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authorChristoph Helma <helma@in-silico.ch>2015-08-25 17:20:55 +0200
committerChristoph Helma <helma@in-silico.ch>2015-08-25 17:20:55 +0200
commitf8faf510b4574df1a00fa61a9f0a1681fc2f4857 (patch)
treeacdbe6666ca5f528be368c6f9fdf4d7fb51d031e /test/lazar-regression.rb
parent8c6c59980bc82dc2177147f2fe34adf8bfbc1539 (diff)
Experiments added
Diffstat (limited to 'test/lazar-regression.rb')
-rw-r--r--test/lazar-regression.rb7
1 files changed, 4 insertions, 3 deletions
diff --git a/test/lazar-regression.rb b/test/lazar-regression.rb
index c36f521..4062cfd 100644
--- a/test/lazar-regression.rb
+++ b/test/lazar-regression.rb
@@ -12,11 +12,12 @@ class LazarRegressionTest < MiniTest::Test
assert_equal 1, prediction[:neighbors].size
end
- def test_weighted_average_with_relevant_fingerprints
+ def test_local_linear_regression
+ skip
training_dataset = Dataset.from_csv_file "#{DATA_DIR}/EPAFHM.medi.csv"
model = Model::LazarRegression.create training_dataset
- model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.weighted_average_with_relevant_fingerprints")
- compound = Compound.from_smiles "CC(C)(C)CN"
+ model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.local_linear_regression")
+ compound = Compound.from_smiles "NC(=O)OCCC"
prediction = model.predict compound
p prediction
#assert_equal 13.6, prediction[:value].round(1)