From 6a2c3f2100d030c30b7d8ac8c95dcece7edb040c Mon Sep 17 00:00:00 2001
From: Christoph Helma <helma@in-silico.de>
Date: Tue, 8 Sep 2009 16:04:23 +0200
Subject: api separated into individual components, adapted for new webservice
 versions

---
 lib/algorithm.rb | 35 +++++++++++++++++++++++++++++++++++
 1 file changed, 35 insertions(+)
 create mode 100644 lib/algorithm.rb

(limited to 'lib/algorithm.rb')

diff --git a/lib/algorithm.rb b/lib/algorithm.rb
new file mode 100644
index 0000000..912e14d
--- /dev/null
+++ b/lib/algorithm.rb
@@ -0,0 +1,35 @@
+module OpenTox
+	module Algorithm 
+
+		class Fminer < OpenTox
+			# Create a new dataset with BBRC features
+			def initialize(training_dataset)
+				@uri = RestClient.post @@config[:services]["opentox-fminer"], :dataset_uri => training_dataset.uri
+			end
+		end
+
+		class Similarity < OpenTox
+
+			def initialize
+				@uri = @@config[:services]["opentox-similarity"]
+			end
+
+			def self.tanimoto(dataset,compounds)
+				RestClient.post @uri + 'tanimoto', :dataset_uri => dataset.uri, :compound_uris => compounds.collect{ |c| c.uri }
+			end
+
+			def self.weighted_tanimoto(dataset,compounds)
+				RestClient.post @uri + 'weighted_tanimoto', :dataset_uri => dataset.uri, :compound_uris => compounds.collect{ |c| c.uri }
+			end
+
+		end
+
+		class Lazar < OpenTox
+			# Create a new prediction model from a dataset
+			def initialize(params)
+				@uri = RestClient.post @@config[:services]["opentox-lazar"] + 'models' , :dataset_uri => params[:dataset_uri]
+			end
+		end
+
+	end
+end
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