diff options
author | gebele <gebele@in-silico.ch> | 2015-06-02 12:39:18 +0200 |
---|---|---|
committer | gebele <gebele@in-silico.ch> | 2015-06-02 12:39:18 +0200 |
commit | 36e71b4c9aabcdad0cdff204aba4e196d5737f72 (patch) | |
tree | c9580d76dbcbd2307af0af62e048d22378b7d4a6 | |
parent | 8c73af1e8410796dc7f53f9c8042278b449d1745 (diff) |
adjusted test data and assertions
-rw-r--r-- | test/data/toxbank-investigation/invalid/BII I 1 tb2.zip | bin | 13442 -> 13383 bytes | |||
-rw-r--r-- | test/toxbank-investigation-sparql.rb | 24 |
2 files changed, 10 insertions, 14 deletions
diff --git a/test/data/toxbank-investigation/invalid/BII I 1 tb2.zip b/test/data/toxbank-investigation/invalid/BII I 1 tb2.zip Binary files differindex 7f63181..e7dc244 100644 --- a/test/data/toxbank-investigation/invalid/BII I 1 tb2.zip +++ b/test/data/toxbank-investigation/invalid/BII I 1 tb2.zip diff --git a/test/toxbank-investigation-sparql.rb b/test/toxbank-investigation-sparql.rb index f0e78ad..c72a4d5 100644 --- a/test/toxbank-investigation-sparql.rb +++ b/test/toxbank-investigation-sparql.rb @@ -75,12 +75,10 @@ class TBSPARQLTest < MiniTest::Test def test_06_investigation_endpoint_technology response = OpenTox::RestClientWrapper.get "#{@@uri}/sparql/investigation_endpoint_technology", {}, {:accept => "application/json", :subjectid => $pi[:subjectid]} result = JSON.parse(response) + #puts result endpointtechnologies = result["results"]["bindings"].map {|n| "#{n["endpoint"]["value"]}:::#{n["technology"]["value"]}"} - assert endpointtechnologies.include?("http://purl.org/obo/owl/OBI#0000424:::http://purl.org/obo/owl/OBI#0400148") - assert endpointtechnologies.include?("http://purl.org/obo/owl/OBI#0000366:::http://purl.org/obo/owl/OBI#OBI_0000470") - assert endpointtechnologies.include?("http://purl.org/obo/owl/OBI#OBI_0000615:::http://purl.org/obo/owl/OBI#OBI_0000470") - assert endpointtechnologies.include?("http://purl.org/obo/owl/OBI#0000424:::http://purl.org/obo/owl/OBI#0400148") - assert_equal endpointtechnologies.size, 4 + assert endpointtechnologies.include?("http://purl.org/obo/owl/OBI#424:::http://purl.org/obo/owl/OBI#400148") + assert_equal endpointtechnologies.size, 1 end def test_07_investigation_and_characteristics @@ -96,16 +94,14 @@ class TBSPARQLTest < MiniTest::Test response = OpenTox::RestClientWrapper.get "#{$investigation[:uri]}/sparql/investigations_and_protocols", {}, {:accept => "application/json", :subjectid => $pi[:subjectid]} result = JSON.parse(response) inv_protocols = result["results"]["bindings"].map{|n| "#{n["investigation"]["value"]}:::#{n["protocol"]["value"]}:::#{n["label"]["value"]}"} - #puts inv_protocols - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P2:::biotin labeling") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P6:::EukGE-WS4") + #puts result + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P11:::biotin labeling") + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P4:::EukGE-WS4") assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P1:::metabolite extraction") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P5:::mRNA extraction") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P9:::biotin labeling") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P8:::mRNA extraction") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P4:::protein extraction") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P3:::EukGE-WS4") - assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P7:::ITRAQ labeling") + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P10:::mRNA extraction") + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P5:::protein extraction") + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P3:::growth protocol") + assert inv_protocols.include?("#{@@uri}:::#{@@uri}/P9:::ITRAQ labeling") assert_equal 200, response.code end |