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require 'rubygems'
require "bundler/setup"
require 'rdf'
require 'rdf/raptor'
require 'rdf/n3'
require "rest-client"
require 'uri'
require 'yaml'
require 'json'
require 'logger'
require "securerandom"
# define constants and global variables
#TODO: switch services to 1.2
RDF::OT = RDF::Vocabulary.new 'http://www.opentox.org/api/1.2#'
RDF::OT1 = RDF::Vocabulary.new 'http://www.opentox.org/api/1.1#'
RDF::OTA = RDF::Vocabulary.new 'http://www.opentox.org/algorithmTypes.owl#'
RDF::OLO = RDF::Vocabulary.new 'http://purl.org/ontology/olo/core#'
CLASSES = ["Generic", "Compound", "Feature", "Dataset", "Algorithm", "Model", "Validation", "Task", "Investigation"]
RDF_FORMATS = [:rdfxml,:ntriples,:turtle]
# Regular expressions for parsing classification data
TRUE_REGEXP = /^(true|active|1|1.0|tox|activating|carcinogen|mutagenic)$/i
FALSE_REGEXP = /^(false|inactive|0|0.0|low tox|deactivating|non-carcinogen|non-mutagenic)$/i
[
"overwrite.rb",
"error.rb",
"rest-client-wrapper.rb",
"authorization.rb",
"policy.rb",
"otlogger.rb",
"opentox.rb",
"task.rb",
"compound.rb",
"dataset.rb",
"model.rb",
].each{ |f| require File.join(File.dirname(__FILE__),f) }
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