From 18701b87f9a4c02354b514adb3261823810728d9 Mon Sep 17 00:00:00 2001 From: davor Date: Thu, 22 Mar 2012 17:26:16 +0100 Subject: LOAEL(mmol, corrected) ds and results of 29 jl4 Feature ds created with rfe(subsets between 0.3-0.7) from all numeric LOAEL ds(corrected SMILES). --- cv/scripts/logs/LOAEL_loo.log | 93 +++++++++++++++++++++---------------------- 1 file changed, 46 insertions(+), 47 deletions(-) (limited to 'cv/scripts/logs/LOAEL_loo.log') diff --git a/cv/scripts/logs/LOAEL_loo.log b/cv/scripts/logs/LOAEL_loo.log index 2a1c45a..2ff583c 100644 --- a/cv/scripts/logs/LOAEL_loo.log +++ b/cv/scripts/logs/LOAEL_loo.log @@ -1,65 +1,64 @@ -20120320_22_: LOAEL constitutional local_svm_regression 1 -ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL constitutional local_svm_regression 1 ../data/datasets.yaml -datasets.yaml exists ---- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130605 +20120322_00_: LOAEL constitutional local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL constitutional local_svm_regression 1 ../data/datasets_new_LOAEL_mol_allnum_rfe.yaml +datasets_new_LOAEL_mol_allnum_rfe.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141117 --- :algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar -:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130605 +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=constitutional;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141117 :loo: true -:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 -:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day -http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/284 -http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/363 +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/120088 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/120088/feature/LOAEL_log_mmol_kg_bw_day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/299 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/376 -20120320_22_: LOAEL electronic,cpsa local_svm_regression 1 -ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL electronic,cpsa local_svm_regression 1 ../data/datasets.yaml -datasets.yaml exists ---- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130523 +20120322_00_: LOAEL electronic,cpsa local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL electronic,cpsa local_svm_regression 1 ../data/datasets_new_LOAEL_mol_allnum_rfe.yaml +datasets_new_LOAEL_mol_allnum_rfe.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/140901 --- :algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar -:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130523 +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=electronic,cpsa;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/140901 :loo: true -:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 -:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day -http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/287 -http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/365 +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/120088 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/120088/feature/LOAEL_log_mmol_kg_bw_day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/302 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/378 -20120320_22_: LOAEL topological local_svm_regression 1 -ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL topological local_svm_regression 1 ../data/datasets.yaml -datasets.yaml exists ---- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130603 ---- +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL topological local_sv +m_regression 1 ../data/datasets_new_LOAEL_mol_allnum_rfe.yaml +datasets_new_LOAEL_mol_allnum_rfe.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate +3.in-silico.ch:8080/dataset/141115 +--- :algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar -:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130603 +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=topological;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141115 :loo: true -:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 -:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day -http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/289 -http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/368 +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/120088 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/120088/feature/LOAEL_log_mmol_kg_bw_day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/309 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/389 -20120320_22_: LOAEL joelib local_svm_regression 1 -ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL joelib local_svm_regression 1 ../data/datasets.yaml -datasets.yaml exists ---- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130604 +20120322_00_: LOAEL joelib local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL joelib local_svm_regression 1 ../data/datasets_new_LOAEL_mol_allnum_rfe.yaml +datasets_new_LOAEL_mol_allnum_rfe.yaml exists +--- prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141116 --- :algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar -:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130604 +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=joelib;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141116 :loo: true -:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 -:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day -http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/292 -http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/370 +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/120088 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/120088/feature/LOAEL_log_mmol_kg_bw_day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/306 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/381 -20120320_22_: LOAEL all_pc local_svm_regression 1 -ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL all_pc local_svm_regression 1 ../data/datasets.yaml -datasets.yaml exists ---- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130606 +20120322_00_: LOAEL all_pc local_svm_regression 1 +ruby CV_ds_pctype_algo_rseed_LOAEL_loo.rb LOAEL all_pc local_svm_regression 1 ../data/datasets_new_LOAEL_mol_allnum_rfe.yaml +--- prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141121 --- :algorithm_uri: http://toxcreate3.in-silico.ch:8080/algorithm/lazar -:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/130606 +:algorithm_params: prediction_algorithm=local_svm_regression;pc_type=all_pc;feature_dataset_uri=http://toxcreate3.in-silico.ch:8080/dataset/141121 :loo: true -:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/9 -:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/9/feature/LOAEL_mol/kg_bw/day -http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/293 -http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/371 - +:dataset_uri: http://toxcreate3.in-silico.ch:8080/dataset/120088 +:prediction_feature: http://toxcreate3.in-silico.ch:8080/dataset/120088/feature/LOAEL_log_mmol_kg_bw_day +http://toxcreate3.in-silico.ch:8080/validation/crossvalidation/308 +http://toxcreate3.in-silico.ch:8080/validation/report/crossvalidation/390 -- cgit v1.2.3