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module OpenTox
module Ontology
module Echa
=begin
require 'sparql/client'
@sparql = SPARQL::Client.new("http://apps.ideaconsult.net:8080/ontology")
def self.qs(classname="Endpoints")
return "PREFIX ot:<http://www.opentox.org/api/1.1#>
PREFIX ota:<http://www.opentox.org/algorithms.owl#>
PREFIX owl:<http://www.w3.org/2002/07/owl#>
PREFIX dc:<http://purl.org/dc/elements/1.1/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf:<http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX otee:<http://www.opentox.org/echaEndpoints.owl#>
PREFIX toxcast:<http://www.opentox.org/toxcast.owl#>
select *
where {
?endpoint rdfs:subClassOf otee:#{classname}.
?endpoint dc:title ?title.
}"
end
def self.make_option_list(endpoint="Endpoints", level=1)
out = ""
results = @sparql.query(qs(endpoint)) rescue results = []
results.each do |result|
endpointname = result.Endpoints.to_s.split('#').last
title = result.bound?(:title) ? result.title : endpointname
out += "<option value='#{title}' id='#{endpointname}' class='level_#{level}'>#{title}</option>\n"
out += make_option_list(endpointname, level + 1)
end
return out
end
def self.get_endpoint_selectlist(include_blank=true)
out = "<select id='endpoint' name='endpoint'>\n"
out += "<option value='' id='please_select'>Please select</option>\n" if include_blank
out += make_option_list
out += "</select>\n"
return out
end
=end
def self.endpoints
RestClientWrapper.get("http://apps.ideaconsult.net:8080/ambit2/query/ndatasets_endpoint",:accept => "text/csv").collect { |line| line.split(',').first if line.match(/^http/) }.compact
end
def self.datasets(endpoint)
RestClientWrapper.get("http://apps.ideaconsult.net:8080/ambit2/dataset?feature_sameas=#{URI.encode endpoint}", :accept => "text/uri-list").split("\n")
end
end
end
end
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