From d6811507c1c1339cc4fe7cdb429b9b34b97dc422 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Fri, 22 Oct 2010 17:45:19 +0200 Subject: new API with support for external services (initial version) --- Rakefile | 2 ++ 1 file changed, 2 insertions(+) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 3846bd1..8dd1088 100644 --- a/Rakefile +++ b/Rakefile @@ -27,6 +27,8 @@ begin "google-spreadsheet-ruby", "tmail", "rinruby", + "rdf", + "rdf-raptor", "rjb" ].each { |dep| gem.add_dependency dep } [ "dm-core", -- cgit v1.2.3 From b93002b4ea50ff7e357da08abd10577347ce2d5f Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Thu, 11 Nov 2010 09:31:27 +0100 Subject: first steps towards version 2.0, yard documentation started, passes compound, dataset, feature, algorithm, fminer tests --- Rakefile | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 8dd1088..18f24bd 100644 --- a/Rakefile +++ b/Rakefile @@ -21,14 +21,14 @@ begin "rack-flash", "nokogiri", "rubyzip", - "builder", + #"builder", "roo", "spreadsheet", "google-spreadsheet-ruby", "tmail", "rinruby", - "rdf", - "rdf-raptor", + #"rdf", + #"rdf-raptor", "rjb" ].each { |dep| gem.add_dependency dep } [ "dm-core", @@ -42,7 +42,7 @@ begin gem.add_dependency "haml", ">=3" ['cucumber','jeweler'].each { |dep| gem.add_development_dependency dep } gem.files = FileList["[A-Z]*", "{bin,generators,lib,test}/**/*", 'lib/jeweler/templates/.gitignore'] - gem.files.include %w(lib/tasks/owl.rb, lib/environment.rb, lib/algorithm.rb, lib/compound.rb, lib/dataset.rb, lib/model.rb, lib/utils.rb, lib/validation.rb, lib/templates/*) + gem.files.include %w(lib/tasks/owl.rb, lib/environment.rb, lib/algorithm.rb, lib/compound.rb, lib/dataset.rb, lib/model.rb, lib/validation.rb, lib/templates/*) # gem is a Gem::Specification... see http://www.rubygems.org/read/chapter/20 for additional settings end Jeweler::GemcutterTasks.new -- cgit v1.2.3 From f8552611c2dbe25d76474f51e4e895bf9c2b5c5e Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Fri, 19 Nov 2010 16:53:21 +0100 Subject: lazar predictions for toxcreate working --- Rakefile | 3 --- 1 file changed, 3 deletions(-) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 18f24bd..6838e75 100644 --- a/Rakefile +++ b/Rakefile @@ -21,14 +21,11 @@ begin "rack-flash", "nokogiri", "rubyzip", - #"builder", "roo", "spreadsheet", "google-spreadsheet-ruby", "tmail", "rinruby", - #"rdf", - #"rdf-raptor", "rjb" ].each { |dep| gem.add_dependency dep } [ "dm-core", -- cgit v1.2.3 From 7067bd44d5c97618ec6a968bbdfe6d6bda12a1cd Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Wed, 24 Nov 2010 13:13:40 +0100 Subject: opentox-ruby-api-wrapper renamed to opentox-ruby --- Rakefile | 64 ++++++++++++++++++++++++++++++++-------------------------------- 1 file changed, 32 insertions(+), 32 deletions(-) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 6838e75..53c6ae9 100644 --- a/Rakefile +++ b/Rakefile @@ -4,45 +4,45 @@ require 'rake' begin require 'jeweler' Jeweler::Tasks.new do |gem| - gem.name = "opentox-ruby-api-wrapper" + gem.name = "opentox-ruby" gem.summary = %Q{Ruby wrapper for the OpenTox REST API} gem.description = %Q{Ruby wrapper for the OpenTox REST API (http://www.opentox.org)} gem.email = "helma@in-silico.ch" gem.homepage = "http://github.com/helma/opentox-ruby-api-wrapper" - gem.authors = ["Christoph Helma, Martin Guetlein"] - # dependencies - [ "sinatra", - "emk-sinatra-url-for", - "sinatra-respond_to", - "sinatra-static-assets", - "rest-client", - "rack", - "rack-contrib", - "rack-flash", - "nokogiri", - "rubyzip", - "roo", - "spreadsheet", - "google-spreadsheet-ruby", - "tmail", - "rinruby", - "rjb" - ].each { |dep| gem.add_dependency dep } - [ "dm-core", - 'dm-serializer', - 'dm-timestamps', - 'dm-types', - 'dm-migrations', - "dm-mysql-adapter", + gem.authors = ["Christoph Helma, Martin Guetlein, Andreas Maunz, Micha Rautenberg, David Vorgrimmler"] + # dependencies + [ "sinatra", + "emk-sinatra-url-for", + "sinatra-respond_to", + "sinatra-static-assets", + "rest-client", + "rack", + "rack-contrib", + "rack-flash", + "nokogiri", + "rubyzip", + "roo", + "spreadsheet", + "google-spreadsheet-ruby", + "tmail", + "rinruby", + "rjb" + ].each { |dep| gem.add_dependency dep } + [ "dm-core", + 'dm-serializer', + 'dm-timestamps', + 'dm-types', + 'dm-migrations', + "dm-mysql-adapter", "dm-validations", - ].each {|dep| gem.add_dependency dep, ">= 1" } - gem.add_dependency "haml", ">=3" - ['cucumber','jeweler'].each { |dep| gem.add_development_dependency dep } - gem.files = FileList["[A-Z]*", "{bin,generators,lib,test}/**/*", 'lib/jeweler/templates/.gitignore'] - gem.files.include %w(lib/tasks/owl.rb, lib/environment.rb, lib/algorithm.rb, lib/compound.rb, lib/dataset.rb, lib/model.rb, lib/validation.rb, lib/templates/*) + ].each {|dep| gem.add_dependency dep, ">= 1" } + gem.add_dependency "haml", ">=3" + ['jeweler'].each { |dep| gem.add_development_dependency dep } + gem.files = FileList["[A-Z]*", "{bin,generators,lib,test}/**/*", 'lib/jeweler/templates/.gitignore'] + #gem.files.include %w(lib/environment.rb, lib/algorithm.rb, lib/compound.rb, lib/dataset.rb, lib/model.rb, lib/validation.rb, lib/templates/*) # gem is a Gem::Specification... see http://www.rubygems.org/read/chapter/20 for additional settings end - Jeweler::GemcutterTasks.new + Jeweler::GemcutterTasks.new rescue LoadError puts "Jeweler (or a dependency) not available. Install it with: sudo gem install jeweler" end -- cgit v1.2.3 From 8ff5d7de9683d9bbe6103dd42d10aefbf2f4a021 Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Wed, 24 Nov 2010 14:43:20 +0100 Subject: opentox-ruby gem in config.ru --- Rakefile | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 53c6ae9..2578bb4 100644 --- a/Rakefile +++ b/Rakefile @@ -8,7 +8,7 @@ begin gem.summary = %Q{Ruby wrapper for the OpenTox REST API} gem.description = %Q{Ruby wrapper for the OpenTox REST API (http://www.opentox.org)} gem.email = "helma@in-silico.ch" - gem.homepage = "http://github.com/helma/opentox-ruby-api-wrapper" + gem.homepage = "http://github.com/helma/opentox-ruby" gem.authors = ["Christoph Helma, Martin Guetlein, Andreas Maunz, Micha Rautenberg, David Vorgrimmler"] # dependencies [ "sinatra", @@ -24,6 +24,7 @@ begin "roo", "spreadsheet", "google-spreadsheet-ruby", + "yajl-ruby", "tmail", "rinruby", "rjb" @@ -80,7 +81,7 @@ Rake::RDocTask.new do |rdoc| end rdoc.rdoc_dir = 'rdoc' - rdoc.title = "opentox-ruby-api-wrapper #{version}" + rdoc.title = "opentox-ruby #{version}" rdoc.rdoc_files.include('README*') rdoc.rdoc_files.include('lib/**/*.rb') end -- cgit v1.2.3 From d3dfccb8e46e1d5677877b833fa81acad4d026d4 Mon Sep 17 00:00:00 2001 From: root Date: Fri, 25 Feb 2011 17:54:39 +0000 Subject: ohm/redis backend --- Rakefile | 1 + 1 file changed, 1 insertion(+) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index 2578bb4..e49efc3 100644 --- a/Rakefile +++ b/Rakefile @@ -27,6 +27,7 @@ begin "yajl-ruby", "tmail", "rinruby", + "ohm", "rjb" ].each { |dep| gem.add_dependency dep } [ "dm-core", -- cgit v1.2.3 From 9f91e5438a32f0b3b5b3755adfa20d4e0d36566b Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Sun, 27 Feb 2011 09:32:57 +0100 Subject: code cleanup --- Rakefile | 2 ++ 1 file changed, 2 insertions(+) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index e49efc3..eb0b23a 100644 --- a/Rakefile +++ b/Rakefile @@ -30,6 +30,7 @@ begin "ohm", "rjb" ].each { |dep| gem.add_dependency dep } +=begin [ "dm-core", 'dm-serializer', 'dm-timestamps', @@ -38,6 +39,7 @@ begin "dm-mysql-adapter", "dm-validations", ].each {|dep| gem.add_dependency dep, ">= 1" } +=end gem.add_dependency "haml", ">=3" ['jeweler'].each { |dep| gem.add_development_dependency dep } gem.files = FileList["[A-Z]*", "{bin,generators,lib,test}/**/*", 'lib/jeweler/templates/.gitignore'] -- cgit v1.2.3 From 2b0ad7c00ec9559d05e07e78cee5f7846d51ee5f Mon Sep 17 00:00:00 2001 From: Christoph Helma Date: Thu, 3 Mar 2011 11:35:54 +0100 Subject: login methods in to-html.rb removed, interferes with ToxCreate login --- Rakefile | 1 + 1 file changed, 1 insertion(+) (limited to 'Rakefile') diff --git a/Rakefile b/Rakefile index eb0b23a..b496cc2 100644 --- a/Rakefile +++ b/Rakefile @@ -28,6 +28,7 @@ begin "tmail", "rinruby", "ohm", + "SystemTimer", "rjb" ].each { |dep| gem.add_dependency dep } =begin -- cgit v1.2.3