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authorChristoph Helma <helma@in-silico.ch>2016-01-29 12:23:14 +0100
committerChristoph Helma <helma@in-silico.ch>2016-01-29 12:23:14 +0100
commit7e824ae1a52ee27bda90dd08783aef0ab3a539a9 (patch)
tree10d0a9bc2f271b82a6ca2580c9cfd1014973e3d6 /test/predict.rb
parentfbc7ec1f342767052e23d6430ea94f0ae7c8d27f (diff)
internal calculation of difference featuresprediction
Diffstat (limited to 'test/predict.rb')
-rw-r--r--test/predict.rb14
1 files changed, 8 insertions, 6 deletions
diff --git a/test/predict.rb b/test/predict.rb
index 9aed5e2..c72de02 100644
--- a/test/predict.rb
+++ b/test/predict.rb
@@ -1,9 +1,11 @@
require_relative "../nanoparticles.rb"
data = JSON.parse(File.read("./data.json"))
-relevant_features = JSON.parse(File.read("./relevant-features.json"))
-example = data[data.keys.sample]["physchem"].select{|f,v| relevant_features.keys.include? f}
-#data.collect
-puts predict(example)[:match].collect{|id,v| v["tox"]}.first
-puts predict(example)[:prediction]
-#puts predict(example)[:neighbors].size
+query_features = JSON.parse(File.read("./query-features.json"))
+key = data.keys.sample
+p key
+example = data[key]["physchem"].select{|f,v| query_features.include? f}
+prediction = predict(example)
+puts prediction[:match].collect{|id,v| v["tox"]}.first
+puts prediction[:prediction]
+puts prediction[:neighbors].size