From 0ebf1ea8978344ec5f69e081e3ee7c8ff41602c2 Mon Sep 17 00:00:00 2001
From: rautenberg <rautenberg@in-silico.ch>
Date: Tue, 23 Aug 2016 18:28:57 +0200
Subject: Add QPRF reporting and change name to qsar-report

---
 test/qmrf-report.rb | 74 +++++++++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 74 insertions(+)
 create mode 100644 test/qmrf-report.rb

(limited to 'test/qmrf-report.rb')

diff --git a/test/qmrf-report.rb b/test/qmrf-report.rb
new file mode 100644
index 0000000..0dacd7f
--- /dev/null
+++ b/test/qmrf-report.rb
@@ -0,0 +1,74 @@
+require_relative "setup.rb"
+
+class QMRFReportTest < MiniTest::Test
+
+  def test_0_self
+    puts "MiniTest #{self.class} start OK"
+  end
+
+  def test_1_base
+    report = OpenTox::QMRFReport.new
+    assert report
+    assert_kind_of(OpenTox::QMRFReport, report)
+  end
+
+  def test_2_validate
+    report = OpenTox::QMRFReport.new
+    assert_empty report.validate
+  end
+
+  def test_3_write_some_values
+    report = OpenTox::QMRFReport.new
+    report.Value "QSAR_title", "My QSAR Title"
+    report.Value "QSAR_models", "My QSAR Model"
+    assert_equal report.Value("QSAR_title"), "My QSAR Title"
+    assert_equal report.Value("QSAR_models"), "My QSAR Model"
+    refute_equal report.Value("QSAR_title"), "lazar"
+  end
+
+  def test_4_write_check
+    report = OpenTox::QMRFReport.new
+    report.Value "QSAR_title", "My QSAR Title"
+    report.Value "QSAR_models", "My QSAR Model"
+    assert_equal report.to_xml, File.read(File.join(File.join(DATA_DIR, "qmrf_t4.xml")))
+  end
+
+  def test_5_write_catalog
+    report = OpenTox::QMRFReport.new
+    report.change_catalog :software_catalog, :firstsoftware, {:name => "lazar", :contact => "in-silico toxicology gmbh", :url => "https://lazar.in-silico.ch", :description => "lazar toxicity predictions"}
+    assert "in-silico toxicology gmbh", report.get_catalog_value(:software_catalog, :firstsoftware, :contact)
+    assert "lazar", report.get_catalog_value(:software_catalog, :firstsoftware, :name)
+    assert "https://lazar.in-silico.ch", report.get_catalog_value(:software_catalog, :firstsoftware, :url)
+    assert "lazar toxicity predictions", report.get_catalog_value(:software_catalog, :firstsoftware, :description)
+  end
+
+  def test_6_check_catalog_exists
+    report = OpenTox::QMRFReport.new
+    assert_raises RuntimeError do
+      report.catalog_exists? :noexist_catalog
+    end
+    assert report.catalog_exists? :software_catalog
+  end
+  
+  def test_7_write_alot
+    report = OpenTox::QMRFReport.new
+    report.Value "QSAR_title", "My QSAR Title"
+    report.Value "QSAR_models", "My QSAR Model"
+    report.change_catalog :software_catalog, :firstsoftware, {:name => "lazar", :contact => "in-silico toxicology gmbh", :url => "https://lazar.in-silico.ch", :description => "lazar toxicity predictions"}
+    report.change_catalog :publications_catalog, :publications_catalog_1, {:title => "MyName M (2016) My Publication Title, QSAR News, 10, 14-22", :url => "http://myqsarnewsmag.dom"}
+    report.change_catalog :publications_catalog, :publications_catalog_2, {:title => "MyName M (2016) My Second Publication Title, Hornblower, 101ff.", :url => "http://hornblower.dom"}
+    assert_equal report.to_xml, File.read(File.join(File.join(File.dirname(__FILE__),"data/qmrf_t7.xml")))
+    report.change_catalog :publications_catalog, :publications_catalog_3, {:title => "MyName M (2016) My Third Publication Title, Somewhereelse, 43f.", :url => "http://somewhereelse.dom"}
+    refute_equal report.to_xml, File.read(File.join(File.join(DATA_DIR, "qmrf_t7.xml")))
+  end
+
+  def test_8_ref_catalog_entry
+    report = OpenTox::QMRFReport.new
+    report.change_catalog :authors_catalog, :firstauthor, {:name => "Dr. My MyName", :url => "http://myauthor.dom", :email => "myauthor@myauthor.dom"}
+    report.ref_catalog :qmrf_authors, :authors_catalog, :firstauthor
+    report.change_catalog :authors_catalog, :secondauthor, {:name => "Dr. Mysec MysecName", :url => "http://myauthor.dom", :email => "myauthor@myauthor.dom"}
+    report.ref_catalog :qmrf_authors, :authors_catalog, :secondauthor
+    assert_equal report.to_xml, File.read(File.join(File.join(DATA_DIR, "qmrf_t8.xml")))
+  end
+
+end
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