From 99c42f76b02f9084d0757eb0c52b4a55fa295a95 Mon Sep 17 00:00:00 2001
From: Christoph Helma <helma@in-silico.ch>
Date: Fri, 11 Nov 2016 17:19:13 +0100
Subject: p-chem regression and enm import fixed

---
 ...-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json | 696 ---------------------
 1 file changed, 696 deletions(-)
 delete mode 100644 test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json

(limited to 'test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json')

diff --git a/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json b/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json
deleted file mode 100644
index 8787e6a..0000000
--- a/test/data/enm/study-XLSX-301fd1d5-cd81-4641-917c-7628be4bf734.json
+++ /dev/null
@@ -1,696 +0,0 @@
-{
-  "uuid": "XLSX-301fd1d5-cd81-4641-917c-7628be4bf734",
-  "owner": {
-    "substance": {
-      "uuid": "XLSX-93b2da85-fc0c-315f-8d3b-77f1a7776fb4"
-    },
-    "company": {
-      "uuid": "XLSX-4bb81f08-059d-32ad-b5fd-71c6bcc6e0db",
-      "name": "FP7 MARINA"
-    }
-  },
-  "citation": {
-    "title": "http://dx.doi.org/10.1371/journal.pone.0127174",
-    "year": "2015",
-    "owner": "P32 - KI"
-  },
-  "protocol": {
-    "topcategory": "TOX",
-    "category": {
-      "code": "BAO_0002993_SECTION",
-      "term": "http://www.bioassayontology.org/bao#BAO_0002993",
-      "title": "BAO_0002993 Cytotoxicity Assay"
-    },
-    "endpoint": "",
-    "guideline": [
-      "ELISA / TNF-α release in culture medium"
-    ]
-  },
-  "parameters": {
-    "CHMO:0002774": "Y",
-    "CLO_0000031": "HMDM (primary cells)",
-    "CLO_0000031 EFO_0004443": "ATCC",
-    "Cell culture conditions - Serum": "FBS (Gibco/413105K) ",
-    "Cell culture conditions - Serum concentration in growth medium": 0.1,
-    "Cell culture conditions - Serum concentration in treatment medium": 0.1,
-    "Cell line/Type - Full name": "human monocyte-derived macrophages (HMDM)",
-    "Dispersion agent": "water with 0,05% BSA",
-    "NPO_1952": "N",
-    "NPO_1961": "N",
-    "NPO_1969 OBI_0000272": "NANOGENOTOX Dispersion protocol (http://www.nanogenotox.eu/files/PDF/web%20nanogenotox%20dispersion%20protocol.pdf) ",
-    "OBI_0001911 BAO_0000114": "RPMI (Sigma, RNBB2729 "
-  },
-  "reliability": {
-    "r_isRobustStudy": "false",
-    "r_isUsedforClassification": "false",
-    "r_isUsedforMSDS": "false",
-    "r_purposeFlag": null,
-    "r_studyResultType": "experimental result",
-    "r_value": null
-  },
-  "interpretation": {
-    "result": null
-  },
-  "effects": [
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 0,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 3.092
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 1,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 9.627
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 5,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 3.7
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 10,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 12.022
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 25,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 13.495
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 50,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 11.939
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 75,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 9.904
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 100,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 1",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 9.839
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 0,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 0.874
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 1,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 2.035
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 5,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 2.071
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 10,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 2.04
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 25,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 2.536
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 50,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 2.801
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 75,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 6.024
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 100,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 2",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 3.218
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 0,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 9.147
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 1,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 13.019
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 5,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 12.83
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 10,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 12.336
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 25,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 18.473
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 50,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 25.681
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 75,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 22.385
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 100,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 3",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 18.916
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 0,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 21.04
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 1,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 29.97
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 5,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 26.508
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 10,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 30.14
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 25,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 43.317
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 50,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 44.152
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 75,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 51.261
-      }
-    },
-    {
-      "endpoint": "TNF-α (ng/ml)",
-      "conditions": {
-        "Concentration": {
-          "loQualifier": "=",
-          "loValue": 100,
-          "unit": "µg/ml"
-        },
-        "Replicate": "Replicate 4",
-        "Time point": {
-          "loQualifier": "=",
-          "loValue": 24,
-          "unit": "h"
-        }
-      },
-      "result": {
-        "unit": "ng/ml",
-        "loValue": 63.261
-      }
-    }
-  ]
-}
-- 
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