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author | Christoph Helma <helma@in-silico.ch> | 2016-02-29 16:48:28 +0100 |
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committer | Christoph Helma <helma@in-silico.ch> | 2016-02-29 16:48:28 +0100 |
commit | de4ab84e79ba142b3fc92566c98751a1b90d0a3b (patch) | |
tree | 273efa1ff09a91d6d30e391637359050a980c04d /paper/test-validation.rb | |
parent | 3c1e3821db9a7ffe813621872a8ba253a09de77c (diff) |
validation fixed, more regression models
Diffstat (limited to 'paper/test-validation.rb')
-rw-r--r-- | paper/test-validation.rb | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/paper/test-validation.rb b/paper/test-validation.rb index b748a8d..5edd6e6 100644 --- a/paper/test-validation.rb +++ b/paper/test-validation.rb @@ -1,10 +1,12 @@ require_relative "include.rb" -test = Dataset.from_csv_file(File.join(DATA,"common-test.csv")) +test = Dataset.from_csv_file(File.join(DATA,"test.csv")) file = File.join(DATA,ARGV[0]) dataset = Dataset.from_csv_file file -model = Model::LazarRegression.create dataset +model = Model::LazarRegression.create(dataset, :prediction_algorithm => "OpenTox::Algorithm::Regression.local_physchem_regression") +#model = Model::LazarRegression.create(dataset, :prediction_algorithm => "OpenTox::Algorithm::Regression.local_fingerprint_regression") +#model = Model::LazarRegression.create(dataset, :prediction_algorithm => "OpenTox::Algorithm::Regression.local_weighted_average") validation = RegressionValidation.create model, dataset, test csv_file = file.sub(".csv","-test-predictions.csv") id_file = file.sub(".csv","-test-predictions.id") |