diff options
| -rwxr-xr-x | base-install.sh | 2 | ||||
| -rwxr-xr-x | kernlab.sh | 40 | ||||
| -rwxr-xr-x | nginx.sh | 27 | ||||
| -rwxr-xr-x | openbabel.sh | 54 | ||||
| -rwxr-xr-x | ruby.sh | 28 |
5 files changed, 79 insertions, 72 deletions
diff --git a/base-install.sh b/base-install.sh index c19b6d6..a0a6c94 100755 --- a/base-install.sh +++ b/base-install.sh @@ -21,7 +21,7 @@ if [ ! -e $APTITUDE ]; then fi # Dest -JAVA_CONF=$HOME/.bash_java_ot +source ./config.sh # Pkgs packs="lsb-release binutils gcc g++ gfortran wget hostname pwgen git-core raptor-utils r-base sun-java6-jdk libssl-dev zlib1g-dev libreadline-dev libmysqlclient-dev libcurl4-openssl-dev libxml2-dev libxslt1-dev libgsl0-dev sun-java6-jdk" @@ -23,13 +23,9 @@ if [ ! -e "$R" ]; then fi # Pkg -VER="0.9-11" - -# Dest -R_CONF="$HOME/.bash_R_ot" -DEST="$HOME/r-packages" +source ./config.sh if [ -n "$1" ]; then - DEST="$1" + KL_DEST="$1" fi @@ -40,38 +36,40 @@ read DIR="`pwd`" R_DONE=false -mkdir "$DEST" >/dev/null 2>&1 -if [ ! -d "$DEST" ]; then - echo "Install directory '$DEST' is not available! Aborting..." +mkdir "$KL_DEST" >/dev/null 2>&1 +if [ ! -d "$KL_DEST" ]; then + echo "Install directory '$KL_DEST' is not available! Aborting..." exit 1 else - if ! rmdir "$DEST" >/dev/null 2>&1; then # if not empty this will fail - echo "Install directory '$DEST' is not empty. Skipping kernlab installation..." + if ! rmdir "$KL_DEST" >/dev/null 2>&1; then # if not empty this will fail + echo "Install directory '$KL_DEST' is not empty. Skipping kernlab installation..." R_DONE=true + else + mkdir "$KL_DEST" >/dev/null 2>&1 fi fi if ! $R_DONE; then cd /tmp - if ! $WGET -O - "http://cran.r-project.org/src/contrib/Archive/kernlab/kernlab_$VER.tar.gz">/dev/null 2>&1; then + if ! $WGET -O - "http://cran.r-project.org/src/contrib/Archive/kernlab/kernlab_$KL_VER.tar.gz">/dev/null 2>&1; then echo "Download failed! Aborting..." exit 1 fi - export R_LIBS="$DEST" - $R CMD INSTALL "kernlab_$VER.tar.gz" + export R_LIBS="$KL_DEST" + $R CMD INSTALL "kernlab_$KL_VER.tar.gz" fi echo echo "Preparing R..." -if [ ! -f $R_CONF ]; then - echo "export R_LIBS=\"$DEST\"" >> "$R_CONF" - echo "R package destination has been stored in '$R_CONF'." +if [ ! -f $KL_CONF ]; then + echo "export R_LIBS=\"$KL_DEST\"" >> "$KL_CONF" + echo "R package destination has been stored in '$KL_CONF'." echo -n "Decide if R configuration should be linked to your .bashrc ('y/n'): " - read ANSWER_R_CONF - if [ $ANSWER_R_CONF = "y" ]; then - echo "source \"$R_CONF\"" >> $HOME/.bashrc + read ANSWER_KL_CONF + if [ $ANSWER_KL_CONF = "y" ]; then + echo "source \"$KL_CONF\"" >> $HOME/.bashrc fi else - echo "It seems R is already configured ('$R_CONF' exists)." + echo "It seems R is already configured ('$KL_CONF' exists)." fi cd "$DIR" @@ -1,11 +1,26 @@ -#!/bin/sh +#!/bin/bash +# +# Installs Passenger. +# Author: Christoph Helma, Andreas Maunz. +# -. /etc/profile -passenger-install-nginx-module --auto-download --auto --prefix=/opt/nginx +if [ "$(id -u)" = "0" ]; then + echo "This script must be run as non-root." 1>&2 + exit 1 +fi -cd /opt/ruby-enterprise-1.8.7-2010.03/lib/ruby/gems/1.8/gems/ +# Utils +PIN="`which passenger-install-nginx-module`" +if [ ! -e "$PIN" ]; then + echo "'passenger-install-nginx-module' missing. Install 'passenger-install-nginx-module' first. Aborting..." + exit 1 +fi + +source ./config.sh +$PIN --auto-download --auto --prefix="$NGINX_DEST" + +cd $RUBY_DEST/lib/ruby/gems/1.8/gems/ passenger=`ls -d passenger*`; cd - servername=`hostname`.`dnsdomainname` -echo $passenger -sed -e "s/PASSENGER/$passenger/;s/SERVERNAME/$servername/" nginx.conf > /opt/nginx/conf/nginx.conf +sed -e "s/PASSENGER/$passenger/;s/SERVERNAME/$servername/" ./nginx.conf > $NGINX_DEST/nginx.conf diff --git a/openbabel.sh b/openbabel.sh index f132fd5..c75ca8d 100755 --- a/openbabel.sh +++ b/openbabel.sh @@ -18,13 +18,11 @@ if [ ! -e "$WGET" ]; then fi # Pkg -VER="2.2.3" -OBVER="openbabel-$VER" -PREFIX="$HOME/$OBVER" +source ./config if [ -n "$1" ]; then - PREFIX="$1" + OB_DEST="$1" fi -PREFIX_BINDINGS="$HOME/openbabel-ruby-install" +OB_DEST_BINDINGS="$HOME/openbabel-ruby-install" # Dest OB_CONF=$HOME/.bash_OB_ot @@ -32,31 +30,31 @@ RUBY_CONF=$HOME/.bash_ruby_ot echo "This installs Openbabel." -echo "Your installation directory is '$PREFIX'." +echo "Your installation directory is '$OB_DEST'." echo "A configuration file is created and you are given the option to have it included in your '~.bashrc'." echo "Press <Return> to continue, or <Ctrl+C> to abort." read DIR="`pwd`" -mkdir "$PREFIX" >/dev/null 2>&1 -if [ ! -d "$PREFIX" ]; then - echo "Install directory '$PREFIX' is not available! Aborting..." +mkdir "$OB_DEST" >/dev/null 2>&1 +if [ ! -d "$OB_DEST" ]; then + echo "Install directory '$OB_DEST' is not available! Aborting..." exit 1 else - if ! rmdir "$PREFIX" >/dev/null 2>&1; then # if not empty this will fail - echo "Install directory '$PREFIX' is not empty. Skipping openbabel base installation..." + if ! rmdir "$OB_DEST" >/dev/null 2>&1; then # if not empty this will fail + echo "Install directory '$OB_DEST' is not empty. Skipping openbabel base installation..." OB_DONE=true fi fi if [ ! $OB_DONE ]; then cd /tmp - if ! $WGET -O - "http://downloads.sourceforge.net/project/openbabel/openbabel/$VER/$OBVER.tar.gz?use_mirror=kent" | tar zxv >/dev/null 2>&1; then + if ! $WGET -O - "http://downloads.sourceforge.net/project/openbabel/openbabel/$OB_NUM_VER/$OB_VER.tar.gz?use_mirror=kent" | tar zxv >/dev/null 2>&1; then echo "Download failed! Aborting..." exit 1 fi - cd "/tmp/$OBVER" - ./configure --prefix="$PREFIX" + cd "/tmp/$OB_VER" + ./configure --prefix="$OB_DEST" make make install fi @@ -69,21 +67,21 @@ echo -n "Enter 's' to skip this step: " read RBB_SKIP if [ "$RBB_SKIP" != "s" ]; then OB_DONE=false - mkdir "$PREFIX_BINDINGS">/dev/null 2>&1 - if [ ! -d "$PREFIX_BINDINGS" ]; then - echo "Install directory '$PREFIX_BINDINGS' is not available! Aborting..." + mkdir "$OB_DEST_BINDINGS">/dev/null 2>&1 + if [ ! -d "$OB_DEST_BINDINGS" ]; then + echo "Install directory '$OB_DEST_BINDINGS' is not available! Aborting..." exit 1 else - if [ "`ls $PREFIX_BINDINGS | wc -l`" -gt 0 ]; then - echo "Install directory '$PREFIX_BINDINGS' is not empty. Skipping Openbabel Binding installation..." + if [ "`ls $OB_DEST_BINDINGS | wc -l`" -gt 0 ]; then + echo "Install directory '$OB_DEST_BINDINGS' is not empty. Skipping Openbabel Binding installation..." OB_DONE=true fi fi if ! $OB_DONE ; then - cd "/tmp/$OBVER/scripts/ruby/" - ruby extconf.rb --with-openbabel-include="$PREFIX/include/openbabel-2.0" + cd "/tmp/$OB_VER/scripts/ruby/" + ruby extconf.rb --with-openbabel-include="$OB_DEST/include/openbabel-2.0" if make ; then - cp openbabel.so $PREFIX_BINDINGS + cp openbabel.so $OB_DEST_BINDINGS else echo echo "Make failed! Aborting..." @@ -97,20 +95,20 @@ cd "$DIR" echo echo "Preparing Openbabel..." if [ ! -f $OB_CONF ]; then - echo "PATH=$PREFIX/bin:\$PATH" >> "$OB_CONF" + echo "PATH=$OB_DEST/bin:\$PATH" >> "$OB_CONF" echo "if [ -z \"\$LD_LIBRARY_PATH\" ]; then \ - export LD_LIBRARY_PATH=\"$PREFIX/lib\"; \ + export LD_LIBRARY_PATH=\"$OB_DEST/lib\"; \ else \ - export LD_LIBRARY_PATH=\"$PREFIX/lib:\$LD_LIBRARY_PATH\"; \ + export LD_LIBRARY_PATH=\"$OB_DEST/lib:\$LD_LIBRARY_PATH\"; \ fi" >> "$OB_CONF" echo "if [ -z \"\$BABEL_LIBDIR\" ]; then \ - export BABEL_LIBDIR=\"$PREFIX/lib/openbabel/2.3.0\"; \ + export BABEL_LIBDIR=\"$OB_DEST/lib/openbabel/2.3.0\"; \ fi" >> "$OB_CONF" echo "if [ -z \"\$BABEL_DATADIR\" ]; then \ - export BABEL_DATADIR=\"$PREFIX/share/openbabel/2.3.0\"; \ + export BABEL_DATADIR=\"$OB_DEST/share/openbabel/2.3.0\"; \ fi" >> "\$OB_CONF" echo "if [ -z \"\$RUBYLIB\" ]; then \ - export RUBYLIB=\"$PREFIX_BINDINGS\"; \ + export RUBYLIB=\"$OB_DEST_BINDINGS\"; \ fi" >> "$RUBY_CONF" echo "Openbabel configuration has been stored in '$OB_CONF'." @@ -18,22 +18,18 @@ if [ ! -e "$WGET" ]; then fi # Pkg -RUBYVER="ruby-enterprise-1.8.7-2011.03" -PREFIX="$HOME/$RUBYVER" +source ./config.sh if [ -n "$1" ]; then - PREFIX="$1" + RUBY_DEST="$1" fi -# Dest -RUBY_CONF=$HOME/.bash_ruby_ot - -mkdir "$PREFIX" >/dev/null 2>&1 -if [ ! -d "$PREFIX" ]; then - echo "Install directory '$PREFIX' is not available! Aborting..." +mkdir "$RUBY_DEST" >/dev/null 2>&1 +if [ ! -d "$RUBY_DEST" ]; then + echo "Install directory '$RUBY_DEST' is not available! Aborting..." exit 1 else - if ! rmdir "$PREFIX" >/dev/null 2>&1; then # if not empty this will fail - echo "Install directory '$PREFIX' is not empty. Skipping Ruby installation..." + if ! rmdir "$RUBY_DEST" >/dev/null 2>&1; then # if not empty this will fail + echo "Install directory '$RUBY_DEST' is not empty. Skipping Ruby installation..." RUBY_DONE=true fi fi @@ -41,16 +37,16 @@ fi DIR="`pwd`" if [ ! $RUBY_DONE ]; then echo "This installs Ruby Enterprise edition." - echo "Your installation directory is '$PREFIX'." + echo "Your installation directory is '$RUBY_DEST'." echo "A configuration file is created and you are given the option to have it included in your '~.bashrc'." echo "Press <Return> to continue, or <Ctrl+C> to abort." read cd /tmp - if ! $WGET -O - "http://rubyenterpriseedition.googlecode.com/files/$RUBYVER.tar.gz" | tar zxv >/dev/null 2>&1 ; then + if ! $WGET -O - "http://rubyenterpriseedition.googlecode.com/files/$RUBY_VER.tar.gz" | tar zxv >/dev/null 2>&1 ; then echo "Download failed! Aborting..." exit 1 fi - sh /tmp/$RUBYVER/installer --dont-install-useful-gems --no-dev-docs --auto="$PREFIX" + sh /tmp/$RUBY_VER/installer --dont-install-useful-gems --no-dev-docs --auto="$RUBY_DEST" fi echo @@ -61,7 +57,7 @@ echo "Press <Return> to continue, or <Ctrl+C> to abort." echo -n "Enter 's' to skip this step: " read PASSENGER_SKIP if [ "$PASSENGER_SKIP" != "s" ]; then - export PATH="$PREFIX/bin:$PATH" + export PATH="$RUBY_DEST/bin:$PATH" gem sources -a "http://gemcutter.org " gem sources -r "http://rubygems.org/" echo "gem: --no-ri --no-rdoc" | tee -a $HOME/.gemrc @@ -72,7 +68,7 @@ cd "$DIR" echo echo "Preparing RUBY..." if [ ! -f $RUBY_CONF ]; then - echo "PATH=$PREFIX/bin:\$PATH" >> "$RUBY_CONF" + echo "PATH=$RUBY_DEST/bin:\$PATH" >> "$RUBY_CONF" echo "Ruby configuration has been stored in '$RUBY_CONF'." echo -n "Decide if Ruby configuration should be linked to your .bashrc ('y/n'): " read ANSWER_JAVA_CONF |