# = Reports::ReportContent # # wraps an xml-report, adds functionality for adding sections, adds a hash for tmp files # class Reports::ReportContent attr_accessor :xml_report, :tmp_files def initialize(title) @xml_report = Reports::XMLReport.new(title, Time.now.strftime("Created at %m.%d.%Y - %H:%M")) @tmp_file_count = 0 @current_section = @xml_report.get_root_element end def add_section( section_title, section_text=nil ) @current_section = @xml_report.add_section(@xml_report.get_root_element, section_title) @xml_report.add_paragraph(@current_section, section_text) if section_text end def end_section() @current_section = @xml_report.get_root_element end def add_paired_ttest_table( validation_set, group_attribute, test_attribute, section_title = "Paired t-test", section_text = nil) level = 0.90 test_matrix = Reports::ReportStatisticalTest.test_matrix( validation_set.validations, group_attribute, test_attribute, "paired_ttest", level ) puts test_matrix.inspect titles = test_matrix[:titles] matrix = test_matrix[:matrix] table = [] puts titles.inspect table << [""] + titles titles.size.times do |i| table << [titles[i]] + matrix[i].collect{|v| (v==nil || v==0) ? "" : (v<0 ? "-" : "+") } end section_test = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_test, section_text) if section_text @xml_report.add_table(section_test, test_attribute.to_s+", significance-level: "+level.to_s, table, true, true) end def add_predictions( validation_set, validation_attributes=[], section_title="Predictions", section_text=nil, table_title="Predictions") #PENING raise "validation attributes not implemented in get prediction array" if validation_attributes.size>0 section_table = @xml_report.add_section(@current_section, section_title) if validation_set.validations[0].get_predictions @xml_report.add_paragraph(section_table, section_text) if section_text @xml_report.add_table(section_table, table_title, Lib::OTPredictions.to_array(validation_set.validations.collect{|v| v.get_predictions}, true, true)) else @xml_report.add_paragraph(section_table, "No prediction info available.") end end def add_result_overview( validation_set, attribute_col, attribute_row, attribute_values, table_titles=nil, section_title="Result overview", section_text=nil ) section_table = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_table, section_text) if section_text attribute_values.size.times do |i| attribute_val = attribute_values[i] table_title = table_titles ? table_titles[i] : "Result overview for "+attribute_val.to_s vals = validation_set.to_table( attribute_col, attribute_row, attribute_val) @xml_report.add_table(section_table, table_title, vals, true, true) end end # result (could be transposed) # # attr1 | attr2 | attr3 # ===========|===========|=========== # val1-attr1 |val1-attr2 |val1-attr3 # val2-attr1 |val2-attr2 |val2-attr3 # val3-attr1 |val3-attr2 |val3-attr3 # def add_result( validation_set, validation_attributes, table_title, section_title="Results", section_text=nil, #rem_equal_vals_attr=[], search_for_existing_report_type=nil) section_table = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_table, section_text) if section_text vals = validation_set.to_array(validation_attributes, true) vals = vals.collect{|a| a.collect{|v| v.to_s }} if (search_for_existing_report_type) vals.size.times do |i| puts i if (i==0) vals[i] = [ "Reports" ] + vals[i] puts vals[i].inspect else if search_for_existing_report_type=="validation" vals[i] = [ validation_set.validations[i-1].validation_report_uri() ] + vals[i] elsif search_for_existing_report_type=="crossvalidation" vals[i] = [ validation_set.validations[i-1].cv_report_uri() ] + vals[i] else raise "illegal report type: "+search_for_existing_report_type.to_s end end end end #PENDING transpose values if there more than 4 columns, and there are more than columns than rows transpose = vals[0].size>4 && vals[0].size>vals.size @xml_report.add_table(section_table, table_title, vals, !transpose, transpose, transpose) end def add_confusion_matrix( validation, section_title="Confusion Matrix", section_text=nil, table_title="Confusion Matrix") section_confusion = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_confusion, section_text) if section_text @xml_report.add_table(section_confusion, table_title, Reports::XMLReportUtil::create_confusion_matrix( validation.confusion_matrix ), true, true) end def add_regression_plot( validation_set, name_attribute, section_title="Regression Plot", section_text=nil, image_title=nil, image_caption=nil) image_title = "Regression plot" unless image_title section_regr = @xml_report.add_section(@current_section, section_title) prediction_set = validation_set.collect{ |v| v.get_predictions } if prediction_set.size>0 section_text += "\nWARNING: regression plot information not available for all validation results" if prediction_set.size!=validation_set.size @xml_report.add_paragraph(section_regr, section_text) if section_text plot_file_name = "regr_plot"+@tmp_file_count.to_s+".svg" @tmp_file_count += 1 begin plot_file_path = add_tmp_file(plot_file_name) Reports::PlotFactory.create_regression_plot( plot_file_path, prediction_set, name_attribute ) @xml_report.add_imagefigure(section_regr, image_title, plot_file_name, "SVG", 120, image_caption) rescue RuntimeError => ex LOGGER.error("Could not create regression plot: "+ex.message) rm_tmp_file(plot_file_name) @xml_report.add_paragraph(section_regr, "could not create regression plot: "+ex.message) end else @xml_report.add_paragraph(section_regr, "No prediction info for regression available.") end end def add_roc_plot( validation_set, split_set_attribute = nil, section_title="ROC Plots", section_text=nil, image_titles=nil, image_captions=nil) section_roc = @xml_report.add_section(@current_section, section_title) prediction_set = validation_set.collect{ |v| v.get_predictions && v.get_predictions.confidence_values_available? } if prediction_set.size>0 if prediction_set.size!=validation_set.size section_text += "\nWARNING: roc plot information not available for all validation results" LOGGER.error "WARNING: roc plot information not available for all validation results:\n"+ "validation set size: "+validation_set.size.to_s+", prediction set size: "+prediction_set.size.to_s end @xml_report.add_paragraph(section_roc, section_text) if section_text class_domain = validation_set.get_class_domain class_domain.size.times do |i| class_value = class_domain[i] image_title = image_titles ? image_titles[i] : "ROC Plot for class-value '"+class_value.to_s+"'" image_caption = image_captions ? image_captions[i] : nil plot_file_name = "roc_plot"+@tmp_file_count.to_s+".svg" @tmp_file_count += 1 begin plot_file_path = add_tmp_file(plot_file_name) Reports::PlotFactory.create_roc_plot( plot_file_path, prediction_set, class_value, split_set_attribute, false )#prediction_set.size>1 ) @xml_report.add_imagefigure(section_roc, image_title, plot_file_name, "SVG", 120, image_caption) rescue RuntimeError => ex msg = "WARNING could not create roc plot for class value '"+class_value.to_s+"': "+ex.message LOGGER.error(msg) rm_tmp_file(plot_file_name) @xml_report.add_paragraph(section_roc, msg) end end else @xml_report.add_paragraph(section_roc, "No prediction-confidence info for roc plot available.") end end def add_ranking_plots( validation_set, compare_attribute, equal_attribute, rank_attributes, section_title="Ranking Plots", section_text="This section contains the ranking plots.") section_rank = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_rank, section_text) if section_text rank_attributes.each do |a| add_ranking_plot(section_rank, validation_set, compare_attribute, equal_attribute, a) end end def add_ranking_plot( report_section, validation_set, compare_attribute, equal_attribute, rank_attribute, image_titles=nil, image_captions=nil) class_domain = validation_set.get_domain_for_attr(rank_attribute) puts "ranking plot for "+rank_attribute.to_s+", class values: "+class_domain.to_s class_domain.size.times do |i| class_value = class_domain[i] if image_titles image_title = image_titles[i] else if class_value!=nil image_title = rank_attribute.to_s+" Ranking Plot for class-value '"+class_value.to_s+"'" else image_title = rank_attribute.to_s+" Ranking Plot" end end image_caption = image_captions ? image_captions[i] : nil plot_file_name = "ranking_plot"+@tmp_file_count.to_s+".svg" @tmp_file_count += 1 plot_file_path = add_tmp_file(plot_file_name) Reports::PlotFactory::create_ranking_plot(plot_file_path, validation_set, compare_attribute, equal_attribute, rank_attribute, class_value) @xml_report.add_imagefigure(report_section, image_title, plot_file_name, "SVG", 75, image_caption) end end def add_bar_plot(validation_set, title_attribute, value_attributes, section_title="Bar Plot", section_text=nil, image_title="Bar Plot", image_caption=nil) section_bar = @xml_report.add_section(@current_section, section_title) @xml_report.add_paragraph(section_bar, section_text) if section_text plot_file_name = "bar_plot"+@tmp_file_count.to_s+".svg" @tmp_file_count += 1 plot_file_path = add_tmp_file(plot_file_name) Reports::PlotFactory.create_bar_plot(plot_file_path, validation_set, title_attribute, value_attributes ) @xml_report.add_imagefigure(section_bar, image_title, plot_file_name, "SVG", 120, image_caption) end private def add_tmp_file(tmp_file_name) @tmp_files = {} unless @tmp_files raise "file name already exits" if @tmp_files[tmp_file_name] || (@text_files && @text_files[tmp_file_name]) tmp_file_path = Reports::Util.create_tmp_file(tmp_file_name) @tmp_files[tmp_file_name] = tmp_file_path return tmp_file_path end def rm_tmp_file(tmp_file_name) @tmp_files.delete(tmp_file_name) if @tmp_files.has_key?(tmp_file_name) end end