From 350b379332a6ee4e5eb55504a7b121c1268ebf21 Mon Sep 17 00:00:00 2001
From: gebele <gebele@in-silico.ch>
Date: Mon, 31 Oct 2016 15:18:51 +0000
Subject: removed obsolete code

---
 views/predict.haml    |  7 -------
 views/prediction.haml | 16 ----------------
 2 files changed, 23 deletions(-)

(limited to 'views')

diff --git a/views/predict.haml b/views/predict.haml
index 0630b2c..5d5d6f0 100644
--- a/views/predict.haml
+++ b/views/predict.haml
@@ -51,7 +51,6 @@
           Neighbor algorithm parameter:
           = "min sim = #{m.model.neighbor_algorithm_parameters["min_sim"]}"
           %p
-          -#- cv = OpenTox::CrossValidation.find(m.repeated_crossvalidation_id)
           %b Independent crossvalidations (log2 transformed):
           - crossvalidations =[]
           - m.repeated_crossvalidation.crossvalidation_ids.each{|cv| c = OpenTox::Validation::CrossValidation.find(cv); crossvalidations << c}
@@ -91,7 +90,6 @@
               %input{:id=>"example_core",:type=>"hidden",:name=>"example_core",:value=>"#{example.core}"}
               %input{:id=>"example_coating",:type=>"hidden",:name=>"example_coating",:value=>"#{example.coating}"}
               %input{:id=>"example_pc",:type=>"hidden",:name=>"example_pc",:value=>"#{example.physchem_descriptors}"}
-              -#- size = example.physchem_descriptors.size
               - size = relevant_features.size
               %input{:id=>"size",:type=>"hidden",:name=>"size",:value=>size}
               %input{:id=>"id",:type=>"hidden",:name=>"example_id",:value=>example.id}
@@ -110,13 +108,8 @@
               // prediction model id 
               %input{:id=>"prediction_model",:type=>"hidden",:name=>"prediction_model",:value=>m.id}
             - relevant_features.sort_by{|d| d.category}.each_with_index do |relf,id|
-              -#- example.physchem_descriptors.sort_by{|d| OpenTox::Feature.find(d[0]).category}.each_with_index do |v,id|
               - feature = relf
-              /%p= feature.id
               - v = example.physchem_descriptors.find{|id,v| id == feature.id.to_s  }
-              /%p= v
-              -#- feature = OpenTox::Feature.find_by(:id => v[0])
-              -#- feature = v
               - name = feature.name
               - if feature[:conditions] && !feature[:conditions]["MEDIUM"].blank?
                 - name = feature.name + " / " + feature[:conditions]["MEDIUM"]
diff --git a/views/prediction.haml b/views/prediction.haml
index e6b4ae4..53a9cfd 100644
--- a/views/prediction.haml
+++ b/views/prediction.haml
@@ -43,7 +43,6 @@
             Net cell association
             %br
             [mL/ug(Mg)]
-          -#- @input.sort_by{|d| OpenTox::Feature.find(d[0]).category}.each do |key|
           - @input.each{|d| OpenTox::Feature.find(d[0]).category}.each do |key|
             - feature = OpenTox::Feature.find_by(:id=>key[0])
             - name = feature.name
@@ -95,16 +94,6 @@
               %h5.th5 Prediction:
               = "not available"
               %br
-            -#- if @prediction[:rmse]
-              %h5.th5
-                %a{:href=>"https://en.wikipedia.org/wiki/Root-mean-square_deviation", :rel=>"external"} RMSE:
-              = @prediction[:rmse].round(3)
-              %br
-            -#- if @prediction[:r_squared]
-              %h5.th5
-                %a{:href=>"https://en.wikipedia.org/wiki/Coefficient_of_determination", :rel=>"external"}= "R"+"<sup>2</sup>"+":"
-              = @prediction[:r_squared].round(3)
-              %br
             - if @prediction[:prediction_interval]
               %h5
                 %a{:href=>"https://en.wikipedia.org/wiki/Prediction_interval", :rel=>"external"} 95% Prediction interval:
@@ -118,7 +107,6 @@
             - if !@prediction[:value] && !@prediction[:measurements]
               %h5.th5 not available
           / physchem
-          -#- @input.sort_by{|d| OpenTox::Feature.find(d[0]).category}.each do |v|
           - @input.each do |v|
             %td.physchem
               %div{:style=>"display:inline-block;padding-right:20px;"}
@@ -131,7 +119,6 @@
         - if @prediction[:neighbors]
           - @prediction[:neighbors].each_with_index do |neighbor,idx|
             - nano = OpenTox::Nanoparticle.find(neighbor["_id"])
-            -#- nano.physchem_descriptors.delete_if{|id,v| OpenTox::Feature.find(id).category != "P-CHEM"} if @type == "pc"
             %tr
               / ID
               %td
@@ -152,9 +139,6 @@
                 %h5.th5 Measurement:
                 = neighbor["measurements"][0]
               / Physchem
-              -#- nano.physchem_descriptors.delete_if{|id,v| @type == "pc" ? !@pc_relevant_features.include?(OpenTox::Feature.find(id)) : !@pcp_relevant_features.include?(OpenTox::Feature.find(id))}.sort_by{|id,v| OpenTox::Feature.find(id).category}.each do |k,v|
               - nano.physchem_descriptors.delete_if{|id,v| @type == "pc" ? !@pc_relevant_features.include?(OpenTox::Feature.find(id)) : !@pcp_relevant_features.include?(OpenTox::Feature.find(id))}.sort_by{|id,v| @pc_relevant_features.index OpenTox::Feature.find(id)}.each do |k,v|
                 %td.physchem
-                  -#%div
-                    %div{:style=>"display:inline-block;padding-right:20px;"}
                   = v[0].round(3) unless v.nil?
-- 
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