summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorChristoph Helma <helma@in-silico.ch>2011-03-08 17:15:36 +0100
committerChristoph Helma <helma@in-silico.ch>2011-03-08 17:15:36 +0100
commit1c53e3aa29870149a5d86559fc37d98fcaaec3fb (patch)
treee0be40908cd1bc08ffee32a39a364f612327d54a
parent0fe43af37ec650f391779e0ed780fdd6de81e1b6 (diff)
only external validation supported
-rw-r--r--debian.sh2
-rw-r--r--opentox-webservices.sh12
-rw-r--r--production.yaml2
3 files changed, 8 insertions, 8 deletions
diff --git a/debian.sh b/debian.sh
index d23977d..7102a5e 100644
--- a/debian.sh
+++ b/debian.sh
@@ -17,7 +17,7 @@ apt-get install binutils gcc g++ gfortran wget hostname pwgen git-core raptor-ut
echo sun-java6-jdk shared/accepted-sun-dlj-v1-1 select true | /usr/bin/debconf-set-selections
apt-get install --yes sun-java6-jdk -y
. ./config
-apt-get install xsltproc gnuplot -y # for validation
+#apt-get install xsltproc gnuplot -y # for validation
apt-get install libssl-dev zlib1g-dev libreadline-dev libmysqlclient-dev libmysqlclient-dev libcurl4-openssl-dev libxml2-dev libxslt1-dev libgsl0-dev -y
sed -i '/^JAVA_HOME=/d' /etc/profile
echo 'export JAVA_HOME=/usr/lib/jvm/java-6-sun' | tee -a /etc/profile
diff --git a/opentox-webservices.sh b/opentox-webservices.sh
index d67c706..d9208ad 100644
--- a/opentox-webservices.sh
+++ b/opentox-webservices.sh
@@ -22,12 +22,12 @@ for s in compound dataset algorithm model toxcreate task; do
done
# validation service
-git clone http://github.com/mguetlein/opentox-validation.git validation
-cd /var/www/opentox/validation
-git checkout -t origin/test
-gem install ruby-plot
-mkdir -p public
-ln -s /var/www/opentox/validation/public /var/www/validation
+#git clone http://github.com/mguetlein/opentox-validation.git validation
+#cd /var/www/opentox/validation
+#git checkout -t origin/test
+#gem install ruby-plot
+#mkdir -p public
+#ln -s /var/www/opentox/validation/public /var/www/validation
# fminer etc
cd /var/www/opentox/algorithm
diff --git a/production.yaml b/production.yaml
index f6d19cd..0e77ddd 100644
--- a/production.yaml
+++ b/production.yaml
@@ -8,7 +8,7 @@
opentox-model: "http://SERVERNAME/model/"
opentox-task: "http://SERVERNAME/task/"
opentox-toxcreate: "http://SERVERNAME/toxcreate/"
- opentox-validation: "http://SERVERNAME/validation/"
+ opentox-validation: "http://opentox.informatik.uni-freiburg.de/validation/"
:yaml_hosts:
- "localhost"