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#!/usr/bin/env ruby
require_relative '../../lazar/lib/lazar'
include OpenTox
results = JSON.parse File.read(ARGV[0])
puts "SMILES,#{File.basename(ARGV[0],".json").sub("pa_","").capitalize},Probability(0),Probability(1),Nr Neighbors,Warnings"
results.each do |id,r|
s = Compound.find(id).smiles
if r["value"]
puts [
s,
r["value"],
r["probabilities"]["0"],
r["probabilities"]["1"],
r["neighbors"].size,
r["warnings"],
].join(",")
else
r["neighbors"] ? n = r["neighbors"].size : n = nil
puts [
s,
r["value"],
nil,
nil,
n,
r["warnings"],
].join(",")
end
end
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