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require_relative "setup.rb"
class DownloadTest < MiniTest::Test
def test_pubchem_classification
Download.pubchem_classification aid: 1191, active: "carcinogen", inactive: "non-carcinogen", species: "Hamster", endpoint: "Carcinogen"
csv = File.join(File.dirname(__FILE__),"..","data","Carcinogen-Hamster.csv")
meta_file = File.join(File.dirname(__FILE__),"..","data","Carcinogen-Hamster.json")
assert File.exists?(csv)
table = CSV.read csv
assert_equal 87, table.size
assert_equal ["48413129", "CC=O", "carcinogen"], table[1]
meta = JSON.parse(File.read(meta_file))
assert_equal "Hamster", meta["species"]
assert_equal 1, meta["warnings"].size
FileUtils.rm(csv)
FileUtils.rm(meta_file)
end
def test_import_daphnia
Download.daphnia
table = CSV.read File.join(Download::DATA,"Acute_toxicity-Daphnia_magna.csv")
assert_equal "BrC(Br)Br", table[1][1]
assert_equal 0.74, table[1][2].to_f.round(2)
assert_equal "-log[LC50_mmol/L]", table[0][2]
end
end
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