From fbeb14b83a03a2ebff3ec2f0e52b57bb6954d454 Mon Sep 17 00:00:00 2001
From: Christoph Helma <helma@in-silico.ch>
Date: Fri, 25 Jun 2021 12:44:49 +0200
Subject: model validations and pa predictions added

---
 ext/lazar/extconf.rb | 32 --------------------------------
 1 file changed, 32 deletions(-)
 delete mode 100644 ext/lazar/extconf.rb

(limited to 'ext/lazar/extconf.rb')

diff --git a/ext/lazar/extconf.rb b/ext/lazar/extconf.rb
deleted file mode 100644
index aa031e5..0000000
--- a/ext/lazar/extconf.rb
+++ /dev/null
@@ -1,32 +0,0 @@
-require 'fileutils'
-require 'rbconfig'
-require 'mkmf'
-
-main_dir = File.expand_path(File.join(File.dirname(__FILE__),"..",".."))
-
-# check for required programs
-programs = ["R","Rscript","mongod","java","getconf","wget","unzip","xls2csv","xlsx2csv"]
-programs.each do |program|
-  abort "Please install #{program} on your system." unless find_executable program
-end
-
-abort "Please install the latest Rserve version on your system (the CRAN version is outdated). Execute 'install.packages('Rserve',,'http://www.rforge.net/')' in a R console running as root ('sudo R')."  unless `R CMD Rserve --version`.match(/^Rserve v1.8/)
-
-# install R packages
-r_dir = File.join main_dir, "R"
-FileUtils.mkdir_p r_dir
-#FileUtils.mkdir_p File.join(main_dir,"bin") # for Rserve binary
-rinstall = File.expand_path(File.join(File.dirname(__FILE__),"rinstall.R"))
-puts `Rscript --vanilla #{rinstall} #{r_dir}`
-
-r_libs = Dir[File.join(r_dir,"*")].collect{|l| l.sub(r_dir, '').sub('/','')}.sort
-["caret","doMC","foreach","ggplot2","gridExtra","iterators","pls"].each do |lib|
-  abort "Failed to install R package '#{lib}'." unless r_libs.include?(lib)
-end
-
-# create a fake Makefile
-File.open(File.join(File.dirname(__FILE__),"Makefile"),"w+") do |makefile|
-  makefile.puts "all:\n\ttrue\n\ninstall:\n\ttrue\n"
-end
-
-$makefile_created = true
-- 
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