OT.isA substituted by RDF.type, identification of feature_types by RDF.type

1 files changed, 0 insertions, 86 deletions

diff --git a/lib/templates/config.yaml b/lib/templates/config.yaml
deleted file mode 100644
index 8a5e460..0000000
--- a/lib/templates/config.yaml
+++ /dev/null
@@ -1,86 +0,0 @@
-# Example configuration for OpenTox, please adjust to your settings
-# 
-# Database setup:
-#
-# Example MySql:
-#
-:database: 
-  :adapter:  mysql
-  :database: production
-  :username: root
-  :password: opentox
-  :host:     localhost
-#
-# Example 1: Using external test services
-#
-# :services:
-#  opentox-compound:      "http://webservices.in-silico.ch/compound/"
-#  opentox-dataset:       "http://webservices.in-silico.ch/dataset/"
-#  opentox-algorithm:     "http://webservices.in-silico.ch/algorithm/"
-#  opentox-model:         "http://webservices.in-silico.ch/model/"
-#  opentox-task:          "http://webservices.in-silico.ch/task/"
-#  opentox-validation:    "http://opentox.informatik.uni-freiburg.de/validation/"
-#
-# Example 2: Using local services
-:base_dir: /home/ist/webservices
-:webserver: passenger
-:services:
-  opentox-compound:      "http://localhost/compound/"
-  opentox-dataset:       "http://localhost/dataset/"
-  opentox-algorithm:     "http://localhost/algorithm/"
-  opentox-model:         "http://localhost/model/"
-  opentox-task:          "http://localhost/task/"
-  opentox-validation:    "http://localhost/validation/"
-#
-# Yaml capable hosts (faster than OWL-DL)
-#
-:yaml_hosts:
-  - "localhost"
-
-# Uncomment for verbose logging
-# :logger: debug
-# :backtrace: 1
-  
-  
-# OpenSSO Authorization
-# set ":server: " to disable A&A
-:authorization:
-  :server: "https://opensso.in-silico.ch"
-  :free_request: #request-method not controlled by A&A
-    - "GET"
-  :authenticate_request: #only for authenticated user
-    - "POST"
-  :authorize_request:  #only for authenticated and authorizeduser
-    - "DELETE"
-    - "PUT"
-  # Exceptions:
-  :free_uris: #request-method for uri not controlled by A&A
-    ? - :GET
-    : - !ruby/regexp /localhost\/algorithm/
-      - "http://localhost/dataset"
-      - "http://localhost/model"
-      - "http://localhost/validation"
-      - "http://localhost/validation/crossvalidation"
-      - "http://localhost/validation/reach_report"      
-      - "http://localhost/validation/reach_report/crossvalidation"
-      - "http://localhost/validation/report"   
-      - "http://localhost/validation/report/crossvalidation"
-      - "http://localhost/validation/reach_report/qmrf"
-    ? - :GET
-      - :POST
-    : - !ruby/regexp /localhost\/toxcreate/
-      - !ruby/regexp /localhost\/task/
-      - !ruby/regexp /localhost\/compound/
-    ? - :PUT
-    : - !ruby/regexp /localhost\/task/
-
-  :authorize_exceptions: #request-method for uri only authenticated, no authorization
-    ? - :POST
-    : - !ruby/regexp /localhost\/algorithm/
-      - "http://localhost/dataset"
-      - "http://localhost/model"
-      - "http://localhost/validation"
-      - !ruby/regexp /localhost\/validation\/[a-z,A-Z,\/,_\-]*$/
-
-  
-  
\ No newline at end of file