update Services Poster

14 files changed, 72 insertions, 23 deletions

diff --git a/Makefile b/Makefile
index 85d31b9..18ffac1 100644
--- a/Makefile
+++ b/Makefile
@@ -17,9 +17,9 @@ exampleposter:
 nmsa-ist-services:
 	./md2tex.sh nmsa-ist-services.tex
 	$(PDFLATEX) nmsa-ist-services.tex
-	# $(BIBTEX) nmsa-ist-services
-	# $(PDFLATEX) nmsa-ist-services.tex
-	# $(PDFLATEX) nmsa-ist-services.tex
+	$(BIBTEX) nmsa-ist-services
+	$(PDFLATEX) nmsa-ist-services.tex
+	$(PDFLATEX) nmsa-ist-services.tex
 	#./dockercmd.sh /bin/sh -c "./md2tex.sh nmsa-ist-services.tex && pdflatex nmsa-ist-services.tex"
 
 # Poster enm-ontoviewer
diff --git a/markdown_blocks/rest_integration.md b/markdown_blocks/rest_integration.md
index 01a891c..d63f909 100644
--- a/markdown_blocks/rest_integration.md
+++ b/markdown_blocks/rest_integration.md
@@ -1,7 +1,7 @@
 lazar-rest provides a REST webservice for the nano-lazar framework. 
 The lazar framework integrates internal libraries, eNanoMapper
 resources (Data Warehouse and Ontologies) and external resources like UniProt and
-BioPortal. The lazar-rest services makes the lazar framework accessible
+BioPortal. lazar-rest services make the lazar framework accessible
 for other webservices and web applications and for users who prefer the
 command line over graphical user interfaces.
 
diff --git a/markdown_blocks/rest_lazar-rest.md b/markdown_blocks/rest_lazar-rest.md
index 5a6ab82..1058e38 100644
--- a/markdown_blocks/rest_lazar-rest.md
+++ b/markdown_blocks/rest_lazar-rest.md
@@ -1,3 +1,3 @@
-lazar-rest is a Ruby library, that it provides a REST interface for nano-lazar. 
+lazar-rest is a Ruby library, that provides a REST interface for nano-lazar. 
 The API is compatible with eNanoMapper specifications and documented with the Swagger API framework (version 2.0), 
 which conforms with the Open API Initiative specification. 
\ No newline at end of file
diff --git a/markdown_blocks/rest_links.md b/markdown_blocks/rest_links.md
index 37279a5..356f473 100644
--- a/markdown_blocks/rest_links.md
+++ b/markdown_blocks/rest_links.md
@@ -8,6 +8,9 @@
 * Nano-lazar REST API services source code repository
   <https://github.com/opentox/lazar-rest>
   
+* Nano-lazar REST API services gem library
+  <https://rubygems.org/gems/lazar-rest>
+
 * Nano-lazar REST API services Rubydocs gem library documentation
   <http://www.rubydoc.info/gems/lazar-rest>
 
diff --git a/markdown_blocks/services_aa.md b/markdown_blocks/services_aa.md
index 9205888..44c12d3 100644
--- a/markdown_blocks/services_aa.md
+++ b/markdown_blocks/services_aa.md
@@ -1,2 +1,4 @@
+IST has conceived, setup and maintained an infrastructure for authentication and authorization.
+
 * Single sign-on authorization & authentication service
-  <https://openam.in-silico.ch/openam/> 
\ No newline at end of file
+  <https://openam.in-silico.ch/openam/>
\ No newline at end of file
diff --git a/markdown_blocks/services_docker.md b/markdown_blocks/services_docker.md
new file mode 100644
index 0000000..f06a0ac
--- /dev/null
+++ b/markdown_blocks/services_docker.md
@@ -0,0 +1,4 @@
+Docker, is an open platform container management tool that allows easily to manage, build, ship, and run distributed applications.
+
+* Public available dockerized IST services on Docker Hub
+  <https://hub.docker.com/u/insilicotox/>
diff --git a/markdown_blocks/services_infrastructure.md b/markdown_blocks/services_infrastructure.md
index ecdaff4..3b3549c 100644
--- a/markdown_blocks/services_infrastructure.md
+++ b/markdown_blocks/services_infrastructure.md
@@ -1,11 +1,19 @@
-* Bugzilla Issue tracker
+IST support the eNanoMapper infrastructure with a brought range of services.
+
+* Bugzilla Issue tracker (project internal)
   <https://bugzilla.enanomapper.net/>
 
-* Mailman mailing list for partner, developers and ontologies 
+* Mailman mailing list for partner, developers and associate-partners
   <http://lists.enanomapper.net/>
 
-* 
-  <>
+* Maintenance for scripts to query the eNM ontology at purl.enanomapper.org
+  (e.g. <https://purl.enanomapper.net/php/ENM_0000018>)
+
+* Registration form and user management
+  <https://purl.enanomapper.net/register/>
+
+* LDAP user database server and replication server
+  <ldap.opentox.org>
 
-* 
-  <>
\ No newline at end of file
+* Blog entries on eNanoMapper IST specific technical implementation
+  <http://opentox.github.io/archive>
\ No newline at end of file
diff --git a/markdown_blocks/services_lazar-rest.md b/markdown_blocks/services_lazar-rest.md
index 607f29b..12f80a3 100644
--- a/markdown_blocks/services_lazar-rest.md
+++ b/markdown_blocks/services_lazar-rest.md
@@ -1,3 +1,7 @@
+The nano-lazar Rest API interface provides a Restful web service. It is the web service implementation of
+the nano-lazar Ruby API for obtaining information on data in the nano-lazar framework and for
+performing predictions and descriptor calculations.
+
 * Nano-lazar REST API GUI. Swagger UI based documentation for API visualization and interaction.
   \
   <https://enm.in-silico.ch>
@@ -7,7 +11,10 @@
 
 * Nano-lazar REST API services source code repository
   <https://github.com/opentox/lazar-rest>
-  
+
+* Nano-lazar REST API services gem library\cite{rautenberg_micha_2016_187328}
+  <https://rubygems.org/gems/lazar-rest>
+
 * Nano-lazar REST API services Rubydocs gem library documentation
   <http://www.rubydoc.info/gems/lazar-rest>
 
diff --git a/markdown_blocks/services_lazar.md b/markdown_blocks/services_lazar.md
index d1527c8..fa870e9 100644
--- a/markdown_blocks/services_lazar.md
+++ b/markdown_blocks/services_lazar.md
@@ -1,3 +1,9 @@
+* Lazar Ruby gem library\cite{helma_christoph_2016_215483}
+  <https://rubygems.org/gems/lazar>
+
+* Lazar toxicity prediction UI
+  <https://lazar.in-silico.ch>
+
 * Lazar (source code)
   <https://github.com/opentox/lazar>
   
diff --git a/markdown_blocks/services_nano-lazar.md b/markdown_blocks/services_nano-lazar.md
index 232be6a..385654a 100644
--- a/markdown_blocks/services_nano-lazar.md
+++ b/markdown_blocks/services_nano-lazar.md
@@ -1,4 +1,4 @@
-* Nano-lazar for toxicity predictions - graphical user interface. 
+* Nano-lazar for toxicity predictions - graphical user interface\cite{gebele_denis_2017_250818}. 
   \
   <https://nano-lazar.in-silico.ch>
 
diff --git a/markdown_blocks/services_ontoviewer.md b/markdown_blocks/services_ontoviewer.md
index ab0b0c1..3d20f84 100644
--- a/markdown_blocks/services_ontoviewer.md
+++ b/markdown_blocks/services_ontoviewer.md
@@ -1,2 +1,10 @@
-* eNM ontology viewer 
-  <https://purl.enanomapper.org/>
\ No newline at end of file
+The eNanoMapper ontology viewer application visualizes SPARQL query results from eNM ontologies ad data.
+
+* eNanoMapper ontology viewer 
+  <https://query.enanomapper.org/>
+
+* eNanoMapper ontology viewer source code repository 
+  <https://github.com/enanomapper/enm-ontoviewer>
+ 
+* eNanoMapper ontology viewer issues
+  <https://github.com/enanomapper/enm-ontoviewer/issues>
\ No newline at end of file
diff --git a/markdown_blocks/services_qsar-report.md b/markdown_blocks/services_qsar-report.md
index e3a6355..a347992 100644
--- a/markdown_blocks/services_qsar-report.md
+++ b/markdown_blocks/services_qsar-report.md
@@ -1,4 +1,6 @@
-* QSAR report - Ruby gem library
+The QSAR-report Ruby gem library was developed to extend nano-lazar with QMRF and QPRF reporting features.
+
+* QSAR report - Ruby gem library\cite{rautenberg_micha_2016_179038} for QMRF and QPRF reporting
   <https://rubygems.org/gems/qsar-report/>
 
 * QSAR report - Rubydoc documentation
diff --git a/markdown_blocks/services_sparql.md b/markdown_blocks/services_sparql.md
index e69de29..be667e6 100644
--- a/markdown_blocks/services_sparql.md
+++ b/markdown_blocks/services_sparql.md
@@ -0,0 +1,7 @@
+A SPARQL query interface for eNanoMapper data and ontologies has been established.
+
+* SPARQL endpoint
+  <https://sparql.enanomapper.org/>
+
+* Documentation in "Deliverable 3.2 Data Management System with extended search capabilities" - 3.2.3.1. SPARQL endpoint
+  <http://enanomapper.net/deliverables/d3/20160420_eNanoMapper_D3.2_Data_Management_System_with_extended_search_capabilities_FINAL.pdf>
\ No newline at end of file
diff --git a/nmsa-ist-services.tex b/nmsa-ist-services.tex
index d7406a5..542faba 100644
--- a/nmsa-ist-services.tex
+++ b/nmsa-ist-services.tex
@@ -29,6 +29,10 @@
         \input{./markdown_blocks/services_nano-lazar}
       \end{block}
 
+      \begin{block}{nano-lazar-paper}
+        \input{./markdown_blocks/services_nano-lazar-paper}
+      \end{block}
+
       \begin{block}{lazar-rest}
         \input{./markdown_blocks/services_lazar-rest}
       \end{block}
@@ -46,6 +50,10 @@
 
     \begin{textblock}{40.5}(42.6,8.6)
 
+      \begin{block}{Docker}
+        \input{./markdown_blocks/services_docker}
+      \end{block}
+
       \begin{block}{Authorization \& Authentication}
         \input{./markdown_blocks/services_aa}
       \end{block}
@@ -58,18 +66,12 @@
         \input{./markdown_blocks/services_infrastructure}
       \end{block}
 
-
-
       \begin{block}{References}
         \small\bibliography{references}
       \end{block}
 
     \end{textblock}
 
-    \begin{textblock}{82.1}(1,88)
-      \input{./markdown_blocks/exampletext}
-    \end{textblock}
-
   \end{frame}
 
 \end{document}