diff options
author | Christoph Helma <helma@in-silico.ch> | 2011-01-28 18:11:15 +0100 |
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committer | Christoph Helma <helma@in-silico.ch> | 2011-01-28 18:11:15 +0100 |
commit | 545f4f9e511d8e39a808a1c24de37eb33d2f026e (patch) | |
tree | 7b61495456fe22356e1a8a8e85e3e774878d5af2 /lazar.rb | |
parent | 5f0d5b9ffa13f54b52fa0a41dd2d7f2ab55978f5 (diff) |
auth added
Diffstat (limited to 'lazar.rb')
-rw-r--r-- | lazar.rb | 14 |
1 files changed, 9 insertions, 5 deletions
@@ -31,8 +31,10 @@ class LazarTest < Test::Unit::TestCase model_uri = OpenTox::Algorithm::Lazar.new.run({:dataset_uri => @@classification_training_dataset.uri, :subjectid => @@subjectid}).to_s lazar = OpenTox::Model::Lazar.find model_uri, @@subjectid assert_equal lazar.features.size, 41 + # single prediction compound = OpenTox::Compound.from_smiles("c1ccccc1NN") + #puts compound.uri prediction_uri = lazar.run(:compound_uri => compound.uri, :subjectid => @@subjectid) prediction = OpenTox::LazarPrediction.find(prediction_uri, @@subjectid) assert_equal prediction.value(compound), false @@ -44,7 +46,7 @@ class LazarTest < Test::Unit::TestCase prediction_uri = lazar.run(:compound_uri => compound.uri, :subjectid => @@subjectid) prediction = OpenTox::LazarPrediction.find prediction_uri, @@subjectid assert !prediction.measured_activities(compound).empty? - puts prediction.measured_activities(compound).first.inspect + #puts prediction.measured_activities(compound).first.inspect assert_equal prediction.measured_activities(compound).first, true assert prediction.value(compound).nil? prediction.delete(@@subjectid) @@ -53,13 +55,15 @@ class LazarTest < Test::Unit::TestCase prediction = OpenTox::LazarPrediction.find lazar.run(:dataset_uri => test_dataset.uri, :subjectid => @@subjectid), @@subjectid assert_equal prediction.compounds.size, 4 compound = OpenTox::Compound.new prediction.compounds.first - puts "compound" - puts compound.inspect - puts "prediction" - puts prediction.value(compound).inspect + #puts "compound" + #puts compound.inspect + #puts "prediction" + #puts prediction.value(compound).inspect assert_equal prediction.value(compound), false prediction.delete(@@subjectid) lazar.delete(@@subjectid) +=begin +=end end end |