1 files changed, 36 insertions, 0 deletions
diff --git a/test/fminer-long.rb b/test/fminer-long.rb
new file mode 100644
index 0000000..e396145
--- /dev/null
+++ b/test/fminer-long.rb
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+require_relative "setup.rb"
+
+class FminerTest < MiniTest::Test
+
+  def test_fminer_multicell
+    # TODO aborts, probably fminer
+    dataset = OpenTox::MeasuredDataset.new 
+    #multi_cell_call.csv
+    dataset.upload File.join(DATA_DIR,"multi_cell_call.csv")
+    feature_dataset = OpenTox::Algorithm::Fminer.bbrc(:dataset => dataset)#, :min_frequency => 15)
+    dataset.delete
+    feature_dataset.delete
+  end
+
+  def test_fminer_isscan
+    dataset = OpenTox::MeasuredDataset.new 
+    dataset.upload File.join(DATA_DIR,"ISSCAN-multi.csv")
+    feature_dataset = OpenTox::Algorithm::Fminer.bbrc(:dataset => dataset)#, :min_frequency => 15)
+    assert_equal feature_dataset.compounds.size, dataset.compounds.size
+    p feature_dataset
+    dataset.delete
+    feature_dataset.delete
+  end
+
+  def test_fminer_kazius
+    dataset = OpenTox::MeasuredDataset.from_csv_file File.join(DATA_DIR,"kazius.csv")
+    feature_dataset = OpenTox::Algorithm::Fminer.bbrc(:dataset => dataset, :min_frequency => 200)
+    #feature_dataset = OpenTox::Algorithm::Fminer.bbrc(:dataset => dataset)#, :min_frequency => 15)
+    assert_equal feature_dataset.compounds.size, dataset.compounds.size
+    p feature_dataset.compounds.size
+    p feature_dataset.features.size
+    dataset.delete
+    feature_dataset.delete
+  end
+
+end