64ce72a.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-99fae757-27bf-4193-9f98-119ee64ce72a", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "134", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "134", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 21 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 25 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 228.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json b/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json deleted file mode 100644 index 7fc591f..0000000 --- a/test/data/enm/study-XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-9b36b98c-5251-4eb7-a94d-e133bdfe2037", - "owner": { - "substance": { - "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "153", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "153", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "irregular" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.36 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json b/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json deleted file mode 100644 index f6c3adc..0000000 --- a/test/data/enm/study-XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680.json +++ /dev/null @@ -1,1016 +0,0 @@ -{ - "uuid": "XLSX-9c8b990c-b31c-493e-8d3e-e1d4fa9ab680", - "owner": { - "substance": { - "uuid": "XLSX-ffd24485-3b05-3afe-b6ff-547800723f71" - }, - "company": { - "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db", - "name": "FP7 MARINA" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1371/journal.pone.0127174", - "year": "2015", - "owner": "P32 - KI" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "Cell viability - cell membrane damage: Lactate dehydrogenase assay (LDH) (CytoTox 96® Non-radioactive cytotoxicity assay - 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"uuid": "XLSX-a0b34fb3-ccd4-4dad-b1ff-4923745745cd", - "owner": { - "substance": { - "uuid": "XLSX-64e97bde-be4b-34fb-b216-85724e66b02a" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "153", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "153", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json b/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json deleted file mode 100644 index 0c2bf31..0000000 --- a/test/data/enm/study-XLSX-a0dab393-5a42-42b7-8424-ba352f42811f.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-a0dab393-5a42-42b7-8424-ba352f42811f", - "owner": { - "substance": { - "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "099", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "099", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 48, - "Serum concentration,%": 0 - 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"uuid": "XLSX-a336e49f-75ba-477d-acb6-7d6abe0eff8f", - "owner": { - "substance": { - "uuid": "XLSX-5a273d77-e518-3523-b377-c06f08182be1" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "021", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "021", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 14.2 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json b/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json deleted file mode 100644 index 4d6a936..0000000 --- a/test/data/enm/study-XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-a43d29ec-b7f4-40ef-a9fc-9178db646c83", - "owner": { - "substance": { - "uuid": "XLSX-acb82e6d-63d6-3cf4-a796-a281b1ba835f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "012", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "012", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "round" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json b/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json deleted file mode 100644 index 96a715d..0000000 --- a/test/data/enm/study-XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-a5483c3a-0b3e-400f-aff8-55dd5a1599bd", - "owner": { - "substance": { - "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "179", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "179", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json b/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json deleted file mode 100644 index c9e0702..0000000 --- a/test/data/enm/study-XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-a56cbeaa-ece4-4768-a70c-bc54bb329b78", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "176", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "176", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json b/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json deleted file mode 100644 index a625582..0000000 --- a/test/data/enm/study-XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-a5a35727-466c-4ffb-acb8-e33b79af6e3e", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "063", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "063", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - 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"substance": { - "uuid": "XLSX-5efaa24e-6eb5-3f1f-a9f4-680bc92364d6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "120", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "120", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - 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"uuid": "XLSX-a935b824-81e4-4226-8471-1ea5ee9a1462", - "owner": { - "substance": { - "uuid": "XLSX-254d54ae-e3ba-36d9-8dbd-c84d2296bb24" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "142", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "142", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 21.45 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 37.6 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json b/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json deleted file mode 100644 index 95bb970..0000000 --- a/test/data/enm/study-XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-aa833780-b59c-4cba-b7a2-6ea9ff4c0dfd", - "owner": { - "substance": { - "uuid": "XLSX-1a8410a0-279c-3e82-bdfb-ce96b534df9b" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "020", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "020", - 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"uuid": "XLSX-aaf7cd45-f792-4990-ad2b-a7fecfac4baf", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "103", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "103", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 159 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json b/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json deleted file mode 100644 index e1111f0..0000000 --- a/test/data/enm/study-XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-ab048fd9-e165-4ccb-aaf2-03d537f8c4aa", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "132", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "132", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "SH-SY5Y", - "Dispersion protocol": "Tip", - "Exposure duration,h": 3, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 324.686 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 606.981 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 11.292 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json b/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json deleted file mode 100644 index db451bf..0000000 --- a/test/data/enm/study-XLSX-ab328a52-255b-4273-b22e-c57d6992af2d.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-ab328a52-255b-4273-b22e-c57d6992af2d", - "owner": { - "substance": { - "uuid": "XLSX-a1b25bf2-6046-3c16-ba1c-3efb11b5a4d6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "156", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "156", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Irregular euhedral" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.36 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json b/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json deleted file mode 100644 index c950d3e..0000000 --- a/test/data/enm/study-XLSX-ab7c83f6-6b4f-4a9a-8171-1e65edbc5733.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - 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"unit": "nm", - "loValue": 5 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 13 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 5743 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json b/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json deleted file mode 100644 index febdcbf..0000000 --- a/test/data/enm/study-XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-abd6a23d-e9ed-494b-8fb4-f5e46a84c330", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "103", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - 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"uuid": "XLSX-ac16e65e-a24a-4453-8caf-c080a91c3fd2", - "owner": { - "substance": { - "uuid": "XLSX-2aef353b-440f-32a7-8447-1974997a69a8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "190", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "190", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 39 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 42 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json b/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json deleted file mode 100644 index 063b172..0000000 --- a/test/data/enm/study-XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-ac2c77a1-4e2f-44db-85f5-c75958709285", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "119", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - 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"uuid": "XLSX-ac6f6855-f918-42a8-acc0-df0852439343", - "owner": { - "substance": { - "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "027", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "027", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - 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"uuid": "XLSX-acbfcef0-41b2-4e88-8339-6bbed4bd54ad", - "owner": { - "substance": { - "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "131", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "131", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -30.6 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json b/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json deleted file mode 100644 index 44c7f0c..0000000 --- a/test/data/enm/study-XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-ad2eb9a2-29c3-4196-97ca-8c6b61e49d63", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "102", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "102", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - 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"owner": { - "substance": { - "uuid": "XLSX-f1b0af03-df66-3849-93cc-4ca706c0f751" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "161", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "161", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 53.134 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 75.966 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.913 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json b/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json deleted file mode 100644 index 7bb7618..0000000 --- a/test/data/enm/study-XLSX-b12efbec-ec75-456f-a51f-176f137037aa.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-b12efbec-ec75-456f-a51f-176f137037aa", - "owner": { - "substance": { - "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "151", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "151", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 21.8 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 41.2 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json b/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json deleted file mode 100644 index ff8aee0..0000000 --- a/test/data/enm/study-XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-b1b21fdc-b9aa-4783-a17f-379734d0574c", - "owner": { - "substance": { - "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "027", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "027", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 8 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json b/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json deleted file mode 100644 index ab47c18..0000000 --- a/test/data/enm/study-XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-b34234d4-bef1-4fef-ac7f-38435df1781d", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "133", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "133", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "SH-SY5Y", - "Dispersion protocol": "Tip", - "Exposure duration,h": 6, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1857.212 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 11349.986 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 379.711 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json b/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json deleted file mode 100644 index 7973cc7..0000000 --- a/test/data/enm/study-XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-b378a9c3-bc69-4b20-a261-b652321b0b4d", - "owner": { - "substance": { - "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "178", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "178", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json b/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json deleted file mode 100644 index e13d5ba..0000000 --- a/test/data/enm/study-XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-b3b95bc8-cb08-4ae0-aec1-df7d9ba1d4f5", - "owner": { - "substance": { - "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "004", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "004", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 575.472 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 779.306 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 8.153 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json b/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json deleted file mode 100644 index f38bb22..0000000 --- a/test/data/enm/study-XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-b49c9402-ac61-4b6e-83bf-6fbb749325f2", - "owner": { - "substance": { - "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "167", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "167", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 24.3 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json b/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json deleted file mode 100644 index d135c4c..0000000 --- a/test/data/enm/study-XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-b5b9a882-9563-4a07-a878-5a77385b69cc", - "owner": { - "substance": { - "uuid": "XLSX-ade46bc8-d87f-3f9b-afd0-11ca32e5caeb" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "178", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "178", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "mES", - "Dispersion protocol": "Bath", - "Exposure duration,h": 240, - "Serum concentration,%": 0.15 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 8.273 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 9.65 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.055 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json b/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json deleted file mode 100644 index 9c572ed..0000000 --- a/test/data/enm/study-XLSX-b65865f0-f8d0-43fa-9395-f8416d794590.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-b65865f0-f8d0-43fa-9395-f8416d794590", - "owner": { - "substance": { - "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "007", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - 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"uuid": "XLSX-b686cad9-ae22-4bde-bd69-96bd964a63be", - "owner": { - "substance": { - "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "079", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "079", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json b/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json deleted file mode 100644 index 86eb7eb..0000000 --- a/test/data/enm/study-XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-ba37cf7d-884b-49a2-947e-e162ea7bcf89", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "119", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "119", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "(m2/g)", - "loValue": 203.92 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json b/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json deleted file mode 100644 index 4740b08..0000000 --- a/test/data/enm/study-XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-bae43e10-571d-4733-97da-cbb0e72b13d3", - "owner": { - "substance": { - "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "185", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "185", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "circles, ellipses, rectangles or squares" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.5 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json b/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json deleted file mode 100644 index 5c19566..0000000 --- a/test/data/enm/study-XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-bb5f1e4f-085c-496a-8219-669e19a4955a", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "059", - "year": "2015", - "owner": "MODENA" - }, - 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"uuid": "XLSX-bb937f21-da37-4fa8-b1f0-1a0eb28ccf72", - "owner": { - "substance": { - "uuid": "XLSX-ad0a7571-a887-3611-a508-f32ad71f20be" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "078", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "078", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - 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"uuid": "XLSX-bd7e614c-d9df-41fa-964b-4e36f440cd06", - "owner": { - "substance": { - "uuid": "XLSX-d3a9ce39-6c15-3e4b-a5ce-5ea23e45ff16" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "113", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "113", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 14 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 22 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 238 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json b/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json deleted file mode 100644 index 44e9f50..0000000 --- a/test/data/enm/study-XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-bdde064a-bb90-4805-a737-81fa8c2775e6", - "owner": { - "substance": { - "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "186", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "186", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Tip", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 71.594 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 104.074 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1.299 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json b/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json deleted file mode 100644 index f222464..0000000 --- a/test/data/enm/study-XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-be9e53fb-9f30-402b-b0e3-e655a0d3d38f", - "owner": { - "substance": { - "uuid": "XLSX-2ca46b71-491d-3e73-9b4c-3fb885705274" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "157", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "157", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "irregular spheres (1–4 nm), euhedral particle (10–100 nm), fractal-like structures (100–200 nm), big irregular polyhedral parti" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.36 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json b/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json deleted file mode 100644 index 5d612cb..0000000 --- a/test/data/enm/study-XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-bf043d25-9771-44e7-bf9f-45d56af83b89", - "owner": { - "substance": { - "uuid": "XLSX-c42f434e-6295-3715-8a23-ce26f87642a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "188", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "188", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 28 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json b/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json deleted file mode 100644 index 6023696..0000000 --- a/test/data/enm/study-XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-bf0a5f5d-08e3-4fae-89c4-0e457d2b360a", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "052", - 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"unit": "ug/ml", - "loValue": 1.327 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json b/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json deleted file mode 100644 index bf791db..0000000 --- a/test/data/enm/study-XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-bf8e4645-e635-4c75-bf83-2ab6f09ea04d", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "055", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "055", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "SK-OV-3", - "Dispersion protocol": "Bath", - 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"owner": { - "substance": { - "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "128", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "128", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 33.663 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 49.612 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.638 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json b/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json deleted file mode 100644 index 498cfa7..0000000 --- a/test/data/enm/study-XLSX-c107487a-43f2-499d-836b-849500f07a7b.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-c107487a-43f2-499d-836b-849500f07a7b", - "owner": { - "substance": { - "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "028", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - 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"uuid": "XLSX-c7dbbf47-202e-4aef-ac0d-55da281074b2", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "134", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "134", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "espherical" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.2 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json b/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json deleted file mode 100644 index 85f5a2e..0000000 --- a/test/data/enm/study-XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-c801dfb0-b44b-406b-a89f-9a96c569c2a7", - "owner": { - "substance": { - "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "184", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "184", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - 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} - }, - "citation": { - "title": "032", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "032", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 298 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json b/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json deleted file mode 100644 index e3e8383..0000000 --- a/test/data/enm/study-XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-c8c7f7a3-450b-4441-828f-721af78fdebd", - "owner": { - "substance": { - "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "185", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "185", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json b/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json deleted file mode 100644 index 0cb7649..0000000 --- a/test/data/enm/study-XLSX-c9418c9d-3330-4495-882a-ea25e1480710.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-c9418c9d-3330-4495-882a-ea25e1480710", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "170", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "170", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "NIH/3T3", - "Dispersion protocol": "Bath", - "Exposure duration,h": 240, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.291 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1.385 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.044 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json b/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json deleted file mode 100644 index c1c6c46..0000000 --- a/test/data/enm/study-XLSX-c96f15d1-9601-4019-b878-cd25f10678a1.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-c96f15d1-9601-4019-b878-cd25f10678a1", - "owner": { - "substance": { - "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "135", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "135", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NCI-H292", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 318.394 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1041.903 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 28.94 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json b/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json deleted file mode 100644 index 3980b8a..0000000 --- a/test/data/enm/study-XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-c9c7dce2-9d8e-4f47-a93e-aac7c27f5f58", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "116", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "116", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 240.376 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 310.659 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.811 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json b/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json deleted file mode 100644 index c84e19e..0000000 --- a/test/data/enm/study-XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-c9d5a3c3-257e-41cf-a445-b6747c2f7fd2", - "owner": { - "substance": { - "uuid": "XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "019", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "019", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 14 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 15 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 95 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json b/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json deleted file mode 100644 index 80e797d..0000000 --- a/test/data/enm/study-XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-ca32b798-cba0-4a0a-89cd-5eeebef7dafc", - "owner": { - "substance": { - "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "039", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "039", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Entangled irregular, mostly bent, some no-onions " - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 125 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json b/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json deleted file mode 100644 index a836507..0000000 --- a/test/data/enm/study-XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-ca6e4f24-b2f5-41c0-ad58-13bbfa3265ab", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "149", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "149", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Bath" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 21.8 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 41.2 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 268 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json b/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json deleted file mode 100644 index a085383..0000000 --- a/test/data/enm/study-XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-caa33b31-8bb6-4f2b-a83c-1f11b0ad7da8", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "149", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - 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"uuid": "XLSX-cae175fa-1f2f-4d52-8d0b-0af9747925ca", - "owner": { - "substance": { - "uuid": "XLSX-9eb0db98-07c0-37fb-9fc3-7126d72252c4" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "131", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "131", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "sphere" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json b/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json deleted file mode 100644 index a064514..0000000 --- a/test/data/enm/study-XLSX-cb77a276-f477-4d81-8823-5786a7014f6c.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "XLSX-cb77a276-f477-4d81-8823-5786a7014f6c", - "owner": { - "substance": { - "uuid": "XLSX-5d7807f7-a13b-392f-88af-fe7885a67502" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "170", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "170", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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} - } - ] -} diff --git a/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json b/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json deleted file mode 100644 index 3c0a14c..0000000 --- a/test/data/enm/study-XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-cbe445cd-8bb9-49ef-bd3e-f3659f6bfb25", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "171", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "171", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 21.552 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 43.757 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.888 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json b/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json deleted file mode 100644 index 19ad8db..0000000 --- a/test/data/enm/study-XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-cd5d66d7-ae58-4bab-af4d-56f29f986660", - "owner": { - "substance": { - "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "099", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "099", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -39 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json b/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json deleted file mode 100644 index d5ac41f..0000000 --- a/test/data/enm/study-XLSX-cde8e68b-2c34-4b2b-967f-81fef93db218.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - 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"uuid": "XLSX-d23ad007-9b3d-4a16-b2c0-cdf4c2534c71", - "owner": { - "substance": { - "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "158", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "158", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "SH-SY5Y", - "Dispersion protocol": "Tip", - "Exposure duration,h": 3, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1903.353 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2354.616 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 18.051 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json b/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json deleted file mode 100644 index 75825f0..0000000 --- a/test/data/enm/study-XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d2c12e69-e474-495c-b4f0-c771e62e0859", - "owner": { - "substance": { - "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "008", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "008", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 48, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 81.133 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 178.493 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.894 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json b/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json deleted file mode 100644 index 70313de..0000000 --- a/test/data/enm/study-XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-d363410d-1bc7-400d-8ce5-7c260ef0a9fd", - "owner": { - "substance": { - "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "168", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "168", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json b/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json deleted file mode 100644 index 361be25..0000000 --- a/test/data/enm/study-XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d3a1c00c-e9db-4e87-9488-87655dbbb885", - "owner": { - "substance": { - "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "031", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "031", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 436.79 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 23662.55 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 929.03 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json b/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json deleted file mode 100644 index faf3af8..0000000 --- a/test/data/enm/study-XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-d4f527c0-325e-4eec-bf61-04093f1cc5d5", - "owner": { - "substance": { - "uuid": "XLSX-f94651ce-fd32-3306-8f89-32ffdf533be9" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "160", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "160", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 10 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 18 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 504.5 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json b/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json deleted file mode 100644 index afd876a..0000000 --- a/test/data/enm/study-XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d5aff4d1-abdf-4f9c-8c37-cb64aae72229", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "115", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "115", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 255.17 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 420.566 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 6.616 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json b/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json deleted file mode 100644 index 4a44b1b..0000000 --- a/test/data/enm/study-XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-d5dd4e79-8943-47c2-92ba-329b306d0896", - "owner": { - "substance": { - "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "028", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "028", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loValue": 3.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json b/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json deleted file mode 100644 index 2f8c0f9..0000000 --- a/test/data/enm/study-XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d619e752-f81e-4a88-94e0-f2d9ad2ecc86", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "072", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "072", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 2, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 53.613 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 175.758 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 4.886 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json b/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json deleted file mode 100644 index 861bbdd..0000000 --- a/test/data/enm/study-XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d7614e23-9ea3-4475-ac89-6a75c3626a3a", - "owner": { - "substance": { - "uuid": "XLSX-58c9f610-0fef-3009-8112-6ea05d863644" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "168", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "168", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "mES", - "Dispersion protocol": "Bath", - "Exposure duration,h": 240, - "Serum concentration,%": 0.15 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.698 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 5.866 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.087 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json b/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json deleted file mode 100644 index 2f56963..0000000 --- a/test/data/enm/study-XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e.json +++ /dev/null @@ -1,56 +0,0 @@ -{ - "uuid": "XLSX-d76ebf13-274d-4bc2-930f-406c9486be2e", - "owner": { - "substance": { - "uuid": "XLSX-ce148a7f-3da2-3fb8-9245-161eb6747522" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "179", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "179", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "m2/g", - "loQualifier": ">=", - "loValue": 14.5, - "upQualifier": "<=", - "upValue": 15.7 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json b/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json deleted file mode 100644 index e218953..0000000 --- a/test/data/enm/study-XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-d8feb7dd-549e-4f70-a119-5d76055e0172", - "owner": { - "substance": { - "uuid": "XLSX-dce22e5a-6ef2-3fd1-b1c8-9ebdb7bd5d2f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "061", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "061", - "guideline": [ - "ATP" - ] - }, - "parameters": { - "Cell line": "U-87 MG", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 4.727 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 20.401 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.627 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json b/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json deleted file mode 100644 index 69b61a0..0000000 --- a/test/data/enm/study-XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-dae320b7-859e-4d08-9c88-fb29d764f2f1", - "owner": { - "substance": { - "uuid": "XLSX-295d65e6-0d6e-3987-a67f-e4482fa28c71" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "097", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "097", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "16HBE", - "Dispersion protocol": "Stirring", - "Exposure duration,h": 48, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 688.979 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1269.72 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 23.23 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json b/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json deleted file mode 100644 index bdef34e..0000000 --- a/test/data/enm/study-XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-dbac069b-2183-4321-b2f7-cd528eeb7beb", - "owner": { - "substance": { - "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "081", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "081", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "oblong" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 2.4 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json b/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json deleted file mode 100644 index 81f4afe..0000000 --- a/test/data/enm/study-XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-dbc66ad9-b950-431f-8e0b-e8a185bcfc5a", - "owner": { - "substance": { - "uuid": "XLSX-53ac37fa-9e10-3f71-9d74-bc47f28880ff" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "185", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "185", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 16 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 40 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json b/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json deleted file mode 100644 index 519578a..0000000 --- a/test/data/enm/study-XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-dee1d5a1-8ad8-4eaf-816d-7e87f3a657e9", - "owner": { - "substance": { - "uuid": "XLSX-d7934c3e-9eac-34bc-8c60-4cf0c46e92a3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "005", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "005", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 44.545 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 154.891 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 4.414 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json b/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json deleted file mode 100644 index 829149d..0000000 --- a/test/data/enm/study-XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-df2adeb2-8c2b-431b-8efc-c9da4985a976", - "owner": { - "substance": { - "uuid": "XLSX-de76fc02-ef1f-310a-b61f-6aab5b586412" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "119", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "119", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 97.669 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 106.213 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.342 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json b/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json deleted file mode 100644 index 5678a23..0000000 --- a/test/data/enm/study-XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-df2b7cc9-9440-4450-93b4-0b01cfbe0470", - "owner": { - "substance": { - "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "135", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "135", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 8 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 12 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 532 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json b/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json deleted file mode 100644 index 266df66..0000000 --- a/test/data/enm/study-XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-df2f83d5-775f-4dd1-86f2-221bc53497ca", - "owner": { - "substance": { - "uuid": "XLSX-945d75a3-50b7-3655-8979-376d39096378" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "029", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "029", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1025.671 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 24233.231 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 928.302 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json b/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json deleted file mode 100644 index 9446809..0000000 --- a/test/data/enm/study-XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-df6f1803-e1f2-46a5-8ad2-04aa026cb430", - "owner": { - "substance": { - "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "155", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "155", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Irregular euhedral" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.36 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json b/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json deleted file mode 100644 index 87b1ed9..0000000 --- a/test/data/enm/study-XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-e0924b3c-5b20-4c17-b35b-9d1487aaf32c", - "owner": { - "substance": { - "uuid": "XLSX-75ca4d9f-546f-3d7d-a24e-d0d54809cbb3" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "039", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "039", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 11 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 1372 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json b/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json deleted file mode 100644 index 9486f37..0000000 --- a/test/data/enm/study-XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-e12f73c6-c0a0-43b6-b377-b8e4dcf5616c", - "owner": { - "substance": { - "uuid": "XLSX-95020ff3-17ee-3889-8a9f-f2555dc4a930" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "004", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "004", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "average round but not as monodisperse" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json b/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json deleted file mode 100644 index 94cec66..0000000 --- a/test/data/enm/study-XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-e1efd876-a5b6-47d6-9039-04f1b86cac77", - "owner": { - "substance": { - "uuid": "XLSX-5cd11301-7cf1-3402-aaf8-853e5ed8ccde" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "177", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "177", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio 1(20–250 nm) and aspect ratio 2:8.5 (10–450 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json b/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json deleted file mode 100644 index 38e4478..0000000 --- a/test/data/enm/study-XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-e25fcdda-3935-448e-a5bf-31932f003ed4", - "owner": { - "substance": { - "uuid": "XLSX-5d07b463-d3a8-35b1-826e-076f9f2328c8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "081", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "081", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Stirring" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 5 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 12 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 129 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json b/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json deleted file mode 100644 index e998db8..0000000 --- a/test/data/enm/study-XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-e2d1e541-119d-48fd-811e-ef18a2f4611c", - "owner": { - "substance": { - "uuid": "XLSX-56c58705-05c6-304f-bb42-a3a328e06319" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "182", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "182", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 106 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 178 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json b/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json deleted file mode 100644 index c4b48e8..0000000 --- a/test/data/enm/study-XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-e39305cf-0a69-4240-9f35-d79a2d429e40", - "owner": { - "substance": { - "uuid": "XLSX-251091e3-55d1-36b3-854c-d1933ec46461" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "027", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "027", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 38.1 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 38.1 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 144 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json b/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json deleted file mode 100644 index 74f4c2f..0000000 --- a/test/data/enm/study-XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-e3b26a17-3886-4b42-9f8b-51a75c92d549", - "owner": { - "substance": { - "uuid": "XLSX-36cbb933-ec3a-3d8b-b80f-0d5b6e76edc5" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "028", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "028", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "ZETA POTENTIAL", - "conditions": { - }, - "result": { - "unit": "mV", - "loValue": -43.8 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json b/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json deleted file mode 100644 index c1f3ce0..0000000 --- a/test/data/enm/study-XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-e3b53d4c-5816-4555-93a5-638024e7e6cc", - "owner": { - "substance": { - "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "038", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "038", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 11 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 1372 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 191 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json b/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json deleted file mode 100644 index 866add5..0000000 --- a/test/data/enm/study-XLSX-e4d153a8-15a4-473b-a649-a8f173015876.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-e4d153a8-15a4-473b-a649-a8f173015876", - "owner": { - "substance": { - "uuid": "XLSX-d4f2714a-a7f6-305a-af41-18d8129fef13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "184", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "184", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 47.76 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1484.384 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 57.465 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json b/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json deleted file mode 100644 index 86a59bf..0000000 --- a/test/data/enm/study-XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-e4ec31d9-12a2-492c-8912-6a1caf42d220", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "176", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "176", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 101 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 170 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 285 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json b/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json deleted file mode 100644 index a6cfff6..0000000 --- a/test/data/enm/study-XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-e56d0702-5753-4c06-91bc-637bf5355ce3", - "owner": { - "substance": { - "uuid": "XLSX-38666e26-8f8e-37a4-b97c-728a1e5aa0f2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "038", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "038", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "highly bend, entangled" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 125 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json b/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json deleted file mode 100644 index 3126565..0000000 --- a/test/data/enm/study-XLSX-e70a0515-81c5-49ef-b2e4-27897942675a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-e70a0515-81c5-49ef-b2e4-27897942675a", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "147", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "147", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 928.524 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 1222.908 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 11.775 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json b/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json deleted file mode 100644 index 21edb20..0000000 --- a/test/data/enm/study-XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-e7aa3d69-db5c-4a6f-b562-22643a5eaae8", - "owner": { - "substance": { - "uuid": "XLSX-498d791a-4c0f-3eab-bb2b-bd554637d9af" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "135", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "135", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Two structures found; type 1 show agglomerates in the 50–1500 nm range" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.524 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json b/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json deleted file mode 100644 index 93a877e..0000000 --- a/test/data/enm/study-XLSX-e7dab684-dd3d-4054-a343-31706a073bf6.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-e7dab684-dd3d-4054-a343-31706a073bf6", - "owner": { - "substance": { - "uuid": "XLSX-92788191-34d9-39b4-aa9c-503da51fc1a6" - }, - "company": { - 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"loValue": 1575.14 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 14.013 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json b/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json deleted file mode 100644 index 7cab232..0000000 --- a/test/data/enm/study-XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-e85460d4-1d0a-4cdf-aea6-7025bca3a403", - "owner": { - "substance": { - "uuid": "XLSX-0d71a921-0e8d-3f25-8deb-20478b7e884b" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "127", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "127", - "guideline": [ - 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"name": "MODENA" - } - }, - "citation": { - "title": "014", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "014", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 59.445 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 297.41 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 9.519 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json b/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json deleted file mode 100644 index 281ed2c..0000000 --- a/test/data/enm/study-XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-f1aa6695-5545-4b13-95fd-614629bfe92b", - "owner": { - "substance": { - "uuid": "XLSX-d6285533-0204-3884-a3d8-1dffdcde6324" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "067", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0010001_SECTION", - "term": "http://purl.bioontology.org/ontology/bao#BAO_0010001", - "title": "BAO_0010001 ATP Assay" - }, - "endpoint": "067", - "guideline": [ - "ATP" - ] - }, - "parameters": { - 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"uuid": "XLSX-f1d098ec-d929-4410-a1af-f720036f834d", - "owner": { - "substance": { - "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "033", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "033", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - 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"code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "113", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "(m2/g)", - "loValue": 189.16 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json b/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json deleted file mode 100644 index c11d851..0000000 --- a/test/data/enm/study-XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-f3369e08-9403-44dd-b930-7e6ad8debaa8", - "owner": { - "substance": { - "uuid": "XLSX-a44564c5-1458-3e3b-aca7-d63f5221d2a8" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "183", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "183", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 106 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 178 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json b/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json deleted file mode 100644 index 026cfa6..0000000 --- a/test/data/enm/study-XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4.json +++ /dev/null @@ -1,72 +0,0 @@ -{ - "uuid": "XLSX-f34d9633-f73f-454a-91ea-ef756cb9ade4", - "owner": { - "substance": { - "uuid": "XLSX-2ca46b71-491d-3e73-9b4c-3fb885705274" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "157", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "157", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Vortexing" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 100 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 100 - } - }, - { - "endpoint": "SIZE IN SITU", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 465 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json b/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json deleted file mode 100644 index 5c49c65..0000000 --- a/test/data/enm/study-XLSX-f39a60aa-b599-4d09-b344-2b6480f14720.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-f39a60aa-b599-4d09-b344-2b6480f14720", - "owner": { - "substance": { - "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "154", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "154", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Irregular euhedral" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.36 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json b/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json deleted file mode 100644 index 503e399..0000000 --- a/test/data/enm/study-XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-f40c9a22-a2d2-410b-99d2-fec1b44bcf0a", - "owner": { - "substance": { - "uuid": "XLSX-3ff81e94-3d5d-3e58-a761-b0bd7c94de3b" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "106", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "106", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Vortexing", - "Exposure duration,h": 24, - "Serum concentration,%": 0 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 76.229 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 143.961 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.709 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json b/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json deleted file mode 100644 index 3bb4e42..0000000 --- a/test/data/enm/study-XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-f4aabeaa-a7f4-4dfe-ab3b-f554a313d175", - "owner": { - "substance": { - "uuid": "XLSX-3dac4f9c-8c47-3085-9781-e70583adb12f" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "167", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "167", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly 2 euhedral morphologies: aspect ratio of 1 (20–250 nm and 400 nm) and 2:7,5 (50-350 nm)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.68 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json b/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json deleted file mode 100644 index f47e11c..0000000 --- a/test/data/enm/study-XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-f4ba2094-beba-4eb3-9a75-1d0955c3af17", - "owner": { - "substance": { - "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "186", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "186", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "equi-axed and rounded, or slightly elongated" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.6 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json b/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json deleted file mode 100644 index 8a66be0..0000000 --- a/test/data/enm/study-XLSX-f5800c94-652b-419f-b812-9446748af04c.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-f5800c94-652b-419f-b812-9446748af04c", - "owner": { - "substance": { - "uuid": "XLSX-2acfa382-5109-3e49-9fd4-ef8d139be4b2" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "103", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ZETA_POTENTIAL_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1302", - "title": "4.29 Nanomaterial zeta potential" - }, - "endpoint": "103", - "guideline": [ - "Zeta Potential" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - 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] -} diff --git a/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json b/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json deleted file mode 100644 index eab22f8..0000000 --- a/test/data/enm/study-XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-f861ae7e-cfc8-4406-b8c1-2bab45c9be8f", - "owner": { - "substance": { - "uuid": "XLSX-190fb54d-9b65-3d58-b65e-b3aae9a1f182" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "154", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "154", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - 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"uuid": "XLSX-f9df1a98-6f38-473a-a70f-80dcdf8fa5be", - "owner": { - "substance": { - "uuid": "XLSX-7e2b0550-595b-3427-b6f3-b84211a5c402" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "019", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "ASPECT_RATIO_SHAPE_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_274", - "title": "4.27 Nanomaterial aspect ratio/shape" - }, - "endpoint": "019", - "guideline": [ - "Shape" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": "Mainly euhedral (some elongated or sub-spherical)" - }, - "effects": [ - { - "endpoint": "ASPECT RATIO", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 1.1 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json b/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json deleted file mode 100644 index 8e60348..0000000 --- a/test/data/enm/study-XLSX-fa433d53-df49-4420-854a-fd59b58d39c5.json +++ /dev/null @@ -1,696 +0,0 @@ -{ - "uuid": "XLSX-fa433d53-df49-4420-854a-fd59b58d39c5", - "owner": { - "substance": { - "uuid": "XLSX-ffd24485-3b05-3afe-b6ff-547800723f71" - }, - "company": { - "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db", - "name": "FP7 MARINA" - } - }, - "citation": { - "title": "http://dx.doi.org/10.1371/journal.pone.0127174", - "year": "2015", - "owner": "P32 - KI" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0002993_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0002993", - "title": "BAO_0002993 Cytotoxicity Assay" - }, - "endpoint": "", - "guideline": [ - "ELISA / TNF-α release in culture medium" - ] - }, - "parameters": { - "CHMO:0002774": "Y", - "CLO_0000031": "HMDM (primary cells)", - "CLO_0000031 EFO_0004443": "ATCC", - "Cell culture conditions - Serum": "FBS (Gibco/413105K) ", - "Cell culture conditions - Serum concentration in growth medium": 0.1, - "Cell culture conditions - Serum concentration in treatment medium": 0.1, - "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)", - "Dispersion agent": "water with 0,05% BSA", - "NPO_1952": "N", - "NPO_1961": "N", - "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ", - "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 " - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "TNF-α (ng/ml)", - 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"unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 10.924 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 75, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 11.36 - } - }, - { - "endpoint": "TNF-α (ng/ml)", - "conditions": { - "Concentration": { - "loQualifier": "=", - "loValue": 100, - "unit": "µg/ml" - }, - "Replicate": "Replicate 4", - "Time point": { - "loQualifier": "=", - "loValue": 24, - "unit": "h" - } - }, - "result": { - "unit": "ng/ml", - "loValue": 7.389 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json b/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json deleted file mode 100644 index c9a8046..0000000 --- a/test/data/enm/study-XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-fb1ee400-bfaa-4ac1-bd6f-801e8ead9842", - "owner": { - "substance": { - "uuid": "XLSX-673c8355-a823-3bf2-a319-0d8af43e4d90" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "148", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1709_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1709", - "title": "NPO_1709 LDH Release Assay" - }, - "endpoint": "148", - "guideline": [ - "LDH" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Bath", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 223.966 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 310.968 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.48 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json b/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json deleted file mode 100644 index a21852f..0000000 --- a/test/data/enm/study-XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-fd583dba-17af-4d5d-b33b-99bc223cacb0", - "owner": { - "substance": { - "uuid": "XLSX-9f84408a-4414-33c9-a0f2-53bd19cf2d65" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "155", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "155", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": null, - "loValue": 84 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json b/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json deleted file mode 100644 index 58ba7a9..0000000 --- a/test/data/enm/study-XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-fd6f9dd1-b20f-45bc-95e1-e9aa08913cd1", - "owner": { - "substance": { - "uuid": "XLSX-7677801c-4895-3ffd-807a-832c589341df" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "151", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "NPO_1911_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1911", - "title": "NPO_1911 MTT Assay" - }, - "endpoint": "151", - "guideline": [ - "MTT" - ] - }, - "parameters": { - "Cell line": "NIH/3T3", - "Dispersion protocol": "Bath", - "Exposure duration,h": 144, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 49.906 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 107.192 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.291 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json b/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json deleted file mode 100644 index 52b6eb3..0000000 --- a/test/data/enm/study-XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639.json +++ /dev/null @@ -1,53 +0,0 @@ -{ - "uuid": "XLSX-fdcbf34a-59a7-4533-beab-0a38696cd639", - "owner": { - "substance": { - "uuid": "XLSX-7394378e-b717-3418-a3f7-27db3cbbd8d0" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "035", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "SPECIFIC_SURFACE_AREA_SECTION", - "term": "http://purl.bioontology.org/ontology/npo#NPO_1235", - "title": "4.28 Nanomaterial specific surface area" - }, - "endpoint": "035", - "guideline": [ - "SPECIFIC SURFACE AREA" - ] - }, - "parameters": { - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "SPECIFIC_SURFACE_AREA", - "conditions": { - }, - "result": { - "unit": "(m2/g)", - "loValue": 140.46 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json b/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json deleted file mode 100644 index 0cecd13..0000000 --- a/test/data/enm/study-XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887.json +++ /dev/null @@ -1,63 +0,0 @@ -{ - "uuid": "XLSX-fe6bb3ce-f1ea-4e4f-a781-9c4b439e5887", - "owner": { - "substance": { - "uuid": "XLSX-5e44448d-216f-3b91-891a-a7e1de030a13" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "186", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "P-CHEM", - "category": { - "code": "PC_GRANULOMETRY_SECTION", - "term": "http://purl.obolibrary.org/obo/CHMO_0002119", - "title": "4.5 Particle size distribution (Granulometry)" - }, - "endpoint": "186", - "guideline": [ - "TEM" - ] - }, - "parameters": { - "Dispersion protocol": "Tip" - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "PRIMARY SIZE 1ST DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 14 - } - }, - { - "endpoint": "PRIMARY SIZE 2ND DIMENSION", - "conditions": { - }, - "result": { - "unit": "nm", - "loValue": 22 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json b/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json deleted file mode 100644 index e457e48..0000000 --- a/test/data/enm/study-XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-fe7ed13c-9071-4a3d-88b6-1b105fd5ca70", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "172", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "172", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "A549", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 16.938 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 25.747 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.352 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json b/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json deleted file mode 100644 index 58a8b44..0000000 --- a/test/data/enm/study-XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-fe85de6c-5b0e-4ea1-8eeb-72d706db95a8", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "174", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "174", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "NRK-52E", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 2.322 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 3.225 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.036 - } - } - ] -} diff --git a/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json b/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json deleted file mode 100644 index 0844963..0000000 --- a/test/data/enm/study-XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47.json +++ /dev/null @@ -1,75 +0,0 @@ -{ - "uuid": "XLSX-fff71a73-f25e-4783-8660-bdb3aa52cd47", - "owner": { - "substance": { - "uuid": "XLSX-4ceef1bf-5f19-34e7-9d3d-51d65be297d7" - }, - "company": { - "uuid": "XLSX-c4568d50-2e06-3173-95d2-01adb74e6632", - "name": "MODENA" - } - }, - "citation": { - "title": "176", - "year": "2015", - "owner": "MODENA" - }, - "protocol": { - "topcategory": "TOX", - "category": { - "code": "BAO_0003009_SECTION", - "term": "http://www.bioassayontology.org/bao#BAO_0003009", - "title": "BAO_0003009 Cell Viability Assay" - }, - "endpoint": "176", - "guideline": [ - "WST-1" - ] - }, - "parameters": { - "Cell line": "THP-1 macrophage", - "Dispersion protocol": "Tip", - "Exposure duration,h": 24, - "Serum concentration,%": 0.1 - }, - "reliability": { - "r_isRobustStudy": "false", - "r_isUsedforClassification": "false", - "r_isUsedforMSDS": "false", - "r_purposeFlag": null, - "r_studyResultType": "experimental result", - "r_value": null - }, - "interpretation": { - "result": null - }, - "effects": [ - { - "endpoint": "EC25", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 10.218 - } - }, - { - "endpoint": "EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 15.137 - } - }, - { - "endpoint": "SLOPE EC50", - "conditions": { - }, - "result": { - "unit": "ug/ml", - "loValue": 0.197 - } - } - ] -} diff --git a/test/model-nanoparticle.rb b/test/model-nanoparticle.rb index 7fb944e..8dc6830 100644 --- a/test/model-nanoparticle.rb +++ b/test/model-nanoparticle.rb @@ -5,10 +5,6 @@ class NanoparticleModelTest < MiniTest::Test def setup @training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - unless @training_dataset - Import::Enanomapper.import File.join(File.dirname(__FILE__),"data","enm") - @training_dataset = Dataset.where(name: "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - end @prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first end @@ -50,6 +46,7 @@ class NanoparticleModelTest < MiniTest::Test refute_empty model.independent_variables assert_equal "Algorithm::Caret.rf", model.algorithms[:prediction][:method] assert_equal "Algorithm::Similarity.tanimoto", model.algorithms[:similarity][:method] + assert_nil model.algorithms[:descriptors][:categories] nanoparticle = @training_dataset.nanoparticles[-34] assert_includes nanoparticle.dataset_ids, @training_dataset.id prediction = model.predict nanoparticle diff --git a/test/model-validation.rb b/test/model-validation.rb new file mode 100644 index 0000000..83986d6 --- /dev/null +++ b/test/model-validation.rb @@ -0,0 +1,19 @@ +require_relative "setup.rb" + +class ValidationModelTest < MiniTest::Test + + def test_validation_model + m = Model::Validation.from_csv_file "#{DATA_DIR}/hamster_carcinogenicity.csv" + [:endpoint,:species,:source].each do |p| + refute_empty m[p] + end + assert m.classification? + refute m.regression? + m.crossvalidations.each do |cv| + assert cv.accuracy > 0.74, "Crossvalidation accuracy (#{cv.accuracy}) should be larger than 0.75. This may happen due to an unfavorable training/test set split." + end + prediction = m.predict Compound.from_smiles("CCCC(NN)C") + assert_equal "true", prediction[:value] + m.delete + end +end diff --git a/test/nanomaterial-model-validation.rb b/test/nanomaterial-model-validation.rb new file mode 100644 index 0000000..b91c389 --- /dev/null +++ b/test/nanomaterial-model-validation.rb @@ -0,0 +1,55 @@ +require_relative "setup.rb" + +class NanomaterialValidationModelTest < MiniTest::Test + + def setup + @training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first + @prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first + end + + def test_default_nanomaterial_validation_model + validation_model = Model::NanoValidation.create + [:endpoint,:species,:source].each do |p| + refute_empty validation_model[p] + end + assert validation_model.regression? + refute validation_model.classification? + validation_model.crossvalidations.each do |cv| + refute_nil cv.r_squared + refute_nil cv.rmse + end + nanoparticle = @training_dataset.nanoparticles[-34] + assert_includes nanoparticle.dataset_ids, @training_dataset.id + prediction = validation_model.predict nanoparticle + refute_nil prediction[:value] + assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions." + validation_model.delete + end + + def test_nanomaterial_validation_model_parameters + algorithms = { + :descriptors => { + :method => "fingerprint", + :type => "MP2D", + }, + :similarity => { + :method => "Algorithm::Similarity.tanimoto", + :min => 0.1 + }, + :prediction => { :method => "OpenTox::Algorithm::Regression.weighted_average" }, + :feature_selection => nil + } + validation_model = Model::NanoValidation.create algorithms: algorithms + assert validation_model.regression? + refute validation_model.classification? + validation_model.crossvalidations.each do |cv| + refute_nil cv.r_squared + refute_nil cv.rmse + end + nanoparticle = @training_dataset.nanoparticles[-34] + assert_includes nanoparticle.dataset_ids, @training_dataset.id + prediction = validation_model.predict nanoparticle + refute_nil prediction[:value] + assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions." + end +end diff --git a/test/nanomaterial-prediction-models.rb b/test/nanomaterial-prediction-models.rb deleted file mode 100644 index f90a822..0000000 --- a/test/nanomaterial-prediction-models.rb +++ /dev/null @@ -1,59 +0,0 @@ -require_relative "setup.rb" - -class NanomaterialPredictionModelTest < MiniTest::Test - - def setup - @training_dataset = Dataset.where(:name => "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - unless @training_dataset - Import::Enanomapper.import File.join(File.dirname(__FILE__),"data","enm") - @training_dataset = Dataset.where(name: "Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles").first - end - @prediction_feature = @training_dataset.features.select{|f| f["name"] == 'log2(Net cell association)'}.first - end - - def test_default_nanomaterial_prediction_model - prediction_model = Model::NanoPrediction.create - [:endpoint,:species,:source].each do |p| - refute_empty prediction_model[p] - end - assert prediction_model.regression? - refute prediction_model.classification? - prediction_model.crossvalidations.each do |cv| - refute_nil cv.r_squared - refute_nil cv.rmse - end - nanoparticle = @training_dataset.nanoparticles[-34] - assert_includes nanoparticle.dataset_ids, @training_dataset.id - prediction = prediction_model.predict nanoparticle - refute_nil prediction[:value] - assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions." - prediction_model.delete - end - - def test_nanomaterial_prediction_model_parameters - algorithms = { - :descriptors => { - :method => "fingerprint", - :type => "MP2D", - }, - :similarity => { - :method => "Algorithm::Similarity.tanimoto", - :min => 0.1 - }, - :prediction => { :method => "OpenTox::Algorithm::Regression.weighted_average" }, - :feature_selection => nil - } - prediction_model = Model::NanoPrediction.create algorithms: algorithms - assert prediction_model.regression? - refute prediction_model.classification? - prediction_model.crossvalidations.each do |cv| - refute_nil cv.r_squared - refute_nil cv.rmse - end - nanoparticle = @training_dataset.nanoparticles[-34] - assert_includes nanoparticle.dataset_ids, @training_dataset.id - prediction = prediction_model.predict nanoparticle - refute_nil prediction[:value] - assert_includes prediction[:prediction_interval][0]..prediction[:prediction_interval][1], prediction[:measurements].median, "This assertion assures that measured values are within the prediction interval. It may fail in 5% of the predictions." - end -end diff --git a/test/prediction_models.rb b/test/prediction_models.rb deleted file mode 100644 index 49a2472..0000000 --- a/test/prediction_models.rb +++ /dev/null @@ -1,19 +0,0 @@ -require_relative "setup.rb" - -class PredictionModelTest < MiniTest::Test - - def test_prediction_model - pm = Model::Prediction.from_csv_file "#{DATA_DIR}/hamster_carcinogenicity.csv" - [:endpoint,:species,:source].each do |p| - refute_empty pm[p] - end - assert pm.classification? - refute pm.regression? - pm.crossvalidations.each do |cv| - assert cv.accuracy > 0.74, "Crossvalidation accuracy (#{cv.accuracy}) should be larger than 0.75. This may happen due to an unfavorable training/test set split." - end - prediction = pm.predict Compound.from_smiles("CCCC(NN)C") - assert_equal "true", prediction[:value] - pm.delete - end -end diff --git a/test/validation-nanoparticle.rb b/test/validation-nanoparticle.rb index 9351e1b..85392a1 100644 --- a/test/validation-nanoparticle.rb +++ b/test/validation-nanoparticle.rb @@ -11,7 +11,8 @@ class NanoparticleValidationTest < MiniTest::Test def test_validate_default_nanoparticle_model model = Model::Lazar.create training_dataset: @training_dataset, prediction_feature: @prediction_feature cv = CrossValidation.create model - #File.open("tmp.pdf","w+"){|f| f.puts cv.correlation_plot} + p cv.id + File.open("tmp.pdf","w+"){|f| f.puts cv.correlation_plot format:"pdf"} refute_nil cv.r_squared refute_nil cv.rmse end @@ -30,6 +31,8 @@ class NanoparticleValidationTest < MiniTest::Test model = Model::Lazar.create prediction_feature: @prediction_feature, training_dataset: @training_dataset, algorithms: algorithms assert_equal "Algorithm::Caret.pls", model.algorithms[:prediction][:method] cv = CrossValidation.create model + p cv.id + File.open("tmp2.pdf","w+"){|f| f.puts cv.correlation_plot format:"pdf"} refute_nil cv.r_squared refute_nil cv.rmse end -- cgit v1.2.3