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author | Christoph Helma <helma@in-silico.ch> | 2016-02-13 13:15:29 +0100 |
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committer | Christoph Helma <helma@in-silico.ch> | 2016-02-13 13:15:29 +0100 |
commit | e778475c578f13f30af4437845716d7e781c2609 (patch) | |
tree | 82c14dabc4cf29df1f097a9f8c5c4d8b0b406c4d /lib/crossvalidation.rb | |
parent | f61b7d3c65d084747dc1bf87214e5ec0c57326be (diff) |
improved handling of duplicates in validations
Diffstat (limited to 'lib/crossvalidation.rb')
-rw-r--r-- | lib/crossvalidation.rb | 3 |
1 files changed, 0 insertions, 3 deletions
diff --git a/lib/crossvalidation.rb b/lib/crossvalidation.rb index 9789882..0c5f0be 100644 --- a/lib/crossvalidation.rb +++ b/lib/crossvalidation.rb @@ -176,7 +176,6 @@ module OpenTox mae = 0 weighted_mae = 0 confidence_sum = 0 - p predictions predictions.each do |pred| compound_id,activity,prediction,confidence = pred if activity and prediction @@ -195,8 +194,6 @@ module OpenTox y = predictions.collect{|p| p[2]} R.assign "measurement", x R.assign "prediction", y - p x - p y R.eval "r <- cor(-log(measurement),-log(prediction),use='complete')" r = R.eval("r").to_ruby |