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-rw-r--r--test/test_examples.rb28
1 files changed, 28 insertions, 0 deletions
diff --git a/test/test_examples.rb b/test/test_examples.rb
index d7edba0..8927fb1 100644
--- a/test/test_examples.rb
+++ b/test/test_examples.rb
@@ -81,6 +81,30 @@ module ValidationExamples
end
########################################################################################################
+
+ class HamsterBootstrapping < BootstrappingValidation
+ def initialize
+ @dataset_file = File.new("data/hamster_carcinogenicity.yaml","r")
+ @prediction_feature = "http://localhost/toxmodel/feature#Hamster%20Carcinogenicity%20(DSSTOX/CPDB)"
+ end
+ end
+
+ class LazarHamsterBootstrapping < HamsterBootstrapping
+ def initialize
+ @algorithm_uri = File.join(@@config[:services]["opentox-algorithm"],"lazar")
+ @algorithm_params = "feature_generation_uri="+File.join(@@config[:services]["opentox-algorithm"],"fminer")
+ super
+ end
+ end
+
+ class MajorityHamsterBootstrapping < HamsterBootstrapping
+ def initialize
+ @algorithm_uri = File.join(@@config[:services]["opentox-majority"],"/class/algorithm")
+ super
+ end
+ end
+
+ ########################################################################################################
class HamsterTrainingTest < TrainingTestValidation
def initialize
@@ -303,6 +327,10 @@ module ValidationExamples
"10a" => [ ISTLazarISTEpaCrossvalidation ],
"11b" => [ MajorityISTRatLiverCrossvalidation ],
+
+ "12" => [ LazarHamsterBootstrapping, MajorityHamsterBootstrapping ],
+ "12a" => [ LazarHamsterBootstrapping ],
+ "12b" => [ MajorityHamsterBootstrapping ],
}
def self.list