module OpenTox module Backend class FourStore #TODO: catch 4store errors @@mime_format = { "application/rdf+xml" => :rdfxml, "text/turtle" => :turtle, "text/plain" => :ntriples, "text/uri-list" => :uri_list, #"application/json" => :json, #"application/x-yaml" => :yaml, #"text/x-yaml" => :yaml, #"text/yaml" => :yaml, "text/html" => :html, # TODO: compression, forms #/sparql/ => :sparql #removed to prevent sparql injections } @@format_mime = { :rdfxml => "application/rdf+xml", :turtle => "text/turtle", :ntriples => "text/plain", :uri_list => "text/uri-list", #:json => "application/json", #:yaml => "text/yaml", :html => "text/html", } @@accept_formats = [:rdfxml, :turtle, :ntriples, :uri_list, :html] #, :json, :yaml] @@content_type_formats = [:rdfxml, :turtle, :ntriples]#, :json, :yaml] @@rdf_formats = [:rdfxml, :turtle, :ntriples] def self.list mime_type mime_type = "text/html" if mime_type.match(%r{\*/\*}) bad_request_error "'#{mime_type}' is not a supported mime type. Please specify one of #{@@accept_formats.collect{|f| @@format_mime[f]}.join(", ")} in the Accept Header." unless @@accept_formats.include? @@mime_format[mime_type] if mime_type =~ /json|yaml|uri-list/ sparql = "SELECT ?s WHERE {?s <#{RDF.type}> <#{@@class}>. }" elsif mime_type =~ /turtle|html|rdf|plain/ sparql = "CONSTRUCT {?s ?p ?o.} WHERE {?s <#{RDF.type}> <#{@@class}>; ?p ?o. }" end query sparql, mime_type end def self.get uri, mime_type mime_type = "text/html" if mime_type.match(%r{\*/\*}) bad_request_error "'#{mime_type}' is not a supported mime type. Please specify one of #{@@accept_formats.collect{|f| @@format_mime[f]}.join(", ")} in the Accept Header." unless @@accept_formats.include? @@mime_format[mime_type] not_found_error "#{uri} not found." unless list("text/uri-list").split("\n").include?(uri) sparql = "CONSTRUCT {?s ?p ?o.} FROM <#{uri}> WHERE { ?s ?p ?o. }" query sparql, mime_type end def self.post uri, rdf, mime_type bad_request_error "'#{mime_type}' is not a supported content type. Please use one of #{@@content_type_formats.collect{|f| @@format_mime[f]}.join(", ")}." unless @@content_type_formats.include? @@mime_format[mime_type] rdf = convert rdf, @@mime_format[mime_type], :ntriples#, uri unless mime_type == 'text/plain' RestClient.post File.join(four_store_uri,"data")+"/", :data => rdf, :graph => uri, "mime-type" => "application/x-turtle" # not very consistent in 4store end def self.put uri, rdf, mime_type, skip_rewrite=false bad_request_error "'#{mime_type}' is not a supported content type. Please use one of #{@@content_type_formats.collect{|f| @@format_mime[f]}.join(", ")}." unless @@content_type_formats.include? @@mime_format[mime_type] uuid = uri.sub(/\/$/,'').split('/').last bad_request_error "'#{uri}' is not a valid URI." unless uuid =~ /[a-f0-9]{8}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{4}-[a-f0-9]{12}/ if !skip_rewrite rdf = convert rdf, @@mime_format[mime_type], :ntriples, uri elsif mime_type != "text/plain" # ntriples are not converted rdf = convert rdf, @@mime_format[mime_type], :ntriples end rdf = "<#{uri}> <#{RDF.type}> <#{@@class}>." unless rdf # create empty resource RestClient.put File.join(four_store_uri,"data",uri), rdf, :content_type => "application/x-turtle" # content-type not very consistent in 4store end def self.delete uri RestClientWrapper.delete data_uri uri end def self.query sparql, mime_type if sparql =~ /SELECT/i xml = RestClient.post File.join(four_store_uri,"sparql")+"/", :query => sparql #TODO request tab delimited format to speed up parsing list = parse_sparql_xml_results(xml).collect{|hash| hash["s"]} case mime_type when /json/ return list.to_json when /yaml/ return list.to_yaml when /uri-list/ return list.join "\n" else bad_request_error "#{mime_type} is not a supported mime type for SELECT statements. Please use one of text/uri-list, application/json, text/yaml, text/html." end elsif sparql =~ /CONSTRUCT/i nt = RestClient.get(sparql_uri, :params => { :query => sparql }, :accept => "text/plain").body return nt if mime_type == 'text/plain' case mime_type when /turtle/ return convert(nt,:ntriples, :turtle) when /html/ # TODO: fix and improve html = "
" html += convert(nt,:ntriples, :turtle).gsub(%r{<(.*)>},'<\1>').gsub(/\n/,'