require 'rubygems' require 'opentox-ruby' require 'test/unit' class TransformTest < Test::Unit::TestCase def test_mlr 2.times { n_prop = [ [1,1], [2,2], [3,3] ] # erste WH acts = [ 3,2,3 ] # should yield a constant y=2.8 sims = [ 4,2,4 ] # move constant closer to 3.0 q_prop = [0.5,0.5] # extrapolation params={:n_prop => n_prop, :q_prop => q_prop, :sims => sims, :acts => acts} prediction = OpenTox::Algorithm::Neighbors.mlr(params) assert_in_delta prediction, 2.8, 1.0E-10 # small deviations, don't know why q_prop = [1.5,1.5] # interpolation prediction = OpenTox::Algorithm::Neighbors.mlr(params) assert_in_delta prediction, 2.8, 1.0E-10 # small deviations, don't know why } end # def test_pca # # d = GSL::Matrix.alloc([1,1.1,2,1.9,3,3.3], 3, 2) # td = GSL::Matrix.alloc([-1.3421074161875, -0.127000127000191, 1.46910754318769],3,1) # ev = GSL::Matrix.alloc([0.707106781186548, 0.707106781186548], 2, 1) # rd = GSL::Matrix.alloc([1.05098674493306, 1.043223563717, 1.91019734898661, 2.0, 3.03881590608033, 3.256776436283], 3, 2) # # # Lossy # 2.times do # repeat to ensure idempotency # pca = OpenTox::Algorithm::Transform::PCA.new(d, 0.05) # assert_equal pca.data_matrix, d # assert_equal pca.data_transformed_matrix, td # assert_equal pca.eigenvector_matrix, ev # assert_equal pca.restore, rd # end # # td = GSL::Matrix.alloc([-1.3421074161875, 0.0721061461855949, -0.127000127000191, -0.127000127000191, 1.46910754318769, 0.0548939808145955],3,2) # ev = GSL::Matrix.alloc([0.707106781186548, -0.707106781186548, 0.707106781186548, 0.707106781186548], 2, 2) # # # Lossless # 2.times do # pca = OpenTox::Algorithm::Transform::PCA.new(d, 0.0) # assert_equal pca.data_matrix, d # assert_equal pca.data_transformed_matrix, td # assert_equal pca.eigenvector_matrix, ev # assert_equal pca.restore, d # end # # end end