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authorChristoph Helma <helma@in-silico.ch>2015-08-27 20:28:25 +0200
committerChristoph Helma <helma@in-silico.ch>2015-08-27 20:28:25 +0200
commit66c34e4682965272060a121b6e362af67ed4be5f (patch)
tree61350c4ada8cbb6ca724f3af221f229ffcd70560 /lib/regression.rb
parentd542e9fe92567c54423f39904111bd5293236416 (diff)
Initial GUI for Nestec models
Diffstat (limited to 'lib/regression.rb')
-rw-r--r--lib/regression.rb5
1 files changed, 3 insertions, 2 deletions
diff --git a/lib/regression.rb b/lib/regression.rb
index 020bb3a..2580a1e 100644
--- a/lib/regression.rb
+++ b/lib/regression.rb
@@ -19,9 +19,10 @@ module OpenTox
class Regression
- def self.weighted_average compound, neighbors
+ def self.weighted_average compound, params
weighted_sum = 0.0
sim_sum = 0.0
+ neighbors = params[:neighbors]
neighbors.each do |row|
n,sim,acts = row
acts.each do |act|
@@ -29,7 +30,7 @@ module OpenTox
sim_sum += sim
end
end
- confidence = sim_sum/neighbors.size.to_f
+ confidence = sim_sum*neighbors.size.to_f/params[:training_dataset_size]
sim_sum == 0 ? prediction = nil : prediction = 10**(weighted_sum/sim_sum)
{:value => prediction,:confidence => confidence}
end