diff options
author | Christoph Helma <helma@in-silico.ch> | 2015-08-25 17:20:55 +0200 |
---|---|---|
committer | Christoph Helma <helma@in-silico.ch> | 2015-08-25 17:20:55 +0200 |
commit | f8faf510b4574df1a00fa61a9f0a1681fc2f4857 (patch) | |
tree | acdbe6666ca5f528be368c6f9fdf4d7fb51d031e /test/lazar-regression.rb | |
parent | 8c6c59980bc82dc2177147f2fe34adf8bfbc1539 (diff) |
Experiments added
Diffstat (limited to 'test/lazar-regression.rb')
-rw-r--r-- | test/lazar-regression.rb | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/test/lazar-regression.rb b/test/lazar-regression.rb index c36f521..4062cfd 100644 --- a/test/lazar-regression.rb +++ b/test/lazar-regression.rb @@ -12,11 +12,12 @@ class LazarRegressionTest < MiniTest::Test assert_equal 1, prediction[:neighbors].size end - def test_weighted_average_with_relevant_fingerprints + def test_local_linear_regression + skip training_dataset = Dataset.from_csv_file "#{DATA_DIR}/EPAFHM.medi.csv" model = Model::LazarRegression.create training_dataset - model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.weighted_average_with_relevant_fingerprints") - compound = Compound.from_smiles "CC(C)(C)CN" + model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.local_linear_regression") + compound = Compound.from_smiles "NC(=O)OCCC" prediction = model.predict compound p prediction #assert_equal 13.6, prediction[:value].round(1) |