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authorChristoph Helma <helma@in-silico.ch>2010-09-14 20:52:04 +0200
committerChristoph Helma <helma@in-silico.ch>2010-09-14 20:52:04 +0200
commit5334912982dd06f61103025504a6f78438847ee0 (patch)
tree20e14847f5ed7f0690afa8a7d3991b007ee77222
parentdc7c3474ce544f2f3fa3c23a483f6c24339999de (diff)
simplified version of OwlSerializer, RDF/XML for algorithm/lazar, RDF/XML for annotations,compounds, features in dataset
-rw-r--r--lazar.rb16
1 files changed, 9 insertions, 7 deletions
diff --git a/lazar.rb b/lazar.rb
index 560a513..87387df 100644
--- a/lazar.rb
+++ b/lazar.rb
@@ -216,14 +216,16 @@ class Lazar < Model
activity_dataset = YAML.load(RestClient.get(data.trainingDataset, :accept => 'application/x-yaml').to_s)
feature_dataset = YAML.load(RestClient.get(data.feature_dataset_uri, :accept => 'application/x-yaml').to_s)
owl = OpenTox::OwlSerializer.create 'Model', uri
- owl.annotate("creator","http://github.com/helma/opentox-model")
+ #owl.creator "helma@in-silico.ch"
+ #owl.contributor "helma@in-silico.ch"
+ owl.annotate("creator",data.algorithm,XSD.AnyUri)
owl.annotate("title", URI.decode(data.dependentVariables.split(/#/).last) )
- owl.annotate("date",created_at.to_s)
- owl.annotate("algorithm",data.algorithm)
- owl.annotate("dependentVariables",activity_dataset.features.join(', '))
- owl.annotate("independentVariables",feature_dataset.features.join(', '))
- owl.annotate("predictedVariables", data.dependentVariables )
- owl.annotate("trainingDataset",data.trainingDataset)
+ owl.annotate("date",created_at.to_s,XSD.DateTime)
+ #owl.annotate("algorithm",data.algorithm)
+ #owl.annotate("dependentVariables",activity_dataset.features.join(', '))
+ #owl.annotate("independentVariables",feature_dataset.features.join(', '))
+ #owl.annotate("predictedVariables", data.dependentVariables )
+ #owl.annotate("trainingDataset",data.trainingDataset)
=begin
owl.parameters = {
"Dataset URI" =>