From 1f789133d961c29d3babfaf69cdde3d675288537 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Sat, 24 Aug 2019 14:44:52 +0200 Subject: initial refactored version for mutagenicity paper --- models/mutagenicity/Makefile | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 models/mutagenicity/Makefile (limited to 'models/mutagenicity/Makefile') diff --git a/models/mutagenicity/Makefile b/models/mutagenicity/Makefile new file mode 100644 index 0000000..637004c --- /dev/null +++ b/models/mutagenicity/Makefile @@ -0,0 +1,20 @@ +LAZAR_BIN = ../../bin +METADATA = independent_variable_type dependent_variable_type dependent_variable_values similarity_thresholds + +crossvalidation: independent_variables + $(LAZAR_BIN)/classification_crossvalidation.rb . + +independent_variables: Mutagenicity-Salmonella_typhimurium.csv $(METADATA) + $(LAZAR_BIN)/fingerprint_independent_variables.rb $< + +independent_variable_type: + echo "binary" > $@ + +dependent_variable_type: + echo "binary" > $@ + +dependent_variable_values: + echo -e "non-mutagenic\nmutagenic" > $@ + +similarity_thresholds: + echo -e "0.2\n0.5" > $@ -- cgit v1.2.3