more rest poster, collecting links for services

13 files changed, 72 insertions, 8 deletions

diff --git a/markdown_blocks/integration_links.md b/markdown_blocks/integration_links.md
index 7de44f7..1882463 100644
--- a/markdown_blocks/integration_links.md
+++ b/markdown_blocks/integration_links.md
@@ -1,10 +1,10 @@
-* eNM Data Warehouse <https://data.enanomapper.net>
+* eNM data warehouse <https://data.enanomapper.net>
 
-* eNM Ontologies <https://github.com/enanomapper/ontologies>
+* eNM ontologies <https://github.com/enanomapper/ontologies>
 
 * nano-lazar GUI <http://nano-lazar.in-silico.ch>
 
-* eNM Ontology Viewer <https://query.enanomapper.net/enm-viewer>
+* eNM ontology viewer <https://query.enanomapper.net/enm-viewer>
 
 * nano-lazar REST interface <https://enm.enanomapper.org>
 
diff --git a/markdown_blocks/integration_summary.md b/markdown_blocks/integration_summary.md
index c62f645..871516a 100644
--- a/markdown_blocks/integration_summary.md
+++ b/markdown_blocks/integration_summary.md
@@ -1,6 +1,6 @@
 During the eNanoMapper project in silico toxicologies (IST) public services
 were adapted to the specification of the eNanoMapper API and new nanoparticle
-specific developments were implemented.  This poster will depict the
+specific developments were implemented.  This poster depict the
 interaction of IST services with eNanoMapper resources of other partners which
 covers use cases like data download/mirroring, augmentation of GUIs with
 ontology queries and nanoparticle descriptor calculation.
diff --git a/markdown_blocks/rest_examples.md b/markdown_blocks/rest_examples.md
index ee9f615..7bd49d6 100644
--- a/markdown_blocks/rest_examples.md
+++ b/markdown_blocks/rest_examples.md
@@ -4,11 +4,11 @@ Get an URI list for all models:
 ```
 
 Retrieve an JSON representation of a model:
-```Bash
+```bash
   curl -X GET -H 'Accept: application/json' -H 'accept: application/json' 'https://enm.in-silico.ch/model/<MODELID>'
 ```
 
 Predict a nano-particle:
 ```Bash
-  curl -X POST -H 'Content-Type: application/x-www-form-urlencoded' -H 'Accept:text/html' -d 'identifier= \ https://enm.in-silico.ch/nanoparticle/<NANOPARTICLEID>' 'https://enm.in-silico.ch/model/<MODELID>'
+  curl -X POST -H 'Content-Type: application/x-www-form-urlencoded' -H 'Accept:text/html' -d 'identifier= https://enm.in-silico.ch/nanoparticle/<NANOPARTICLEID>' 'https://enm.in-silico.ch/model/<MODELID>'
 ```
\ No newline at end of file
diff --git a/markdown_blocks/rest_integration.md b/markdown_blocks/rest_integration.md
index e0cb402..01a891c 100644
--- a/markdown_blocks/rest_integration.md
+++ b/markdown_blocks/rest_integration.md
@@ -6,4 +6,4 @@ for other webservices and web applications and for users who prefer the
 command line over graphical user interfaces.
 
 
-![nano-lazar service integration](./images/rest_integration.pdf " nano-lazar service integration")
\ No newline at end of file
+![nano-lazar service integration](./images/rest_integration.pdf "nano-lazar service integration"){width=1400px}
\ No newline at end of file
diff --git a/markdown_blocks/rest_qmrf.md b/markdown_blocks/rest_qmrf.md
index aa65b6b..6a3997b 100644
--- a/markdown_blocks/rest_qmrf.md
+++ b/markdown_blocks/rest_qmrf.md
@@ -1,4 +1,4 @@
-lazar-rest supports QMRF reporting. The integrated QSAR-report library 
+lazar-rest supports (Q)SAR Model Reporting Format (QMRF). The integrated QSAR-report library\cite{rautenberg_micha_2016_179038} 
 generates QMRF reports in XML format with basic model information (e.g.
 validation results according to OECD guidelines). The QMRF report
 library is independent of other IST libraries (e.g. lazar,
diff --git a/markdown_blocks/services_aa.md b/markdown_blocks/services_aa.md
new file mode 100644
index 0000000..9205888
--- /dev/null
+++ b/markdown_blocks/services_aa.md
@@ -0,0 +1,2 @@
+* Single sign-on authorization & authentication service
+  <https://openam.in-silico.ch/openam/> 
\ No newline at end of file
diff --git a/markdown_blocks/services_infrastructure.md b/markdown_blocks/services_infrastructure.md
new file mode 100644
index 0000000..ecdaff4
--- /dev/null
+++ b/markdown_blocks/services_infrastructure.md
@@ -0,0 +1,11 @@
+* Bugzilla Issue tracker
+  <https://bugzilla.enanomapper.net/>
+
+* Mailman mailing list for partner, developers and ontologies 
+  <http://lists.enanomapper.net/>
+
+* 
+  <>
+
+* 
+  <>
\ No newline at end of file
diff --git a/markdown_blocks/services_lazar-rest.md b/markdown_blocks/services_lazar-rest.md
new file mode 100644
index 0000000..607f29b
--- /dev/null
+++ b/markdown_blocks/services_lazar-rest.md
@@ -0,0 +1,15 @@
+* Nano-lazar REST API GUI. Swagger UI based documentation for API visualization and interaction.
+  \
+  <https://enm.in-silico.ch>
+
+* Nano-lazar Swagger API definition file
+  <https://enm.in-silico.ch/api/api.json> 
+
+* Nano-lazar REST API services source code repository
+  <https://github.com/opentox/lazar-rest>
+  
+* Nano-lazar REST API services Rubydocs gem library documentation
+  <http://www.rubydoc.info/gems/lazar-rest>
+
+* Nano-lazar REST API issue tracker
+  <https://github.com/opentox/lazar-rest/issues>
\ No newline at end of file
diff --git a/markdown_blocks/services_lazar.md b/markdown_blocks/services_lazar.md
new file mode 100644
index 0000000..d1527c8
--- /dev/null
+++ b/markdown_blocks/services_lazar.md
@@ -0,0 +1,8 @@
+* Lazar (source code)
+  <https://github.com/opentox/lazar>
+  
+* Lazar issue tracker
+  <https://github.com/opentox/lazar/issues>
+
+* Lazar Rubydocs gem library documentation
+  <http://www.rubydoc.info/gems/lazar>
\ No newline at end of file
diff --git a/markdown_blocks/services_nano-lazar.md b/markdown_blocks/services_nano-lazar.md
new file mode 100644
index 0000000..232be6a
--- /dev/null
+++ b/markdown_blocks/services_nano-lazar.md
@@ -0,0 +1,12 @@
+* Nano-lazar for toxicity predictions - graphical user interface. 
+  \
+  <https://nano-lazar.in-silico.ch>
+
+* Nano-lazar source code repository
+  <https://github.com/eNanoMapper/nano-lazar>
+  
+* Nano-lazar Rubydocs gem library documentation
+  <http://www.rubydoc.info/gems/nano-lazar>
+
+* Nano-lazar REST API issue tracker
+  <https://github.com/eNanoMapper/nano-lazar/issues>
\ No newline at end of file
diff --git a/markdown_blocks/services_ontoviewer.md b/markdown_blocks/services_ontoviewer.md
new file mode 100644
index 0000000..ab0b0c1
--- /dev/null
+++ b/markdown_blocks/services_ontoviewer.md
@@ -0,0 +1,2 @@
+* eNM ontology viewer 
+  <https://purl.enanomapper.org/>
\ No newline at end of file
diff --git a/markdown_blocks/services_qsar-report.md b/markdown_blocks/services_qsar-report.md
new file mode 100644
index 0000000..e3a6355
--- /dev/null
+++ b/markdown_blocks/services_qsar-report.md
@@ -0,0 +1,14 @@
+* QSAR report - Ruby gem library
+  <https://rubygems.org/gems/qsar-report/>
+
+* QSAR report - Rubydoc documentation
+  <http://www.rubydoc.info/gems/qsar-report>
+
+* QSAR report - Ruby gem library source code
+  <https://github.com/opentox/qsar-report>
+
+* QSAR report - Ruby gem library issue tracker
+  <https://github.com/opentox/qsar-report/issues>
+
+* QSAR report - Tutorial
+  <http://opentox.github.io/usage/2016/10/05/qmrf-and-qprf-reporting-library-gem>
\ No newline at end of file
diff --git a/markdown_blocks/services_sparql.md b/markdown_blocks/services_sparql.md
new file mode 100644
index 0000000..e69de29
--- /dev/null
+++ b/markdown_blocks/services_sparql.md