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author | Christoph Helma <helma@in-silico.ch> | 2016-02-09 11:04:00 +0100 |
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committer | Christoph Helma <helma@in-silico.ch> | 2016-02-09 11:04:00 +0100 |
commit | f61b7d3c65d084747dc1bf87214e5ec0c57326be (patch) | |
tree | 2b647dbdb563a18d4f3140cdcc26f6233e4b2fbd /test/lazar-regression.rb | |
parent | d6eced29e104b9bc1923b2ac89b2700a48adf07a (diff) |
pls regression
Diffstat (limited to 'test/lazar-regression.rb')
-rw-r--r-- | test/lazar-regression.rb | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/test/lazar-regression.rb b/test/lazar-regression.rb index c1dc9b9..9ade6d5 100644 --- a/test/lazar-regression.rb +++ b/test/lazar-regression.rb @@ -21,14 +21,15 @@ class LazarRegressionTest < MiniTest::Test assert_equal 3, prediction[:neighbors].size end - def test_local_linear_regression - skip + def test_local_pls_regression training_dataset = Dataset.from_csv_file "#{DATA_DIR}/EPAFHM.medi.csv" model = Model::LazarRegression.create training_dataset - model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.local_linear_regression") compound = Compound.from_smiles "NC(=O)OCCC" prediction = model.predict compound p prediction + model.update(:prediction_algorithm => "OpenTox::Algorithm::Regression.local_pls_regression") + prediction = model.predict compound + p prediction #assert_equal 13.6, prediction[:value].round(1) #assert_equal 0.83, prediction[:confidence].round(2) #assert_equal 1, prediction[:neighbors].size |