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authormguetlein <martin.guetlein@gmail.com>2011-06-17 12:11:02 +0200
committermguetlein <martin.guetlein@gmail.com>2011-06-17 12:11:02 +0200
commita5b5c0790de08b4deee7d72851070201cca1c744 (patch)
treec1b944c378c0601da8611fa9278bba99963a4087
parent5d66676376bd491344f06294a0921575aa9c39f6 (diff)
prefer prediction_feature, use Model.dependentVariables if no prediction feature is specified
-rwxr-xr-xvalidation/validation_service.rb21
1 files changed, 3 insertions, 18 deletions
diff --git a/validation/validation_service.rb b/validation/validation_service.rb
index 8d64cd1..77cc694 100755
--- a/validation/validation_service.rb
+++ b/validation/validation_service.rb
@@ -135,7 +135,6 @@ module Validation
params[alg_param[0].to_sym] = alg_param[1]
end
end
- LOGGER.debug "building model '"+algorithm_uri.to_s+"' "+params.inspect
algorithm = OpenTox::Algorithm::Generic.new(algorithm_uri)
params[:subjectid] = subjectid
@@ -169,26 +168,12 @@ module Validation
model = OpenTox::Model::Generic.find(self.model_uri, self.subjectid)
unless self.algorithm_uri
-# self.attributes = { :algorithm_uri => model.algorithm }
-# self.save!
- #self.update :algorithm_uri => model.algorithm
self.algorithm_uri = model.metadata[OT.algorithm]
end
-
- if self.prediction_feature and model.uri=~/ambit2\/model/
- LOGGER.warn "REMOVE AMBIT HACK TO __NOT__ RELY ON DEPENDENT VARIABLE"
- else
+ if self.prediction_feature.to_s.size==0
dependentVariables = model.metadata[OT.dependentVariables]
- if self.prediction_feature
- raise OpenTox::NotFoundError.new "error validating model: model.dependent_variable != validation.prediction_feature ("+
- dependentVariables.to_s+" != "+self.prediction_feature+"), model-metadata is "+model.metadata.inspect if self.prediction_feature!=dependentVariables
- else
- raise OpenTox::NotFoundError.new "model has no dependentVariables specified, please give prediction feature for model validation" unless dependentVariables
- #self.attributes = { :prediction_feature => model.dependentVariables }
- #self.save!
- #self.update :prediction_feature => model.dependentVariables
- self.prediction_feature = model.metadata[OT.dependentVariables]
- end
+ raise OpenTox::NotFoundError.new "model has no dependentVariables specified, please give prediction_feature for model validation" unless dependentVariables
+ self.prediction_feature = model.metadata[OT.dependentVariables]
end
prediction_dataset_uri = ""