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authorDavid Vorgrimmler <vorgrimmlerdavid@gmx.de>2012-03-09 15:24:59 +0100
committerDavid Vorgrimmler <vorgrimmlerdavid@gmx.de>2012-03-09 15:24:59 +0100
commitd0ee7e993f851407263962e0d8d3b9c3a2a76de6 (patch)
tree04c939c6fdaa65ce323afe5e1723cf527820f452
parent9245dbb13a6add795b66053bc4d2a0485dee496b (diff)
Workaround for small datasets.
-rw-r--r--lib/utils.rb8
1 files changed, 6 insertions, 2 deletions
diff --git a/lib/utils.rb b/lib/utils.rb
index c9dd32a..d96c2b3 100644
--- a/lib/utils.rb
+++ b/lib/utils.rb
@@ -55,12 +55,16 @@ module OpenTox
master = jl_master if jl_master
master = ambit_master if ambit_master
end
-
+
parser = OpenTox::Parser::Spreadsheets.new
ds = OpenTox::Dataset.new
ds.save
parser.dataset = ds
- ds = parser.load_csv(master.collect{|r| r.join(",")}.join("\n"),false,false,true)
+ if compounds.size == 1
+ ds = parser.load_csv(master.collect{|r| r.join(",")}.join("\n"),false,true,false) # all_numeric = true, all features should be treated as numeric
+ else
+ ds = parser.load_csv(master.collect{|r| r.join(",")}.join("\n"),false,false,true) # del_nominal = true, which removes nominal features
+ end
ds.save
rescue Exception => e