summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authormr <mr@mrautenberg.de>2010-12-16 11:06:53 +0100
committermr <mr@mrautenberg.de>2010-12-16 11:06:53 +0100
commit54d90f5a1c22fb06e0b4b1e86e36b9975ab4d2e4 (patch)
treeab56b8ce6838f3f7c1bbb3a74a8c73db3220ab37
parent1bc0f0d200cd25102d032dbce85e23c706e6ae72 (diff)
A&A for fminer
-rw-r--r--fminer.rb16
1 files changed, 8 insertions, 8 deletions
diff --git a/fminer.rb b/fminer.rb
index 3b22c64..c52f78c 100644
--- a/fminer.rb
+++ b/fminer.rb
@@ -9,40 +9,40 @@ class FminerTest < Test::Unit::TestCase
=end
def test_bbrc
feature = @@classification_training_dataset.features.keys.first
- dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature}).to_s
+ dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s
d =OpenTox::Dataset.new dataset_uri
d.load_features
assert_equal 41, d.features.size
#validate_owl
- d.delete
+ d.delete(@@subjectid)
end
def test_last
feature = @@classification_training_dataset.features.keys.first
- dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature}).to_s
+ dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s
d =OpenTox::Dataset.new dataset_uri
d.load_features
assert_equal 35, d.features.size
#validate_owl
- d.delete
+ d.delete(@@subjectid)
end
def test_regression_bbrc
feature = File.join @@regression_training_dataset.uri,"feature/LC50_mmol"
- dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature}).to_s
+ dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s
d =OpenTox::Dataset.new dataset_uri
d.load_features
assert_equal 222, d.features.size
- d.delete
+ d.delete(@@subjectid)
end
def test_regression_last
feature = File.join @@regression_training_dataset.uri,"feature/LC50_mmol"
- dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature}).to_s
+ dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s
d =OpenTox::Dataset.new dataset_uri
d.load_features
assert_equal 16, d.features.size
- d.delete
+ d.delete(@@subjectid)
end
=begin
=end