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authorAndreas Maunz <andreas@maunz.de>2011-07-12 15:06:15 +0200
committerAndreas Maunz <andreas@maunz.de>2011-07-12 15:06:15 +0200
commit1262d20d7f9f8ffe8e5dee9c2f6a5da3a6748808 (patch)
tree33b484c249aaca2615478a0dc47e5e88240ddd7a /fminer.rb
parente4ba76a3dab8bf9fc099524588ecc6f99c5e5e50 (diff)
Fixed effects
Diffstat (limited to 'fminer.rb')
-rw-r--r--fminer.rb22
1 files changed, 11 insertions, 11 deletions
diff --git a/fminer.rb b/fminer.rb
index 4927af2..c8cece6 100644
--- a/fminer.rb
+++ b/fminer.rb
@@ -56,7 +56,7 @@ class FminerTest < Test::Unit::TestCase
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/31').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "false"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.97
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&a]-[#6&a]:[#6&a]:[#6&a]:[#6&a]-[#7&A]"
end
@@ -132,7 +132,7 @@ class FminerTest < Test::Unit::TestCase
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/last/3').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "true"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#8&A]=[#6&A]-[#6&A]-[#6&A]"
end
@@ -213,7 +213,7 @@ end
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/31').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "false"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.97
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&a]-[#6&a]:[#6&a]:[#6&a]:[#6&a]-[#7&A]"
end
@@ -256,7 +256,7 @@ end
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/31').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "false"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#8&A]-[#6&A]-[#7&A]-[#7&A]=[#8&A]"
end
@@ -293,23 +293,23 @@ end
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/0').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "1"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 1.00
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&A]-[#6&A](=[#6&A])(-[#6&A])"
end
}
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/92').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "2"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 1
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
- assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&a]:[#6&a](:[#6&a])(:[#6&a]:[#6&a]:[#6&a]:[#6&a]-[#16&A])"
+ assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#7&A]-[#6&a](:[#6&a]:[#6&a]:[#6&a])(:[#6&a]:[#6&a]-[#16&A])"
end
}
@dataset.features.each { |c,e|
if c.to_s.scan('feature/bbrc/42').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "0"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 3
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
- assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&a]:[#6&a](:[#7&a]:[#6&a])(:[#6&a]:[#6&a])"
+ assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&a]:[#6&a]:[#6&a]:[#6&a]:[#6&a]:[#7&a]:[#6&a]"
end
}
cleanup
@@ -343,14 +343,14 @@ end
# assert some values
@dataset.features.each { |c,e|
if c.to_s.scan('feature/last/54').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "0"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 1
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#7&A;$([#7&A](=[#8&A])=[#8&A]),$([#7&A](-[#6&a])=[#8&A])](~*)=[#8&A]"
end
}
@dataset.features.each { |c,e|
if c.to_s.scan('feature/last/48').size > 0
- assert_equal e['http://www.opentox.org/api/1.1#effect'], "1"
+ assert_equal e['http://www.opentox.org/api/1.1#effect'], 2
assert_equal e['http://www.opentox.org/api/1.1#pValue'].to_f.round_to(2), 0.99
assert_equal e['http://www.opentox.org/api/1.1#smarts'], "[#6&A]=[#6&A](-[#6&A])-[#6&A]"
end