diff options
| author | Christoph Helma <helma@in-silico.ch> | 2011-02-23 17:12:08 +0100 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2011-02-23 17:12:08 +0100 |
| commit | f020b6324e567459cb5ce309371142052782ee86 (patch) | |
| tree | 15d783efd5fbca268c1e5d5a0b9352dec62c859d | |
| parent | d65363b4a0e152a978c8cc0bc974e6aab562135d (diff) | |
lazar.haml added again
| -rw-r--r-- | views/lazar.haml | 59 |
1 files changed, 59 insertions, 0 deletions
diff --git a/views/lazar.haml b/views/lazar.haml new file mode 100644 index 0000000..3de7400 --- /dev/null +++ b/views/lazar.haml @@ -0,0 +1,59 @@ +%p= link_to "New prediction", "/predict"
+.lazar-predictions
+
+ -# explanations
+ = haml :lazar_algorithm, :layout => false
+ = haml :confidence, :layout => false
+ = haml :similarity, :layout => false
+ = haml :significant_fragments, :layout => false
+ = haml :training_data, :layout => false
+
+ %a{:name => "prediction"}
+ %table
+ %thead
+ %tr
+ %th= @prediction.title
+ %th= toggle_link("#lazar_algorithm","Prediction")
+ %th= toggle_link("#confidence","Confidence")
+ %th Supporting information
+
+ %tr
+ -# %td
+ %img{:src => @compound.to_image_uri, :alt => @compound.to_smiles}
+ %td.image= compound_image(@compound,@prediction.descriptors(@compound))
+ %td= activity_markup(@prediction.value(@compound))
+ %td= sprintf('%.03g', @prediction.confidence(@compound))
+ -#%td= @prediction.confidence(@compound)
+ %td
+ %ul
+ %li
+ %a{:href => "#prediction", :id => "show_names"} Names and synonyms
+ :javascript
+ $("a#show_names").click(function () {
+ $("#compound_names").load("#{File.join("/compound",@compound.inchi)}");
+ $("tr#names").toggle();
+ });
+ %li= toggle_link("#fragments","Significant fragments")
+ -# This does not work, ask nina/vedrin
+ -# %li
+ %a{:href => "http://ambit.uni-plovdiv.bg:8080/ambit2/query/structure/?search=#{@compound.smiles}"} Ambit data
+ -# %li
+ %a{:href => "http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=PureSearch&db=pccompound&term=#{URI.encode('"'+@compound.inchi+'"[InChI]')}"} PubChem data
+ (external)
+ -# %li
+ %a{:href => "http://chem.sis.nlm.nih.gov/chemidplus/direct.jsp?result=advanced&inchi=#{URI.encode @compound.inchi}"} ToxNet data
+ -#http://chem.sis.nlm.nih.gov/chemidplus/direct.jsp?result=advanced®no=000143157
+
+ %tr#names{ :style => "display: none;" }
+ %td{:colspan => '4'}
+ %a{:name => 'names'}
+ = hide_link('#names')
+ #compound_names
+ %tr#fragments{ :style => "display: none;" }
+ %td{:colspan => '4'}
+ = hide_link('#fragments')
+ = haml :feature_table, :locals => {:features => sort(@prediction.descriptors(@compound))}, :layout => false
+
+ %tbody#neighbors
+ = haml :neighbors, :locals => {:neighbors => @prediction.neighbors(@compound), :page => @page}, :layout => false
+
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