From 385547c7268a50e46351b504cf38ef2e47a37da3 Mon Sep 17 00:00:00 2001 From: davor Date: Mon, 5 Mar 2012 09:29:25 +0100 Subject: Added jl3 results and its factors_configs. --- cv/scripts/factors_config | 5 +++ cv/scripts/factors_config_FHM | 9 +++-- cv/scripts/factors_config_LOAEL | 9 +++-- cv/scripts/factors_config_LOAEL_loo | 9 +++-- cv/scripts/factors_config_MOU | 9 +++-- cv/scripts/factors_config_RAT | 9 +++-- cv/scripts/logs/FHM.log | 56 +++++++++++++++++++++++++++++ cv/scripts/logs/LOAEL.log | 70 +++++++++++++++++++++++++++++++++++++ cv/scripts/logs/LOAEL_loo.log | 65 ++++++++++++++++++++++++++++++++++ cv/scripts/logs/MOU_ttv.log | 65 ++++++++++++++++++++++++++++++++++ cv/scripts/logs/RAT_ttv.log | 65 ++++++++++++++++++++++++++++++++++ 11 files changed, 361 insertions(+), 10 deletions(-) create mode 100644 cv/scripts/logs/FHM.log create mode 100644 cv/scripts/logs/LOAEL.log create mode 100644 cv/scripts/logs/LOAEL_loo.log create mode 100644 cv/scripts/logs/MOU_ttv.log create mode 100644 cv/scripts/logs/RAT_ttv.log diff --git a/cv/scripts/factors_config b/cv/scripts/factors_config index 9afb221..84cd73d 100644 --- a/cv/scripts/factors_config +++ b/cv/scripts/factors_config @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression #FHM constitutional local_svm_regression #FHM electronic,cpsa local_svm_regression #FHM topological local_svm_regression #FHM hybrid local_svm_regression #FHM joelib local_svm_regression +#FHM all_pc local_svm_regression #FHM nil local_svm_regression #RAT constitutional local_svm_regression #RAT electronic,cpsa local_svm_regression #RAT topological local_svm_regression #RAT hybrid local_svm_regression #RAT joelib local_svm_regression +#RAT all_pc local_svm_regression #RAT nil local_svm_regression #MOU constitutional local_svm_regression #MOU electronic,cpsa local_svm_regression #MOU topological local_svm_regression #MOU hybrid local_svm_regression #MOU joelib local_svm_regression +#MOU all_pc local_svm_regression #MOU nil local_svm_regression #LOAEL constitutional local_svm_regression #LOAEL electronic,cpsa local_svm_regression #LOAEL topological local_svm_regression #LOAEL hybrid local_svm_regression #LOAEL joelib local_svm_regression +#LOAEL all_pc local_svm_regression #LOAEL nil local_svm_regression diff --git a/cv/scripts/factors_config_FHM b/cv/scripts/factors_config_FHM index 5ab8521..ac48751 100644 --- a/cv/scripts/factors_config_FHM +++ b/cv/scripts/factors_config_FHM @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression FHM constitutional local_svm_regression FHM electronic,cpsa local_svm_regression FHM topological local_svm_regression -FHM hybrid local_svm_regression +#FHM hybrid local_svm_regression FHM joelib local_svm_regression -FHM nil local_svm_regression +#FHM all_pc local_svm_regression +#FHM nil local_svm_regression #RAT constitutional local_svm_regression #RAT electronic,cpsa local_svm_regression #RAT topological local_svm_regression #RAT hybrid local_svm_regression #RAT joelib local_svm_regression +#RAT all_pc local_svm_regression #RAT nil local_svm_regression #MOU constitutional local_svm_regression #MOU electronic,cpsa local_svm_regression #MOU topological local_svm_regression #MOU hybrid local_svm_regression #MOU joelib local_svm_regression +#MOU all_pc local_svm_regression #MOU nil local_svm_regression #LOAEL constitutional local_svm_regression #LOAEL electronic,cpsa local_svm_regression #LOAEL topological local_svm_regression #LOAEL hybrid local_svm_regression #LOAEL joelib local_svm_regression +#LOAEL all_pc local_svm_regression #LOAEL nil local_svm_regression diff --git a/cv/scripts/factors_config_LOAEL b/cv/scripts/factors_config_LOAEL index 85abf22..4254011 100644 --- a/cv/scripts/factors_config_LOAEL +++ b/cv/scripts/factors_config_LOAEL @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression #FHM constitutional local_svm_regression #FHM electronic,cpsa local_svm_regression #FHM topological local_svm_regression #FHM hybrid local_svm_regression #FHM joelib local_svm_regression +#FHM all_pc local_svm_regression #FHM nil local_svm_regression #RAT constitutional local_svm_regression #RAT electronic,cpsa local_svm_regression #RAT topological local_svm_regression #RAT hybrid local_svm_regression #RAT joelib local_svm_regression +#RAT all_pc local_svm_regression #RAT nil local_svm_regression #MOU constitutional local_svm_regression #MOU electronic,cpsa local_svm_regression #MOU topological local_svm_regression #MOU hybrid local_svm_regression #MOU joelib local_svm_regression +#MOU all_pc local_svm_regression #MOU nil local_svm_regression LOAEL constitutional local_svm_regression LOAEL electronic,cpsa local_svm_regression LOAEL topological local_svm_regression -LOAEL hybrid local_svm_regression +#LOAEL hybrid local_svm_regression LOAEL joelib local_svm_regression -LOAEL nil local_svm_regression +LOAEL all_pc local_svm_regression +#LOAEL nil local_svm_regression diff --git a/cv/scripts/factors_config_LOAEL_loo b/cv/scripts/factors_config_LOAEL_loo index 85abf22..4254011 100644 --- a/cv/scripts/factors_config_LOAEL_loo +++ b/cv/scripts/factors_config_LOAEL_loo @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression #FHM constitutional local_svm_regression #FHM electronic,cpsa local_svm_regression #FHM topological local_svm_regression #FHM hybrid local_svm_regression #FHM joelib local_svm_regression +#FHM all_pc local_svm_regression #FHM nil local_svm_regression #RAT constitutional local_svm_regression #RAT electronic,cpsa local_svm_regression #RAT topological local_svm_regression #RAT hybrid local_svm_regression #RAT joelib local_svm_regression +#RAT all_pc local_svm_regression #RAT nil local_svm_regression #MOU constitutional local_svm_regression #MOU electronic,cpsa local_svm_regression #MOU topological local_svm_regression #MOU hybrid local_svm_regression #MOU joelib local_svm_regression +#MOU all_pc local_svm_regression #MOU nil local_svm_regression LOAEL constitutional local_svm_regression LOAEL electronic,cpsa local_svm_regression LOAEL topological local_svm_regression -LOAEL hybrid local_svm_regression +#LOAEL hybrid local_svm_regression LOAEL joelib local_svm_regression -LOAEL nil local_svm_regression +LOAEL all_pc local_svm_regression +#LOAEL nil local_svm_regression diff --git a/cv/scripts/factors_config_MOU b/cv/scripts/factors_config_MOU index 60f55b0..cbe50c6 100644 --- a/cv/scripts/factors_config_MOU +++ b/cv/scripts/factors_config_MOU @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression #FHM constitutional local_svm_regression #FHM electronic,cpsa local_svm_regression #FHM topological local_svm_regression #FHM hybrid local_svm_regression #FHM joelib local_svm_regression +#FHM all_pc local_svm_regression #FHM nil local_svm_regression #RAT constitutional local_svm_regression #RAT electronic,cpsa local_svm_regression #RAT topological local_svm_regression #RAT hybrid local_svm_regression #RAT joelib local_svm_regression +#RAT all_pc local_svm_regression #RAT nil local_svm_regression MOU constitutional local_svm_regression MOU electronic,cpsa local_svm_regression MOU topological local_svm_regression -MOU hybrid local_svm_regression +#MOU hybrid local_svm_regression MOU joelib local_svm_regression -MOU nil local_svm_regression +MOU all_pc local_svm_regression +#MOU nil local_svm_regression #LOAEL constitutional local_svm_regression #LOAEL electronic,cpsa local_svm_regression #LOAEL topological local_svm_regression #LOAEL hybrid local_svm_regression #LOAEL joelib local_svm_regression +#LOAEL all_pc local_svm_regression #LOAEL nil local_svm_regression diff --git a/cv/scripts/factors_config_RAT b/cv/scripts/factors_config_RAT index b03812a..eb9a0a3 100644 --- a/cv/scripts/factors_config_RAT +++ b/cv/scripts/factors_config_RAT @@ -4,28 +4,33 @@ #MDD topological local_svm_regression #MDD hybrid local_svm_regression #MDD joelib local_svm_regression +#MDD all_pc local_svm_regression #MDD nil local_svm_regression #FHM constitutional local_svm_regression #FHM electronic,cpsa local_svm_regression #FHM topological local_svm_regression #FHM hybrid local_svm_regression #FHM joelib local_svm_regression +#FHM all_pc local_svm_regression #FHM nil local_svm_regression RAT constitutional local_svm_regression RAT electronic,cpsa local_svm_regression RAT topological local_svm_regression -RAT hybrid local_svm_regression +#RAT hybrid local_svm_regression RAT joelib local_svm_regression -RAT nil local_svm_regression +RAT all_pc local_svm_regression +#RAT nil local_svm_regression #MOU constitutional local_svm_regression #MOU electronic,cpsa local_svm_regression #MOU topological local_svm_regression #MOU hybrid local_svm_regression #MOU joelib local_svm_regression +#MOU all_pc local_svm_regression #MOU nil local_svm_regression #LOAEL constitutional local_svm_regression #LOAEL electronic,cpsa local_svm_regression #LOAEL topological local_svm_regression #LOAEL hybrid local_svm_regression #LOAEL joelib local_svm_regression +#LOAEL all_pc local_svm_regression #LOAEL nil local_svm_regression diff --git a/cv/scripts/logs/FHM.log b/cv/scripts/logs/FHM.log new file mode 100644 index 0000000..73a1048 --- /dev/null +++ b/cv/scripts/logs/FHM.log @@ -0,0 +1,56 @@ +20120304_22_: FHM constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_FHM.rb FHM constitutional local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19606 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19606 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/6 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/6/feature/LOGINV_TD50_mmol +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/48 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/79 + +20120304_22_: FHM electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_FHM.rb FHM electronic,cpsa local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19602 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19602 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/6 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/6/feature/LOGINV_TD50_mmol +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/51 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/82 + +20120304_22_: FHM topological local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_FHM.rb FHM topological local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19603 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19603 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/6 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/6/feature/LOGINV_TD50_mmol +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/54 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/86 + +20120304_22_: FHM joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_FHM.rb FHM joelib local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19604 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19604 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/6 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/6/feature/LOGINV_TD50_mmol +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/58 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/88 + diff --git a/cv/scripts/logs/LOAEL.log b/cv/scripts/logs/LOAEL.log new file mode 100644 index 0000000..cf41e8d --- /dev/null +++ b/cv/scripts/logs/LOAEL.log @@ -0,0 +1,70 @@ +20120304_22_: LOAEL constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL.rb LOAEL constitutional local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19618 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19618 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/47 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/78 + +20120304_22_: LOAEL electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL.rb LOAEL electronic,cpsa local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19614 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19614 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/50 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/81 + +20120304_22_: LOAEL topological local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL.rb LOAEL topological local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19615 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19615 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/53 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/83 + +20120304_22_: LOAEL joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL.rb LOAEL joelib local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19616 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19616 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/55 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/85 + +20120304_22_: LOAEL all_pc local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL.rb LOAEL all_pc local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19619 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19619 +:stratified: false +:random_seed: "1" +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/57 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/89 + diff --git a/cv/scripts/logs/LOAEL_loo.log b/cv/scripts/logs/LOAEL_loo.log new file mode 100644 index 0000000..8a911da --- /dev/null +++ b/cv/scripts/logs/LOAEL_loo.log @@ -0,0 +1,65 @@ +20120304_22_: LOAEL constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL constitutional local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19618 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19618 +:loo: true +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/47 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/78 + +20120304_22_: LOAEL electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL electronic,cpsa local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19614 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19614 +:loo: true +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/49 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/80 + +20120304_22_: LOAEL topological local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL topological local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19615 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19615 +:loo: true +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/52 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/84 + +20120304_22_: LOAEL joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL joelib local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19616 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19616 +:loo: true +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/56 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/87 + +20120304_22_: LOAEL all_pc local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL all_pc local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19619 +--- +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19619 +:loo: true +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/59 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/93 + diff --git a/cv/scripts/logs/MOU_ttv.log b/cv/scripts/logs/MOU_ttv.log new file mode 100644 index 0000000..d1ce1a7 --- /dev/null +++ b/cv/scripts/logs/MOU_ttv.log @@ -0,0 +1,65 @@ +20120305_07_: MOU constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_MOU_ttv.rb MOU constitutional local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19624 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/11 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/10/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/10 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19624 +http://toxcreate3.in-silico.ch:8080/validation/9740 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/90 + +20120305_07_: MOU electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_MOU_ttv.rb MOU electronic,cpsa local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19620 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/11 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/10/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/10 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19620 +http://toxcreate3.in-silico.ch:8080/validation/9742 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/92 + +20120305_07_: MOU topological local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_MOU_ttv.rb MOU topological local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19621 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/11 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/10/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/10 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19621 +http://toxcreate3.in-silico.ch:8080/validation/9744 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/95 + +20120305_07_: MOU joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_MOU_ttv.rb MOU joelib local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19622 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/11 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/10/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/10 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19622 +http://toxcreate3.in-silico.ch:8080/validation/9746 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/97 + +20120305_07_: MOU all_pc local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_MOU_ttv.rb MOU all_pc local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19625 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/11 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/10/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/10 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19625 +http://toxcreate3.in-silico.ch:8080/validation/9748 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/98 + diff --git a/cv/scripts/logs/RAT_ttv.log b/cv/scripts/logs/RAT_ttv.log new file mode 100644 index 0000000..75cfbb7 --- /dev/null +++ b/cv/scripts/logs/RAT_ttv.log @@ -0,0 +1,65 @@ +20120305_07_: RAT constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_RAT_ttv.rb RAT constitutional local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19612 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/13 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/12/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/12 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19612 +http://toxcreate3.in-silico.ch:8080/validation/9741 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/91 + +20120305_07_: RAT electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_RAT_ttv.rb RAT electronic,cpsa local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19608 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/13 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/12/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/12 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19608 +http://toxcreate3.in-silico.ch:8080/validation/9743 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/94 + +20120305_07_: RAT topological local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_RAT_ttv.rb RAT topological local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19609 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/13 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/12/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/12 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19609 +http://toxcreate3.in-silico.ch:8080/validation/9745 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/96 + +20120305_07_: RAT joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_RAT_ttv.rb RAT joelib local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19610 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/13 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/12/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/12 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19610 +http://toxcreate3.in-silico.ch:8080/validation/9747 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/99 + +20120305_07_: RAT all_pc local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_RAT_ttv.rb RAT all_pc local_svm_regression 1 +datasets.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19613 +--- +:test_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/13 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/12/feature/pTD50 +:training_dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/12 +:algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/19613 +http://toxcreate3.in-silico.ch:8080/validation/9749 +http://toxcreate3.in-silico.ch:8080/validation/report/validation/100 + -- cgit v1.2.3