From 99a50ecb6c6cbff678048c2f60eafcfe476c1b64 Mon Sep 17 00:00:00 2001
From: mr <mr@mrautenberg.de>
Date: Mon, 10 Oct 2011 12:47:52 +0200
Subject: add endpoint to features

---
 application.rb    | 4 ++--
 helper.rb         | 2 +-
 views/create.haml | 4 ++--
 3 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/application.rb b/application.rb
index 3ed2af6..a75c6c0 100644
--- a/application.rb
+++ b/application.rb
@@ -1,7 +1,7 @@
 ['rubygems', "haml", "sass", "rack-flash"].each do |lib|
   require lib
 end
-gem "opentox-ruby", "~> 2"
+gem "opentox-ruby", "~> 3"
 require 'opentox-ruby'
 gem 'sinatra-static-assets'
 require 'sinatra/static_assets'
@@ -280,6 +280,7 @@ post '/models' do # create a new model
         else
           raise "#{params[:file][:filename]} has an unsupported file type."
         end
+        @dataset.features[@dataset.features.keys.first][OWL.sameAs] = params[:endpoint].split(',').first if params[:endpoint]
         @dataset.save(@subjectid)
       rescue => e
         error "Dataset creation failed '#{e.message}'",e
@@ -290,7 +291,6 @@ post '/models' do # create a new model
         @prediction_feature = OpenTox::Feature.find(@dataset.features.keys.first,@subjectid)
       end
     end
-
     task.progress(10)
     if @dataset.compounds.size < 10
       error "Too few compounds to create a prediction model. Did you provide compounds in SMILES format and classification activities as described in the #{link_to "instructions", "/help"}? As a rule of thumb you will need at least 100 training compounds for nongeneric datasets. A lower number could be sufficient for congeneric datasets."
diff --git a/helper.rb b/helper.rb
index 234d612..0bcde74 100644
--- a/helper.rb
+++ b/helper.rb
@@ -134,7 +134,7 @@ helpers do
   end
 
   def endpoint_selection()
-    out = "<span id='endpoint_label'></span><input type='button' id='endpoint_list_button' value='select endpoint' /> \n
+    out = "<span id='endpoint_label'></span><input type='button' id='endpoint_list_button' value='Select endpoint' /> \n
     <div id='div_endpoint'>\n"
     out += "<b>Please select:</b>\n"
     out += endpoint_level
diff --git a/views/create.haml b/views/create.haml
index acfa098..a26ae05 100644
--- a/views/create.haml
+++ b/views/create.haml
@@ -15,11 +15,11 @@
    $("#endpoint_list_button").click(function() {
      if ($("div#div_endpoint").is(":hidden")) {
        $("div#div_endpoint").slideDown("slow");
-       $("input#endpoint_list_button").val("OK");
+       $("input#endpoint_list_button").val("Hide");
        $("input#endpoint_list_button").toggleClass("ok_button", true);
      } else {
        $("div#div_endpoint").slideUp("slow");
-       $("input#endpoint_list_button").val("select endpoint");
+       $("input#endpoint_list_button").val("Select endpoint");
        $("input#endpoint_list_button").toggleClass("ok_button", false);
      }
    });
-- 
cgit v1.2.3