diff options
author | gebele <gebele@in-silico.ch> | 2015-02-03 16:38:00 +0100 |
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committer | gebele <gebele@in-silico.ch> | 2015-02-03 16:38:00 +0100 |
commit | 0e9c8b75041cf3f081004f0e04d376f9ffca0c09 (patch) | |
tree | 8fd71a6d5abca6ded885f16adf987c3f13ce0ea4 | |
parent | 9542275de949bd10ecffe7fb2e5744841daa5685 (diff) |
updated about this service text
-rw-r--r-- | views/layout.haml | 35 |
1 files changed, 28 insertions, 7 deletions
diff --git a/views/layout.haml b/views/layout.haml index a27be48..a41a3f7 100644 --- a/views/layout.haml +++ b/views/layout.haml @@ -68,24 +68,45 @@ }); %div{:style => "align:justify;padding:1em;"} + %h3 + Predict targets potentially affected by a given chemical structure. + Enter a chemical name, smiles structure, etc and press "Search" to obtain search results and predictions. | + The system will search the <a href="http://pubchem.ncbi.nlm.nih.gov/">PubChem</a> database for | + (i) experimental data of the query compound and | + (ii) structurally similar compounds (neighbors) and their experimental data. | + Predictions for the query compound are derived from the neighbors experimental data using an automated | + read-across algorithm. + %br + %br + The results page is organized according to the following dimensions: %dl %dt - (experimental) + Gene/protein targets vs. other assays: %dd - Filtered experimental data from pubchem database. + PubChem Assays with known Gene/Protein targets are listed in the first column, assays without known | + targets are in the "Other assays" column. %br %br %dt - (read across) + Active vs. inactive targets/assays: %dd - Predictions - results of processed pubchem data. + Targets/assays with positive outcomes are listed as targets/active assays, negative outcomes are | + filed under non-targets/ inactive assays. %br %br %dt - Predictions relationship + Experimental vs. read across: %dd - Similar compounds, predicted assays and predicted targets are related considering relevant data. - If data is insufficent there will be no result displayed. + Experimental data for the query compound is labelled with "experimental", read-across predictions | + are labelled with "read across". In case of insufficient data no results will be displayed.i + %br + %br + %dt + Similar compounds + %dd + Detailed information about the compounds used for read across predictions (and their experimental data) + %br + <small>Source code for the project can be obtained from <a href="https://github.com/opentox/pubchem-read-across">Github</a></small>. %form{:name => "form", :action => '/search', :method => "GET"} %fieldset |