From f8faf510b4574df1a00fa61a9f0a1681fc2f4857 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Tue, 25 Aug 2015 17:20:55 +0200 Subject: Experiments added --- test/lazar-regression.rb | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) (limited to 'test/lazar-regression.rb') diff --git a/test/lazar-regression.rb b/test/lazar-regression.rb index c36f521..4062cfd 100644 --- a/test/lazar-regression.rb +++ b/test/lazar-regression.rb @@ -12,11 +12,12 @@ class LazarRegressionTest < MiniTest::Test assert_equal 1, prediction[:neighbors].size end - def test_weighted_average_with_relevant_fingerprints + def test_local_linear_regression + skip training_dataset = Dataset.from_csv_file "#{DATA_DIR}/EPAFHM.medi.csv" model = Model::LazarRegression.create training_dataset - model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.weighted_average_with_relevant_fingerprints") - compound = Compound.from_smiles "CC(C)(C)CN" + model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.local_linear_regression") + compound = Compound.from_smiles "NC(=O)OCCC" prediction = model.predict compound p prediction #assert_equal 13.6, prediction[:value].round(1) -- cgit v1.2.3