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authorChristoph Helma <helma@in-silico.ch>2010-08-09 10:01:32 +0200
committerChristoph Helma <helma@in-silico.ch>2010-08-09 10:01:32 +0200
commitfd8e09cee5b8746c4cb8b15a7b9cafb0f634be93 (patch)
treee45f0e40b23177e00826c833958d2eab84a887a0
parent8e74fbbe98b4ef13c3d7a52352ab0e5ec99b7675 (diff)
some obsolete parts removed
-rw-r--r--lazar.rb4
1 files changed, 0 insertions, 4 deletions
diff --git a/lazar.rb b/lazar.rb
index 20e1dbf..f79b901 100644
--- a/lazar.rb
+++ b/lazar.rb
@@ -37,9 +37,6 @@ class Lazar < Model
sim = OpenTox::Algorithm::Similarity.weighted_tanimoto(compound_matches,matches,lazar.p_values)
lazar.activities[uri].each do |act|
if sim > 0.3
- #similarities[uri] = sim
- #activities[uri] = [] unless activities[uri]
- #activities[uri] << act
neighbors[uri] = {:similarity => sim}
neighbors[uri][:features] = { :activating => [], :deactivating => [] } unless neighbors[uri][:features]
matches.each do |m|
@@ -221,7 +218,6 @@ class Lazar < Model
feature_dataset = YAML.load(RestClient.get(data.feature_dataset_uri, :accept => 'application/x-yaml').to_s)
owl = OpenTox::Owl.create 'Model', uri
owl.set("creator","http://github.com/helma/opentox-model")
- # TODO
owl.set("title", URI.decode(data.dependentVariables.split(/#/).last) )
#owl.set("title","#{URI.decode(activity_dataset.title)} lazar classification")
owl.set("date",created_at.to_s)