diff options
Diffstat (limited to 'dataset.rb')
| -rw-r--r-- | dataset.rb | 34 |
1 files changed, 2 insertions, 32 deletions
@@ -4,7 +4,8 @@ require 'test/unit' require 'validate-owl' class DatasetTest < Test::Unit::TestCase - + include TestUtil + def setup @datasets = { @@regression_training_dataset.uri => nil, @@ -261,38 +262,7 @@ class DatasetTest < Test::Unit::TestCase OpenTox::RestClientWrapper.delete(d.uri,{:subjectid => @@subjectid}) end end - - def dataset_equal(d,d2) - assert d.compounds.sort==d2.compounds.sort, - d.compounds.sort.to_yaml+"\n!=\n"+d2.compounds.sort.to_yaml - assert d.features.keys.size==d2.features.keys.size, - d.features.keys.to_yaml+"\n!=\n"+d2.features.keys.to_yaml - assert d.features.keys.sort==d2.features.keys.sort, - d.features.keys.sort.to_yaml+"\n!=\n"+d2.features.keys.sort.to_yaml - d.compounds.each do |c| - d.features.keys.each do |f| - assert_array_about_equal d.data_entries[c][f],d2.data_entries[c][f] - end - end - end - - def assert_array_about_equal(a,a2) - if (a!=nil || a2!=nil) - raise "no arrays #{a.class} #{a2.class}" unless a.is_a?(Array) and a2.is_a?(Array) - assert a.size==a2.size - a.sort! - a2.sort! - a.size.times do |i| - if (a[i].is_a?(Float) and a2[i].is_a?(Float)) - assert (a[i]-a2[i]).abs<0.0000001,"#{a[i]}(#{a[i].class}) != #{a2[i]}(#{a2[i].class})" - else - assert a[i]==a2[i],"#{a[i]}(#{a[i].class}) != #{a2[i]}(#{a2[i].class})" - end - end - end - end - def validate(data) assert_kind_of OpenTox::Dataset, @dataset assert_equal @dataset.data_entries.size, data[:nr_data_entries] if data |