diff options
Diffstat (limited to 'create_nestec_models.rb')
-rw-r--r-- | create_nestec_models.rb | 32 |
1 files changed, 0 insertions, 32 deletions
diff --git a/create_nestec_models.rb b/create_nestec_models.rb deleted file mode 100644 index bfcf468..0000000 --- a/create_nestec_models.rb +++ /dev/null @@ -1,32 +0,0 @@ -require_relative '../lazar/lib/lazar' -include OpenTox -#$mongo.database.drop -#$gridfs = $mongo.database.fs # recreate GridFS indexes -#=begin -[ - #"Rat_TD50.csv", - #"Mouse_TD50.csv", - #"LOAEL_mg_corrected_smiles_mmol.csv", - #"swissRat_chron_LOAEL_mmol.csv", - #"LOAEL-rat-combined.csv", - "LOAEL-rat-combined_median.csv", - #"LOAEL_mmol_corrected_smiles.csv", - #"swissMouse_chron_LOAEL_mmol.csv", - #"swissMultigen_LOAEL_mmol.csv", - #"swissRat_chron_LOAEL_mmol.csv", - -].each do |file| - file = File.join(File.dirname(__FILE__),"regression",file) - params = { - :prediction_algorithm => "OpenTox::Algorithm::Regression.local_pls_regression", - } - dataset = Dataset.from_csv_file file - model = Model::LazarRegression.create dataset, params - cv = RegressionCrossValidation.create model - puts cv.to_yaml - #Model::Prediction.from_csv_file file, params - #model = Model::LazarRegression.create dataset, params -end -#=end -#`mongodump -h 127.0.0.1 -d production` -#`mongorestore --host 127.0.0.1` |