diff options
Diffstat (limited to 'dataset.rb')
| -rw-r--r-- | dataset.rb | 21 |
1 files changed, 11 insertions, 10 deletions
@@ -32,7 +32,7 @@ class DatasetTest < Test::Unit::TestCase @dataset = OpenTox::Dataset.find "http://apps.ideaconsult.net:8080/ambit2/dataset/2698" #File.open("test.rdf","w+"){|f| f.puts @dataset.to_rdfxml} @dataset.uri = "http://apps.ideaconsult.net:8080/ambit2/dataset" - uri = @dataset.save + uri = @dataset.save(@@subjectid) puts uri #@dataset.load_csv(File.open("data/hamster_carcinogenicity.csv").read) #@dataset.save @@ -40,10 +40,10 @@ class DatasetTest < Test::Unit::TestCase =end def test_create - dataset = OpenTox::Dataset.create - dataset.save + dataset = OpenTox::Dataset.create(CONFIG[:services]["opentox-dataset"], @@subjectid) + dataset.save(@@subjectid) assert_kind_of URI::HTTP, URI.parse(dataset.uri) - dataset.delete + dataset.delete(@@subjectid) end def test_all @@ -65,32 +65,33 @@ class DatasetTest < Test::Unit::TestCase end def test_rest_csv - uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/hamster_carcinogenicity.csv")}).to_s.chomp + uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/hamster_carcinogenicity.csv"), :subjectid => @@subjectid}).to_s.chomp @dataset = OpenTox::Dataset.new uri @dataset.load_all hamster_carc? end def test_multicolumn_csv - uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/multicolumn.csv")}).to_s.chomp + uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/multicolumn.csv"), :subjectid => @@subjectid}).to_s.chomp @dataset = OpenTox::Dataset.new uri @dataset.load_all assert_equal 5, @dataset.features.size assert_equal 4, @dataset.compounds.size + end def test_from_csv @dataset = OpenTox::Dataset.new - @dataset.load_csv(File.open("data/hamster_carcinogenicity.csv").read) + @dataset.load_csv(File.open("data/hamster_carcinogenicity.csv").read, @@subjectid) hamster_carc? - @dataset.delete + @dataset.delete(@@subjectid) end def test_from_excel @dataset = OpenTox::Dataset.new - @dataset.load_spreadsheet(Excel.new("data/hamster_carcinogenicity.xls")) + @dataset.load_spreadsheet(Excel.new("data/hamster_carcinogenicity.xls"), @@subjectid) hamster_carc? - @dataset.delete + @dataset.delete(@@subjectid) end def test_load_metadata |