From e778475c578f13f30af4437845716d7e781c2609 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Sat, 13 Feb 2016 13:15:29 +0100 Subject: improved handling of duplicates in validations --- lib/crossvalidation.rb | 3 --- 1 file changed, 3 deletions(-) (limited to 'lib/crossvalidation.rb') diff --git a/lib/crossvalidation.rb b/lib/crossvalidation.rb index 9789882..0c5f0be 100644 --- a/lib/crossvalidation.rb +++ b/lib/crossvalidation.rb @@ -176,7 +176,6 @@ module OpenTox mae = 0 weighted_mae = 0 confidence_sum = 0 - p predictions predictions.each do |pred| compound_id,activity,prediction,confidence = pred if activity and prediction @@ -195,8 +194,6 @@ module OpenTox y = predictions.collect{|p| p[2]} R.assign "measurement", x R.assign "prediction", y - p x - p y R.eval "r <- cor(-log(measurement),-log(prediction),use='complete')" r = R.eval("r").to_ruby -- cgit v1.2.3